Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq282 95.1 1e-14 seq208 84.2 2e-11 >seq282 Length=165158 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 ||| | |||||||| ||||| ||||| || ||||| ||||| || || | |||||| || Sbjct 51424 GGCGTGCGCAACTCGCTGCTGGTGGCCCCCATGCCCACCGCCTCCACCTCCCAGATCCTG 51365 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCG 55587 ||||||||||| |||||||| ||||| | ||||||||| | ||||| Sbjct 51364 GGCAACAACGAATGCTTCGAGCCCTACACCTCAAACATCTACGTCCGCCG 51315 Score = 95.1 bits (104), Expect = 1e-14 Identities = 119/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGG- 53427 ||||||||||| || ||||||||||| ||| ||||||||||| | || || ||||| Sbjct 55124 GGCATCTACGACACCCTCAAGGAGTGCGCCTGCATCTCCAAGTCCGCCGGCGGCATCGGC 55065 Query 53428 -TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCG 53486 | |||| ||| | ||| |||| || | ||| || ||| ||| || |||||| Sbjct 55064 CTCTCCA-TGCAC-AACATCCGCGCCACCGGGTCATACATCCGGGGCACCAACGGCACTT 55007 Query 53487 CCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACAC 53526 || | || ||||| || ||||| |||||||||||| |||| Sbjct 55006 CCAACGGCATCGTCCCCATGCTGCGCGTCTTCAACGACAC 54967 >seq208 Length=920519 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/193 (72%), Gaps = 17/193 (9%) Strand=Plus/Minus Query 124550 CTGCTGCAACATAAGCCACATGGCT-TGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCT 124608 |||||||| ||| |||||| || | | |||||||| ||||||||||||||||||| Sbjct 616271 CTGCTGCAGCATCAGCCAC-TGCATCTCCACGTAGTCGCGCGCGTGCCCCCAGTCGCGCT 616213 Query 124609 TGGCATCCAGGTTTCCGAGCT----CGATTG--GCTTGGCCGTCTTGTTCCACTCCGCCA 124662 |||| |||||||| || || | | || ||| | || |||| | | ||||| Sbjct 616212 TGGCGTCCAGGTTGCCCAGGTACAGGCACTGCTGCTGGCCCAGCTTGATGC---GCGCCA 616156 Query 124663 AACCCAGTGTAATCTTGCGCGTCACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGT 124719 || | || |||||||| |||||||| |||| ||||| || |||||||||| Sbjct 616155 GCGCCCGAGTGATCTTGCGGGTCACAAAGGTCTCG---CCGCGCAGCGGGGACTCGTGGT 616099 Query 124720 TGAACAGAATGCC 124732 ||||||| | ||| Sbjct 616098 TGAACAGCACGCC 616086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213941099800