Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_027132.1 Length=190768 Score E Sequences producing significant alignments: (Bits) Value seq52 818 0.0 >seq52 Length=149364 Score = 818 bits (906), Expect = 0.0 Identities = 786/1005 (78%), Gaps = 2/1005 (0%) Strand=Plus/Minus Query 178861 TTCTGCGAGTGGGTAACGTCCACCAACAATCGTTTGTATGTTGGTTGGTTCGGTGTGCTG 178920 || || ||||||||||| ||| | || ||||| || | |||||||| |||||| | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 178921 ATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 178979 ||||| ||||| || | | || ||| || || || ||| | || || | ||||| || Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTCC 86071 Query 178980 TCCCGTCGATATTGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGAAACAA 179039 || |||||||| || || |||||||| || || | |||||| | | ||||||||||| Sbjct 86070 GCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAA 86011 Query 179040 CATCATCTCTGGTGCTGTTGTCCCAAGTTCAAACGCAATTGGTCTACACTTCTACCCCAT 179099 |||||| |||||||| || | |||| ||| ||||| || ||| ||||||||||||| || Sbjct 86010 TATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAAT 85951 Query 179100 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTGGTAGT 179159 ||||||||||| || || ||||||||| | || || |||||||||| |||||| | || Sbjct 85950 TTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGT 85891 Query 179160 CTTCCACTTCCTTATCGGCATCTATGCCTATATGGGACGTGAGTGGGAACTTTCTTACCG 179219 | ||| ||| | | ||| | | | | || ||||| |||||||||||| | |||| || Sbjct 85890 TTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCG 85831 Query 179220 TCTAGGTATGCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCTGCGAGTGC 179279 | ||||||||||||| |||||| ||||| ||||| |||||||| ||||| || | || Sbjct 85830 TTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 85771 Query 179280 AGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCTATGCCTCTTGGTAT 179339 |||||| || | ||||| |||||||||||||||||||||||| ||||||| | ||||| Sbjct 85770 TGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 85711 Query 179340 CTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACACAACATCCTTATGCACCC 179399 |||||||||||| |||| |||| | ||||||||||| || |||||||||||||||||||| Sbjct 85710 CTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 85651 Query 179400 GTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 179459 ||||||||||| ||||||||||| ||||| ||||| || | ||||||||||||||||| Sbjct 85650 ATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGG 85591 Query 179460 AAGTCTCGTTACTTCCTCGCTTGTTCGTGAAACAACTGAGACAGAGTCACAGAACTATGG 179519 || || ||||| || | |||||||||||||||| | || ||| ||| | || Sbjct 85590 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGG 85531 Query 179520 TTATAAGTTCGGACAAGAAGAAGAGACCTATAACATCGTCGCAGCACATGGCTACTTCGG 179579 ||| || ||||| ||||||||||| || || |||||||| ||||| |||||||||||||| Sbjct 85530 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 85471 Query 179580 TCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTTTGCACTTCTTCCTTGC 179639 |||||| || ||||||||||| || || |||||||| || || || || |||||| | || Sbjct 85470 TCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGC 85411 Query 179640 TGCGTGGCCGGTTGTCGGCATCTGGTTCACTGCTCTTGGCGTGTCAACCATGGCGTTCAA 179699 ||| ||||| ||||| || || |||||||||||| | || | ||||| ||||| ||||| Sbjct 85410 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 85351 Query 179700 CCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGACGGTCAAGGACGTGTCCTTAACAC 179759 | | || ||||||||||||||||| || | | || ||||| ||||| | ||||| Sbjct 85350 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 85291 Query 179760 ATGGGCGGACGTATTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCATGAGCGTAACGC 179819 ||||| ||| | | |||||||| | ||||||||||| ||||||||||||||||| Sbjct 85290 TTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 85231 Query 179820 ACACAACTTCCCACTCGACCTTGCTGCTGCTGAGTCTACACCTGT 179864 |||||||||||| | || | |||| || ||| || || |||| Sbjct 85230 TCACAACTTCCCATTAGATTTAGCTGTTGTTGAAGCTCCAGCTGT 85186 Score = 358 bits (396), Expect = 8e-94 Identities = 504/705 (71%), Gaps = 2/705 (0%) Strand=Plus/Minus Query 180015 GGGTGGTTCGATGTCCTGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGG 180074 || ||||| ||||| | || ||||||||| || ||||| || || ||| | || ||| Sbjct 18098 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 18039 Query 180075 TCTGGACTACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACA 180134 || || || || | | || || || || || || |||| |||||| |||| || || Sbjct 18038 TCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACT 17979 Query 180135 GCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAAC 180194 | ||||| ||| |||||| || || ||| | || ||||| ||| | ||||| ||| Sbjct 17978 ACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA- 17920 Query 180195 TTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACT 180253 ||||||| | |||||||| || || || || | ||||||||||||| | | | || Sbjct 17919 TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCT 17860 Query 180254 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAA 180313 |||||| || || |||| || ||||| ||| ||||| |||||||| || || |||| Sbjct 17859 TTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGAC 17800 Query 180314 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACT 180373 || || ||||| |||||||| || || || ||||| |||||||| || ||||||||| | Sbjct 17799 GTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAAT 17740 Query 180374 GGCACGTCTTATTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGT 180433 |||||| | || || |||||||| || |||||||| || | || || |||| Sbjct 17739 TGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTGT 17680 Query 180434 ATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTC 180493 ||| || ||||| | || ||||| | || || || ||||||||||||| || Sbjct 17679 ATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAAG 17620 Query 180494 TTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTTCAGGGTTTCCACAACTGGAC 180553 ||||| || || ||||| || ||||| | | || | || |||||||| |||||||| Sbjct 17619 CTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGAC 17560 Query 180554 CCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGC 180613 | ||||| |||||||||||||| || || ||| |||| || | || | || | || Sbjct 17559 TTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTGC 17500 Query 180614 AATCCATGGCGTAACTGTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCTT 180673 ||| ||||||| |||||| || || || || | ||| ||||| || |||||||| || Sbjct 17499 AATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACATT 17440 Query 180674 TAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTACTCTATGGT 180718 || ||| | |||| |||| || ||||| ||||| ||||| Sbjct 17439 CCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 17395 Score = 358 bits (396), Expect = 8e-94 Identities = 504/705 (71%), Gaps = 2/705 (0%) Strand=Plus/Minus Query 180015 GGGTGGTTCGATGTCCTGGACGACTGGCTTAAACGCGACCGCTTTGTATTTGTGGGCTGG 180074 || ||||| ||||| | || ||||||||| || ||||| || || ||| | || ||| Sbjct 147543 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 147484 Query 180075 TCTGGACTACTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACA 180134 || || || || | | || || || || || || |||| |||||| |||| || || Sbjct 147483 TCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAACT 147424 Query 180135 GCTTTTGTCACGAGTTGGTACACCCACGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAAC 180194 | ||||| ||| |||||| || || ||| | || ||||| ||| | ||||| ||| Sbjct 147423 ACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA- 147365 Query 180195 TTTCTTA-CGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACT 180253 ||||||| | |||||||| || || || || | ||||||||||||| | | | || Sbjct 147364 TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCT 147305 Query 180254 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAACGGTGGTGCCAACTTGGGGGACTCTGGAA 180313 |||||| || || |||| || ||||| ||| ||||| |||||||| || || |||| Sbjct 147304 TTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGAC 147245 Query 180314 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGATTTATGCTACGCCAGTTTGAACT 180373 || || ||||| |||||||| || || || ||||| |||||||| || ||||||||| | Sbjct 147244 GTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAAT 147185 Query 180374 GGCACGTCTTATTGGTATCCGTCCTTACAATGCTATTGCATTCTCTGGTCCTATCGCTGT 180433 |||||| | || || |||||||| || |||||||| || | || || |||| Sbjct 147184 TGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTGT 147125 Query 180434 ATTTGTCAGCGTATTTCTCATCTACCCACTGGGTCAGTCCAGTTGGTTCTTTGCTCCCTC 180493 ||| || ||||| | || ||||| | || || || ||||||||||||| || Sbjct 147124 ATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAAG 147065 Query 180494 TTTTGGGGTAGCAGCAATCTTTAGATTCCTACTCTTTCTTCAGGGTTTCCACAACTGGAC 180553 ||||| || || ||||| || ||||| | | || | || |||||||| |||||||| Sbjct 147064 CTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGAC 147005 Query 180554 CCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCATTGCTATCAGC 180613 | ||||| |||||||||||||| || || ||| |||| || | || | || | || Sbjct 147004 TTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTGC 146945 Query 180614 AATCCATGGCGTAACTGTGGAGAACACACTGTATGAAGATGGAGAACAAGCAAACACCTT 180673 ||| ||||||| |||||| || || || || | ||| ||||| || |||||||| || Sbjct 146944 AATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACATT 146885 Query 180674 TAAGGCATTTGATTCAACGCAAGAGGAGGAAACTTACTCTATGGT 180718 || ||| | |||| |||| || ||||| ||||| ||||| Sbjct 146884 CCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 146840 Score = 150 bits (166), Expect = 2e-31 Identities = 220/311 (71%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 180720 ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTT 180779 |||||||| || |||||||| || || || ||| | || ||||| || || || ||| | Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 180780 CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATT 180839 || || || ||||| ||||| || || | ||||| |||| | ||||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 180840 GGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAA 180899 ||| | ||| | ||| | ||||| || |||||||| ||||| || | || || ||| Sbjct 16228 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 16169 Query 180900 GATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCA 180959 |||||||| || || || ||||| || || || || || || || ||||| | ||||| Sbjct 16168 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 16109 Query 180960 TGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCA 181019 ||| |||| || ||||| || || ||||| | | |||||||| || ||| ||||| Sbjct 16108 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 16049 Query 181020 AGAGGTAACGC 181030 | || ||||| Sbjct 16048 CGTGGAAACGC 16038 Score = 150 bits (166), Expect = 2e-31 Identities = 220/311 (71%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 180720 ACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCTAACAAGCGGTGGCTT 180779 |||||||| || |||||||| || || || ||| | || ||||| || || || ||| | Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 180780 CATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATT 180839 || || || ||||| ||||| || || | ||||| |||| | ||||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 180840 GGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAAGAGATCAGAGCAGCAGAA 180899 ||| | ||| | ||| | ||||| || |||||||| ||||| || | || || ||| Sbjct 145673 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 145614 Query 180900 GATCCTGAGTTCGAGACGTTCTACACCAAGAACATCCTATTGAATGAAGGACTACGTGCA 180959 |||||||| || || || ||||| || || || || || || || ||||| | ||||| Sbjct 145613 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 145554 Query 180960 TGGTTGGCACCTGCCGATCAACCACACGAAAACTTCATCTTCCCTGAAGAAGTTCTACCA 181019 ||| |||| || ||||| || || ||||| | | |||||||| || ||| ||||| Sbjct 145553 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 145494 Query 181020 AGAGGTAACGC 181030 | || ||||| Sbjct 145493 CGTGGAAACGC 145483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610327303634880