Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_028663.1 Length=188632 Score E Sequences producing significant alignments: (Bits) Value seq52 691 0.0 >seq52 Length=149364 Score = 691 bits (766), Expect = 0.0 Identities = 749/992 (76%), Gaps = 8/992 (1%) Strand=Plus/Minus Query 176113 TTTTGCCAGTGGGTCACCAATACAAACAACAGAATTTACGTTGGTTGGTTTGGTGTGCTC 176172 ||||| ||||||| || | || | ||| | | ||| | ||||||||||||||| | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 176173 ATGATTCCATGTCTGCTCACTGCTGCAGCATGTTTTATCGTTGCATTTATTGCAGCACCA 176232 ||||| || | | | || ||| | || |||||| | |||||||| ||||| || Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACTTCAGTATTTATCATCGCATTTATCGCAGCTCCG 86070 Query 176233 CCTGTCGATATCGACGGTATTCGCGAACCAGTAGCAGGATCTCTACTCTATGGAAACAAC 176292 |||||||||||||| ||||| || || || || |||| || |||| ||||||||||| Sbjct 86069 CCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAAT 86010 Query 176293 ATCATCTCAGGAGCAGTCGTCCCAAGCTCAAACGCAATCGGACTACACTTCTACCCAATC 176352 |||||| | || || | | |||| || ||||| ||||| |||||||||||||||| Sbjct 86009 ATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAATT 85950 Query 176353 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGAGGACCATACCAACTCGTTGTA 176412 ||||||||||| | |||| || ||| | |||||||| || || |||||||| | || Sbjct 85949 TGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGTT 85890 Query 176413 TTCCACTTCCTTATCGGTATCTCAGCTTACATGGGACGCCAATGGGAACTTAGTTACAGA 176472 | ||| ||| | | || | | | |||||||| || | |||||| | || | Sbjct 85889 TGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCGT 85830 Query 176473 CTAGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCGATGGCA 176532 |||| ||||||||||||||| ||||| ||||| |||||||| ||||||| | || Sbjct 85829 TTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGCT 85770 Query 176533 GTTTTCCTCGTCTATCCATTCGGTCAAGGATCTTTCTCTGATGGTATGCCTCTTGGCATT 176592 || ||| || | |||||| |||||||||| ||||||||||||||||||||| | || || Sbjct 85769 GTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTATC 85710 Query 176593 TCAGGTACATTCAACTTTATGTTTGTATTCCAAGCAGAGCACAACATTCTAATGCACCCA 176652 || ||||| |||||||| ||| | ||||||||||| ||||||||||| || ||||||||| Sbjct 85709 TCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCCA 85650 Query 176653 TTCCATATGCTTGGAGTAGCAGGTGTGTTTGGTGGATCTCTTTTCTCAGCAATGCACGGA 176712 |||||||||||||| || || ||||| |||||||| || | ||||| || |||||||| Sbjct 85649 TTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGGT 85590 Query 176713 AGTCTTGTTACTTCTTCACTTGTTAGAGAGACAACCGAAAACGAATCACAAAACTACGGT 176772 ||||| |||||||| | || | || ||||| |||||||||||| ||| | ||| Sbjct 85589 TCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGGT 85530 Query 176773 TACAAATTCGGACAAGAAGAAGAGACATACAACATTGTAGCTGCACACGGTTACTTTGGT 176832 ||||||||||| ||||||||||| || |||||||| || || || || || ||||| ||| Sbjct 85529 TACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGGT 85470 Query 176833 CGTCTTATCTTCCAGTATGCTTCTTTCAATAACTCAAGAAGTCTTCACTTCTTCCTTGCA 176892 ||| | || ||||| |||||||||||||| ||||| | | || |||||| | || Sbjct 85469 CGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGCT 85410 Query 176893 GCATTCCCAGTTGTTTGCATCTGGTTTACTGCAATGGGTGTTTGCACAATGGCATTCAAC 176952 || | ||||||||| | || ||||| ||||| | ||| ||| || |||||||||||| Sbjct 85409 GCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAAC 85350 Query 176953 CTTAACGGTTTCAACTTCAACCAGTCTGTCTTAG----ACAACTCTGGTAAAGTGATTCC 177008 | || ||||||||||||||||| || || ||| |||| ||| || || Sbjct 85349 TTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAA----GGTCGTGTAATCAA 85294 Query 177009 TACATGGGGAGATATCCTTAACCGTGCAAACCTTGGTATGGAAGTTATGCACGAGCGTAA 177068 || |||| ||| || | |||||||| ||||||||||||||||| ||||| |||||||| Sbjct 85293 CACTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAA 85234 Query 177069 TGCTCACAACTTCCCACTTGACCTTGCTGCTG 177100 ||||||||||||||| | || | |||| || Sbjct 85233 CGCTCACAACTTCCCATTAGATTTAGCTGTTG 85202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603492129352320