Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq52 738 0.0 >seq52 Length=149364 Score = 738 bits (818), Expect = 0.0 Identities = 749/973 (77%), Gaps = 2/973 (0%) Strand=Plus/Minus Query 180980 TTTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACT 181039 ||| || |||||||||||| || | ||||| | || |||||||||| || || | Sbjct 86190 TTTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTT 86131 Query 181040 GATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTC 181098 ||||| || ||| | || |||| ||| || || || ||| |||| || |||| |||| Sbjct 86130 AATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTC 86072 Query 181099 CCCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACA 181158 | ||||| || ||||| || |||||||| || || | |||||| | | ||||| |||| Sbjct 86071 CGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACA 86012 Query 181159 ACATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCA 181218 | |||||| ||||||| || ||||| |||| ||||| || ||| | |||||||| || | Sbjct 86011 ATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAA 85952 Query 181219 TCTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAG 181278 | |||||||| || || |||||||||||| | || || |||||||||| |||||| | | Sbjct 85951 TTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCG 85892 Query 181279 TCTTTCACTTCCTTATCGGCATTTATGCATACATGGGACGTGAATGGGAACTCTCTTACC 181338 | | || ||| | | ||| ||| | |||||||||| ||||| |||||| | |||| | Sbjct 85891 TTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTC 85832 Query 181339 GCTTAGGTATGCGCCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCAGCAGCATCTG 181398 | ||||||||||| || |||||| ||||| ||||| || ||||| || ||||| | | Sbjct 85831 GTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAG 85772 Query 181399 CTGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCA 181458 |||||||| | | ||||| |||||||||||||||||||||| | ||||| | || | Sbjct 85771 CTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTA 85712 Query 181459 TCTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATTCTGATGCATC 181518 |||||||||| ||||||| |||| | || |||||||| ||||||||||| || ||||| | Sbjct 85711 TCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACC 85652 Query 181519 CCTTCCACATGTTGGGTGTCGCAGGTGTATTTGGTGGTTCACTGTTCAGTGCAATGCACG 181578 | ||||| ||| | ||||| || |||||||||||||||||| | ||| ||| ||||||| Sbjct 85651 CATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACG 85592 Query 181579 GTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATG 181638 |||| | || || ||||| | | ||||| || ||||||| || ||| ||| | | Sbjct 85591 GTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAG 85532 Query 181639 GTTACAAGTTCGGACAAGAAGAAGAGACATACAACATCGTCGCCGCCCACGGTTACTTTG 181698 ||||||| ||||| ||||||||||| || ||||||||||| || || || || ||||| | Sbjct 85531 GTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCG 85472 Query 181699 GTCGCTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCG 181758 |||| || || |||||||||||||| ||||||||||| |||||| | || |||||| | | Sbjct 85471 GTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAG 85412 Query 181759 CAGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTA 181818 | || ||||| || ||||| || |||||||| || | || | || |||||||| | Sbjct 85411 CTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCA 85352 Query 181819 ACCTCAATGGATTCAACTTCAACCAGTCTATCCTCGACGGACAAGGACGTGTCCTCAACA 181878 || | ||||| |||||||||||||| || | | || |||||| ||||| |||||| Sbjct 85351 ACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACA 85292 Query 181879 CCTGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACG 181938 | ||||||||| | ||||||||||| || || |||||||| ||||| ||||| |||| Sbjct 85291 CTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 85232 Query 181939 CGCACAACTTCCC 181951 | ||||||||||| Sbjct 85231 CTCACAACTTCCC 85219 Score = 352 bits (390), Expect = 3e-92 Identities = 506/708 (71%), Gaps = 4/708 (1%) Strand=Plus/Minus Query 182355 GGGTGGTTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGG 182414 || ||||| ||||| | || |||||| || || || || || |||||| | || ||| Sbjct 18098 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 18039 Query 182415 TCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACA 182474 || || | || | | || || || || || || |||| |||||| |||| || || Sbjct 18038 TCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACT 17979 Query 182475 GCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAAC 182534 | ||||| ||| |||||| || || ||| | || ||||| ||| | ||||| ||| Sbjct 17978 ACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA- 17920 Query 182535 TTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 182593 ||||||| | |||||||| || || || || || ||||||||||||| | | | || Sbjct 17919 TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCT 17860 Query 182594 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAA 182653 |||||| || || |||| || ||||| || ||||| |||||||| || || |||| Sbjct 17859 TTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGAC 17800 Query 182654 TTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACT 182713 || || ||||| |||||||| || ||||| |||||||| |||||| | || |||||| | Sbjct 17799 GTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAAT 17740 Query 182714 TGCTCGCCTGATTGGA-ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTG 182772 ||| || | | | | || | |||||||| || ||||| ||||| | || ||| ||| Sbjct 17739 TGCACG-TTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTG 17681 Query 182773 TATTCGTCAGTGTGTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGT 182832 ||||||| ||| ||| | || || ||||| ||||| || |||||| || || || Sbjct 17680 TATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAA 17621 Query 182833 CCTTTGGTGTCGCGGCGATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGA 182892 ||||||||| || || || ||| | ||| | || ||| | || |||||||| ||||||| Sbjct 17620 GCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGA 17561 Query 182893 CACTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTG 182952 | | ||||| |||||||||||||| || || ||| |||| || | || || || ||| Sbjct 17560 CTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTG 17501 Query 182953 CTATCCATGGTGTCACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACAT 183012 | || ||||| | || ||||| ||||| | | ||| ||||| || |||||||||| Sbjct 17500 CAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACAT 17441 Query 183013 TTAAAGCGTTCGATTCCACTCAGGAGGAGGAGACCTATTCGATGGTTA 183060 | || || | | ||||| | || || || || || ||||||| Sbjct 17440 TCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 17393 Score = 352 bits (390), Expect = 3e-92 Identities = 506/708 (71%), Gaps = 4/708 (1%) Strand=Plus/Minus Query 182355 GGGTGGTTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGG 182414 || ||||| ||||| | || |||||| || || || || || |||||| | || ||| Sbjct 147543 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 147484 Query 182415 TCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACA 182474 || || | || | | || || || || || || |||| |||||| |||| || || Sbjct 147483 TCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACT 147424 Query 182475 GCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAAC 182534 | ||||| ||| |||||| || || ||| | || ||||| ||| | ||||| ||| Sbjct 147423 ACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA- 147365 Query 182535 TTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 182593 ||||||| | |||||||| || || || || || ||||||||||||| | | | || Sbjct 147364 TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCT 147305 Query 182594 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAA 182653 |||||| || || |||| || ||||| || ||||| |||||||| || || |||| Sbjct 147304 TTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGAC 147245 Query 182654 TTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACT 182713 || || ||||| |||||||| || ||||| |||||||| |||||| | || |||||| | Sbjct 147244 GTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAAT 147185 Query 182714 TGCTCGCCTGATTGGA-ATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTG 182772 ||| || | | | | || | |||||||| || ||||| ||||| | || ||| ||| Sbjct 147184 TGCACG-TTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTG 147126 Query 182773 TATTCGTCAGTGTGTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGT 182832 ||||||| ||| ||| | || || ||||| ||||| || |||||| || || || Sbjct 147125 TATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAA 147066 Query 182833 CCTTTGGTGTCGCGGCGATCTTCAGGTTCCTGTTGTTCCTTCAGGGTTTCCACAACTGGA 182892 ||||||||| || || || ||| | ||| | || ||| | || |||||||| ||||||| Sbjct 147065 GCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGA 147006 Query 182893 CACTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGTGGAGCACTGCTCAGTG 182952 | | ||||| |||||||||||||| || || ||| |||| || | || || || ||| Sbjct 147005 CTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTG 146946 Query 182953 CTATCCATGGTGTCACAGTAGAGAATACCTTGTATGAAGATGGAGAACAGGCAAACACAT 183012 | || ||||| | || ||||| ||||| | | ||| ||||| || |||||||||| Sbjct 146945 CAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACAT 146886 Query 183013 TTAAAGCGTTCGATTCCACTCAGGAGGAGGAGACCTATTCGATGGTTA 183060 | || || | | ||||| | || || || || || ||||||| Sbjct 146885 TCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGTTA 146838 Score = 196 bits (216), Expect = 6e-45 Identities = 234/315 (74%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 183060 ACAGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTG 183119 || || |||||||| ||||||||||| || || || || ||| ||||| |||||||| Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 183120 CACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATT 183179 |||||||||||||| |||||||| || | ||||||||| | | | ||||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 183180 GGGCTTGCTCTTAATCTT-CGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGA 183238 || | ||| |||| ||| ||||| |||||||| || ||||| ||| | || || || Sbjct 16228 GGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGA 16170 Query 183239 AGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGC 183298 ||||||||| || || || ||||| ||||| || || ||| | || ||||| | ||||| Sbjct 16169 AGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGC 16110 Query 183299 TTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACC 183358 |||| |||| || ||||| || |||||||| | | |||||||| || ||| |||| Sbjct 16109 TTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACC 16050 Query 183359 TAGAGGTAACGCACT 183373 | || ||||| || Sbjct 16049 ACGTGGAAACGCTCT 16035 Score = 196 bits (216), Expect = 6e-45 Identities = 234/315 (74%), Gaps = 2/315 (1%) Strand=Plus/Minus Query 183060 ACAGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGTTG 183119 || || |||||||| ||||||||||| || || || || ||| ||||| |||||||| Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 183120 CACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGGATCATT 183179 |||||||||||||| |||||||| || | ||||||||| | | | ||||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 183180 GGGCTTGCTCTTAATCTT-CGTGCTTATGATTTTGTGAGTCAAGAGATTAGAGCAGCAGA 183238 || | ||| |||| ||| ||||| |||||||| || ||||| ||| | || || || Sbjct 145673 GGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGA 145615 Query 183239 AGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAATGAAGGACTACGTGC 183298 ||||||||| || || || ||||| ||||| || || ||| | || ||||| | ||||| Sbjct 145614 AGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGC 145555 Query 183299 TTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCCTGAAGAAGTTCTACC 183358 |||| |||| || ||||| || |||||||| | | |||||||| || ||| |||| Sbjct 145554 TTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACC 145495 Query 183359 TAGAGGTAACGCACT 183373 | || ||||| || Sbjct 145494 ACGTGGAAACGCTCT 145480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614615287501280