Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq282 100 3e-16 seq214 89.7 6e-13 >seq282 Length=165158 Score = 100 bits (110), Expect = 3e-16 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 79555 GTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCCCGTTG 79614 |||| |||||| || || |||||||| |||||||||| || |||||| || || | Sbjct 54967 GTGTCGTTGAAGACGCGCAGCATGGGGACGATGCCGTTGGAAGTGCCGTTGGTGCCCCGG 55026 Query 79615 ATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTG-GATTCCGATGCCCCCGGACCACTT 79673 || || ||| | || || ||||| | ||| | || |||||||| |||| |||| Sbjct 55027 ATGTATGACCCGGTGGCGCGGATGTT-GTGCATGGAGAGGCCGATGCCGCCGGCGGACTT 55085 Query 79674 GGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCC 79712 ||||||| |||||||||||||| || ||||||||||| Sbjct 55086 GGAGATGCAGGCGCACTCCTTGAGGGTGTCGTAGATGCC 55124 Score = 91.5 bits (100), Expect = 2e-13 Identities = 75/89 (84%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 79469 AGTCCATGATGTCGGCGTGCCACGGCTC-CAGATAGATGGCGAACGAACCCTTGCGCTTG 79527 |||| | ||||||||||||||| ||||| ||| || ||||| || | |||||||||||| Sbjct 54628 AGTCAAAGATGTCGGCGTGCCAGGGCTCGCAG-TACATGGCAAAGGCGCCCTTGCGCTTG 54686 Query 79528 CCGCCGCCCTGGTTGACGTACCGGGCCGT 79556 ||||||||||||| |||||| || || || Sbjct 54687 CCGCCGCCCTGGTCGACGTAGCGTGCTGT 54715 Score = 86.0 bits (94), Expect = 7e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 19292 GGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGG 19351 ||||||||||| || |||||||||||||| ||||||||||| |||| || ||||| Sbjct 55124 GGCATCTACGACACCCTCAAGGAGTGCGCCTGCATCTCCAAGTCCGCCGGCGGCATCGGC 55065 Query 19352 ATC-CACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGC 19410 || | ||| | || ||||| | | || || ||| || || ||||| | Sbjct 55064 CTCTCCATGCAC-AACATCCGCGCCACCGGGTCATACATCCGGGGCACCAACGGCACTTC 55006 Query 19411 CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACAC 19449 | |||| |||||||| ||||| |||||||||||| |||| Sbjct 55005 CAACGGCATCGTCCCCATGCTGCGCGTCTTCAACGACAC 54967 >seq214 Length=2433418 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 59973 TTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTC 60032 ||||| | || || | || ||||| |||||||| || ||||||||||| ||||| ||| Sbjct 799619 TTTGCCGAGCGGCTGCTGGCGTTTGCGTGCGTGGAGGGCATCTTCTTCTCCGGCTCCTTC 799678 Query 60033 TGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGC 60069 ||| | || ||||||||||| ||||| || ||||||| Sbjct 799679 TGTTCCATCTTCTGGCTCAAGAAGCGCGGTCTCATGC 799715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548522736175440