Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq52 753 0.0 >seq52 Length=149364 Score = 753 bits (834), Expect = 0.0 Identities = 789/1034 (76%), Gaps = 7/1034 (1%) Strand=Plus/Minus Query 177849 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTG 177908 || || |||||||||||| || | ||||| | || |||||||||| || || | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 177909 ATGATTCCAACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCC 177967 ||||| || ||| | || |||| ||| || || || ||| |||| || |||| ||||| Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTCC 86071 Query 177968 CCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGCAACAA 178027 ||||| || ||||| || |||||||| || || | |||||| | | ||||| ||||| Sbjct 86070 GCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAA 86011 Query 178028 CATCATCTCTGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 178087 |||||| ||||||| || ||||| |||| ||||| || ||| | |||||||| || || Sbjct 86010 TATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAAT 85951 Query 178088 CTGGGAAGCCGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGT 178147 |||||||| || || |||||||||||| | || || |||||||||| |||||| | || Sbjct 85950 TTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGT 85891 Query 178148 ATTTCACTTCCTCATTGGTATCTATGCATACATGGGACGTGAGTGGGAACTTTCATACCG 178207 | || ||| || | || | | | |||||||||| |||||||||||| | || | || Sbjct 85890 TTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCG 85831 Query 178208 TTTAGGTATGCGCCCCTGGATCTGTGTAGCATACTCTGCTCCAGTAGCAGCAGCATCGGC 178267 |||||||||||| || |||||| || || ||||| || ||||| || ||||| | || Sbjct 85830 TTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 85771 Query 178268 AGTATTCCTGGTCTATCCTTTCGGTCAAGGTTCATTTTCTGACGCAATGCCACTTGGCAT 178327 |||||| | | ||||| ||||||||||||| || ||||| | ||||| | || || Sbjct 85770 TGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 85711 Query 178328 CTCTGGTACATTCAACTACATGCTTGTTTTCCAAGCAGAACACAACATTCTGATGCACCC 178387 ||||||||| ||||||| |||| | || |||||||| || |||||||| || |||||||| Sbjct 85710 CTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 85651 Query 178388 CTTCCACATGTTGGGTGTCGCAGGTGTATTCGGTGGTTCACTGTTCAGTGCAATGCACGG 178447 ||||| ||| | ||||| || |||||||| ||||||||| | ||| ||| |||||||| Sbjct 85650 ATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGG 85591 Query 178448 TTCTTTGGTTACATCTTCACTCGTTCGTGAAACGACTGAAACAGAATCACAGAACTATGG 178507 ||| | || || ||||| | |||||||||| ||||||| |||||| ||| | || Sbjct 85590 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGG 85531 Query 178508 TTATAAGTTCGGACAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGG 178567 ||| || ||||| ||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct 85530 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 85471 Query 178568 TCGTTTGATCTTCCAATATGCTTCATTCAACAACTCACGTTCACTGCACTTCTTCCTCGC 178627 |||||| || |||||||||||||| ||||||||||| |||||| | || |||||| | || Sbjct 85470 TCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGC 85411 Query 178628 AGCATGGCCTGTAGTTGGAATCTGGTTCACCGCACTGGGCGTAAGCACCATGGCATTTAA 178687 || ||||| || ||||| || |||||||| || | || | || |||||||| || Sbjct 85410 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 85351 Query 178688 CCTCAATGGATTCAACTTCAACCAGTCCATCCTCGACGGACAAGGACGTGTCCTCAACAC 178747 | | ||||| |||||||||||||| || | | || |||||| ||||| ||||||| Sbjct 85350 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 85291 Query 178748 ATGGGCAGACGTGCTCAACCGTGCCGGTCTCGGCATGGAAGTCATGCACGAGCGCAACGC 178807 ||||||||| | ||||||||||| || || |||||||| ||||| ||||| ||||| Sbjct 85290 TTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 85231 Query 178808 GCACAACTTCCCGCTTGATCTTGCAGCAGCTGAGTCCACACCTGTGGCCTTAATTGCTCC 178867 ||||||||||| | ||| | || | | ||| | || ||| ||||| ||| Sbjct 85230 TCACAACTTCCCATTAGATTTAGCTGTTGTTGAAGCTCCAGCTG-----TTAATGGCTAA 85176 Query 178868 TTCTGTCGGTTGAT 178881 ||||||| | |||| Sbjct 85175 TTCTGTCTGATGAT 85162 Score = 331 bits (366), Expect = 1e-85 Identities = 498/705 (71%), Gaps = 2/705 (0%) Strand=Plus/Minus Query 179217 GGGTGGTTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGG 179276 || ||||| ||||| | || |||||| || || || || || |||||| | || ||| Sbjct 18098 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 18039 Query 179277 TCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACA 179336 || || | || | | || || || || || || |||| |||||| |||| || || Sbjct 18038 TCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACT 17979 Query 179337 GCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAAC 179396 | ||||| ||| |||||| || || ||| | || ||| ||| | || || ||| Sbjct 17978 ACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA- 17920 Query 179397 TTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 179455 ||||||| | |||||||| || || || || || ||||||||||||| | | | || Sbjct 17919 TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCT 17860 Query 179456 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAA 179515 |||||| || || |||| || ||||| || ||||| |||||||| || || |||| Sbjct 17859 TTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGAC 17800 Query 179516 TTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACT 179575 || || ||||| |||||||| || ||||| |||||||| |||||| | || |||||| | Sbjct 17799 GTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAAT 17740 Query 179576 TGCTCGCCTGATTGGTATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGT 179635 ||| || | || | |||||||| || ||||| ||||| | || ||| |||| Sbjct 17739 TGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTGT 17680 Query 179636 ATTCGTCAGTGTTTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTC 179695 |||||| ||| ||| | || || ||||| ||||| || |||||| || || || Sbjct 17679 ATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAAG 17620 Query 179696 CTTTGGTGTCGCGGCGATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGAC 179755 ||||||||| || || || ||| | ||| | | ||| | || |||||||| |||||||| Sbjct 17619 CTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGAC 17560 Query 179756 GCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGC 179815 | ||||| |||||||||||||| || || ||| |||| |||| || || || |||| Sbjct 17559 TTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTGC 17500 Query 179816 TATCCATGGAGTTACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTT 179875 || ||||| | |||||||| ||||| | | ||| ||||| || ||||| || || Sbjct 17499 AATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACATT 17440 Query 179876 TAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGT 179920 || ||| | | || || | ||||| || || || ||||| Sbjct 17439 CCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 17395 Score = 331 bits (366), Expect = 1e-85 Identities = 498/705 (71%), Gaps = 2/705 (0%) Strand=Plus/Minus Query 179217 GGGTGGTTCGATGTCCTGGACGACTGGGTTAAACGGGATCGCTTTGTCTTTGTGGGTTGG 179276 || ||||| ||||| | || |||||| || || || || || |||||| | || ||| Sbjct 147543 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 147484 Query 179277 TCTGGACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGGACA 179336 || || | || | | || || || || || || |||| |||||| |||| || || Sbjct 147483 TCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACT 147424 Query 179337 GCTTTTGTTACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTATCTTGAGGGTGCTAAC 179396 | ||||| ||| |||||| || || ||| | || ||| ||| | || || ||| Sbjct 147423 ACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA- 147365 Query 179397 TTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 179455 ||||||| | |||||||| || || || || || ||||||||||||| | | | || Sbjct 147364 TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCT 147305 Query 179456 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTCTGGAA 179515 |||||| || || |||| || ||||| || ||||| |||||||| || || |||| Sbjct 147304 TTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGAC 147245 Query 179516 TTTCGTGGCTCTCCACGGTGCCTTCGCTCTCATTGGTTTCATGCTTAGGCAATTTGAACT 179575 || || ||||| |||||||| || ||||| |||||||| |||||| | || |||||| | Sbjct 147244 GTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAAT 147185 Query 179576 TGCTCGCCTGATTGGTATCAGACCTTACAATGCGATTGCTTTTTCTGGTCCTATTGCTGT 179635 ||| || | || | |||||||| || ||||| ||||| | || ||| |||| Sbjct 147184 TGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTGT 147125 Query 179636 ATTCGTCAGTGTTTTCCTCATCTATCCTTTGGGACAGTCCTCTTGGTTTTTCGCGCCGTC 179695 |||||| ||| ||| | || || ||||| ||||| || |||||| || || || Sbjct 147124 ATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAAG 147065 Query 179696 CTTTGGTGTCGCGGCGATCTTCAGGTTCTTGCTGTTCCTTCAGGGTTTCCACAACTGGAC 179755 ||||||||| || || || ||| | ||| | | ||| | || |||||||| |||||||| Sbjct 147064 CTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGAC 147005 Query 179756 GCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTGCTCAGTGC 179815 | ||||| |||||||||||||| || || ||| |||| |||| || || || |||| Sbjct 147004 TTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTGC 146945 Query 179816 TATCCATGGAGTTACTGTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAATACCTT 179875 || ||||| | |||||||| ||||| | | ||| ||||| || ||||| || || Sbjct 146944 AATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACATT 146885 Query 179876 TAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGT 179920 || ||| | | || || | ||||| || || || ||||| Sbjct 146884 CCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 146840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 606007319888880