Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_031235.1 Length=194437 Score E Sequences producing significant alignments: (Bits) Value seq52 742 0.0 >seq52 Length=149364 Score = 742 bits (822), Expect = 0.0 Identities = 762/993 (77%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 183196 TTCTGCGAATGGATTACCAGCACTAACAACCGCCTCTATGTGGGTTGGTTTGGCACACTG 183255 || || || ||| | || |||||| | ||||| | || | ||||||||||| | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 183256 ATGATTCCAACTCTGTTGGCAGCAACCATCTGC-TTCATCGTTGCCTTCGTCGCTGCTCC 183314 ||||| || ||| | || |||| || || | || ||| | || || |||| ||||| Sbjct 86129 ATGATCCCTACTTTATTAACAGCTACT-TCAGTATTTATCATCGCATTTATCGCAGCTCC 86071 Query 183315 TCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGGTCGCTCATGTATGGAAACAA 183374 ||||| || ||||| || ||||| || || ||| | || || | | ||||||||||| Sbjct 86070 GCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAACAA 86011 Query 183375 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGACTTCACTTCTATCCCAT 183434 |||||| ||||||| || |||| |||| ||||| || || | |||||||| || || Sbjct 86010 TATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCAAT 85951 Query 183435 CTGGGAAGCAGCATCACTCGATGAGTGGCTGTATAACGGTGGTCCTTACCAACTCGTAGT 183494 ||||||||||| || || ||||||||| | || || ||||||||||||||||| | || Sbjct 85950 TTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATCGT 85891 Query 183495 CTTCCACTTCCTCATTGGCGTCTTCTGCTACATGGGTCGTGAGTGGGAATTGTCTTACCG 183554 | ||| ||| || | ||||| | | ||||||||||||||||||||||| |||| || Sbjct 85890 TTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTTCG 85831 Query 183555 TCTCGGTATGCGTCCTTGGATCTGTGTTGCTTATAGCGCACCTGTTGCTGCTGCAACCGC 183614 | | |||||||||||||||||| |||||||| ||||| |||||||| || || || Sbjct 85830 TTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACAGC 85771 Query 183615 TGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTTAGTGATGGTATGCCCCTGGGTAT 183674 ||| ||| | | ||||| |||||||||||||||| |||||||||||| | ||||| Sbjct 85770 TGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGTAT 85711 Query 183675 CAGTGGCACCTTTAACTATATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 183734 | ||| || || |||| ||| | || |||||||| |||||||||||||| |||||||| Sbjct 85710 CTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCACCC 85651 Query 183735 CTTCCACATGCTGGGTGTCGCTGGTGTCTTCGGTGGTTCTCTGTTCAGTGCAATGCACGG 183794 ||||| ||||| ||||| |||||||| || |||||||| | ||| ||| |||||||| Sbjct 85650 ATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCACGG 85591 Query 183795 TTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACTGAGTCTGAGTCACAGAACTATGG 183854 ||| || || ||||| || | |||||||||| ||||| || ||| ||| | || Sbjct 85590 TTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAAGG 85531 Query 183855 TTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATTGTCGCTGCTCATGGATACTTTGG 183914 |||||| ||||||||||||||||| || |||||||| || || |||||||| ||||| || Sbjct 85530 TTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTCGG 85471 Query 183915 TCGTCTGATCTTCCAGTATGCTTCGTTTAACAATTCTCGTTCTCTTCACTTCTTCCTTGC 183974 |||| | || ||||| |||||||| || ||||| |||||||| | || |||||| | || Sbjct 85470 TCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTAGC 85411 Query 183975 TGCTTGGCCAGTGGTCGGCATCTGGTTTACTGCTCTTGGTGTTAGCACTATGGCATTTAA 184034 |||||||||||| || || || ||||| |||||| | ||| || ||||||||||| || Sbjct 85410 TGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTCAA 85351 Query 184035 CCTGAATGGTTTTAACTTCAACCAGTCCATCATTGATGGTCAAGGTCGTGTCCTGAACAC 184094 | | |||||||| ||||||||||| || | | ||| ||||||||||| | ||||| Sbjct 85350 CTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAACAC 85291 Query 184095 CTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGC 184154 ||||||||| || |||||||||| ||||| |||||||| ||||| |||||||| || Sbjct 85290 TTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 85231 Query 184155 TCACAACTTCCCTCTCGACCTTGCTGCTGCTGA 184187 |||||||||||| | || | |||| || ||| Sbjct 85230 TCACAACTTCCCATTAGATTTAGCTGTTGTTGA 85198 Score = 426 bits (472), Expect = 2e-114 Identities = 518/706 (73%), Gaps = 0/706 (0%) Strand=Plus/Minus Query 185953 GAGGATGGTTCGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCT 186012 |||| ||||| ||||| | |||||||||||| || ||||| || |||||| | || | Sbjct 18100 GAGGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGAT 18041 Query 186013 GGTCTGGATTACTTCTTTTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCA 186072 |||| || ||| | | || || || || || ||||| ||||||| ||| |||| || | Sbjct 18040 GGTCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAA 17981 Query 186073 CAACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTA 186132 | || ||||| ||| |||||||| || || || || ||||| || | || || || Sbjct 17980 CTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTA 17921 Query 186133 ATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTAC 186192 |||| | || ||||| || |||||||| || | ||||||||||||| | | | | Sbjct 17920 ATTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCC 17861 Query 186193 TTTGGGGTCCTGAGTCTCAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGA 186252 ||||||| || || ||||||| ||| ||| || |||| |||||||| || || |||| Sbjct 17860 TTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGA 17801 Query 186253 ATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAA 186312 ||||| || || ||||| || |||||||| || ||||| ||||| || |||||||||| Sbjct 17800 CGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAA 17741 Query 186313 TCAGTCGTCTCGTAGGTATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTG 186372 | ||| ||| || || || ||||| || ||||| ||||| | || || ||| Sbjct 17740 TTGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTG 17681 Query 186373 TCTTTGTTAGTGTATTCCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCT 186432 | || ||| ||||||| | || |||||| | ||||| || |||||||| || || Sbjct 17680 TATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAA 17621 Query 186433 CCTTTGGAGTCGCAGCAATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGA 186492 |||||| || || ||||| || ||||| | || ||| ||||||| ||||| ||||||| Sbjct 17620 GCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGA 17561 Query 186493 CGTTGAATCCATTCCACATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAG 186552 | || || || ||||| |||||||||||||| ||| | ||||| | |||||| || | | Sbjct 17560 CTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTG 17501 Query 186553 CAATCCATGGTGTTACTGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACAT 186612 |||| ||||| | |||||||||||||| |||| ||| ||||| || |||||||||| Sbjct 17500 CAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACAT 17441 Query 186613 TCAAAGCATTCGATACGACGCAAGAAGAAGAAACCTATTCGATGGT 186658 || || || | | || |||| |||||||| || || ||||| Sbjct 17440 TCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 17395 Score = 426 bits (472), Expect = 2e-114 Identities = 518/706 (73%), Gaps = 0/706 (0%) Strand=Plus/Minus Query 185953 GAGGATGGTTCGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCT 186012 |||| ||||| ||||| | |||||||||||| || ||||| || |||||| | || | Sbjct 147545 GAGGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGAT 147486 Query 186013 GGTCTGGATTACTTCTTTTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGCA 186072 |||| || ||| | | || || || || || ||||| ||||||| ||| |||| || | Sbjct 147485 GGTCAGGGTTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAA 147426 Query 186073 CAACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTCTTCTTACCTTGAGGGTGCTA 186132 | || ||||| ||| |||||||| || || || || ||||| || | || || || Sbjct 147425 CTACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTA 147366 Query 186133 ATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTAC 186192 |||| | || ||||| || |||||||| || | ||||||||||||| | | | | Sbjct 147365 ATTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCC 147306 Query 186193 TTTGGGGTCCTGAGTCTCAAGGAGATATCATCCGCTGGTTCCAACTTGGGGGACTCTGGA 186252 ||||||| || || ||||||| ||| ||| || |||| |||||||| || || |||| Sbjct 147305 TTTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGA 147246 Query 186253 ATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTGCGACAGTTTGAAA 186312 ||||| || || ||||| || |||||||| || ||||| ||||| || |||||||||| Sbjct 147245 CGTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAA 147186 Query 186313 TCAGTCGTCTCGTAGGTATCCGTCCATACAATGCCATTGCTTTTTCTGGTCCTATCGCTG 186372 | ||| ||| || || || ||||| || ||||| ||||| | || || ||| Sbjct 147185 TTGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTG 147126 Query 186373 TCTTTGTTAGTGTATTCCTCATCTACCCTCTTGGACAGTCCTCATGGTTCTTCGCTCCCT 186432 | || ||| ||||||| | || |||||| | ||||| || |||||||| || || Sbjct 147125 TATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAA 147066 Query 186433 CCTTTGGAGTCGCAGCAATCTTTAGATTCCTGTTGTTCCTCCAAGGATTCCACAACTGGA 186492 |||||| || || ||||| || ||||| | || ||| ||||||| ||||| ||||||| Sbjct 147065 GCTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGA 147006 Query 186493 CGTTGAATCCATTCCACATGATGGGTGTAGCAGGTATCCTTGGTGGTGCTCTGCTGTCAG 186552 | || || || ||||| |||||||||||||| ||| | ||||| | |||||| || | | Sbjct 147005 CTTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTG 146946 Query 186553 CAATCCATGGTGTTACTGTAGAAAATACTCTTTATGAAGATGGCGAACAAGCAAACACAT 186612 |||| ||||| | |||||||||||||| |||| ||| ||||| || |||||||||| Sbjct 146945 CAATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACAT 146886 Query 186613 TCAAAGCATTCGATACGACGCAAGAAGAAGAAACCTATTCGATGGT 186658 || || || | | || |||| |||||||| || || ||||| Sbjct 146885 TCCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 146840 Score = 165 bits (182), Expect = 1e-35 Identities = 225/314 (72%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 186660 ACTGCGAACAGATTCTGGTCACAGATCTTCGGAATTGCGTTTAGCAATAAGCGTTGGCTT 186719 ||||| || | ||||||||||| || || || | || ||| ||||| |||||| | Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 186720 CATTTCTTCATGCTCTTTGTTCCTGTTATGGGTCTTTGGACCTCTTCCATTGGCATTATT 186779 || ||||| ||| | |||||||| || | |||||||||| | | ||||| | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 186780 GGTCTTGCTCTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAG 186839 ||| | ||| | ||| | ||||| ||||| || || || || | | || || || Sbjct 16228 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 16169 Query 186840 GATCCTGAGTTCGAGACGTTCTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGCC 186899 |||||||| || || || |||||||| || ||||| || || || |||||| | ||||| Sbjct 16168 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 16109 Query 186900 TGGATGGCACCAGTGGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTGCCA 186959 |||||||| | ||||| || |||||||| ||||||| ||||| || || || ||| Sbjct 16108 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 16049 Query 186960 AGAGGCAACGCTCT 186973 | || |||||||| Sbjct 16048 CGTGGAAACGCTCT 16035 Score = 165 bits (182), Expect = 1e-35 Identities = 225/314 (72%), Gaps = 0/314 (0%) Strand=Plus/Minus Query 186660 ACTGCGAACAGATTCTGGTCACAGATCTTCGGAATTGCGTTTAGCAATAAGCGTTGGCTT 186719 ||||| || | ||||||||||| || || || | || ||| ||||| |||||| | Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 186720 CATTTCTTCATGCTCTTTGTTCCTGTTATGGGTCTTTGGACCTCTTCCATTGGCATTATT 186779 || ||||| ||| | |||||||| || | |||||||||| | | ||||| | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 186780 GGTCTTGCTCTTAACCTTCGTGCTTATGACTTTGTAAGTCAGGAGGTGAGAGCAGCAGAG 186839 ||| | ||| | ||| | ||||| ||||| || || || || | | || || || Sbjct 145673 GGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGAA 145614 Query 186840 GATCCTGAGTTCGAGACGTTCTATACCAAGAATATCCTATTGAATGAAGGTCTACGTGCC 186899 |||||||| || || || |||||||| || ||||| || || || |||||| | ||||| Sbjct 145613 GATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGCT 145554 Query 186900 TGGATGGCACCAGTGGATCAACCACATGAAAACTTTGTATTTCCTGAAGAAGTGTTGCCA 186959 |||||||| | ||||| || |||||||| ||||||| ||||| || || || ||| Sbjct 145553 TGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACCA 145494 Query 186960 AGAGGCAACGCTCT 186973 | || |||||||| Sbjct 145493 CGTGGAAACGCTCT 145480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622068059460120