Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micractinium_20conductrix_20[genbank_20GCA_5F002245815.1_202017-08- 10] 301 sequences; 61,020,757 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq52 749 0.0 >seq52 Length=149364 Score = 749 bits (830), Expect = 0.0 Identities = 766/995 (77%), Gaps = 6/995 (1%) Strand=Plus/Minus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 || ||| | |||||||| |||||| |||||| | || |||||||||| || || | Sbjct 86189 TTTTGTGAGTGGGTAACTAGCACTGAAAACCGTTTATACATCGGTTGGTTTGGTGTGTTA 86130 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTT--GT-TTCATCATCGCCTTCATCGGTGCT 169468 |||||||| | | | | | || | |||| || || |||||||| || |||| ||| Sbjct 86129 ATGATCCC-TACTTTATT--AACAGCTACTTCAGTATTTATCATCGCATTTATCGCAGCT 86073 Query 169469 CCCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAAC 169528 || ||||| || ||||| || ||||| || || ||| | ||||| | | ||||| ||| Sbjct 86072 CCGCCTGTCGATATCGATGGTATCCGTGAGCCTGTTTCAGGTTCATTACTATATGGAAAC 86013 Query 169529 AACATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCC 169588 || |||||| |||||||| || | || |||| ||||| |||||| | |||||||| || Sbjct 86012 AATATCATCACTGGTGCTATTATTCCAACTTCTAACGCTATCGGTTTACACTTCTACCCA 85953 Query 169589 ATCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTT 169648 || ||||||||||| ||| ||||| ||||| ||||| |||||||||| |||||| | Sbjct 85952 ATTTGGGAAGCAGCTTCTCTTGATGAGTGGTTATACAATGGTGGTCCTTACCAACTTATC 85893 Query 169649 GTCTTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTAT 169708 || | ||| ||| || | ||| | | | | ||||||||||||||||||||||| || | | Sbjct 85892 GTTTGCCATTTCTTCTTAGGCGTTTGTTCATACATGGGTCGTGAGTGGGAATTATCTTTT 85833 Query 169709 CGTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCC 169768 ||| | |||||||| ||||||||| ||||||||||| || || ||||| ||||| | Sbjct 85832 CGTTTAGGTATGCGTCCTTGGATCGCAGTTGCTTACTCAGCACCAGTTGCTGCAGCTACA 85773 Query 169769 GCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGT 169828 ||||| ||| | | || || | || ||||| || |||||||| | ||||||| | ||| Sbjct 85772 GCTGTATTCATCATTTATCCAATCGGTCAAGGTTCTTTCTCTGATGGTATGCCTTTAGGT 85713 Query 169829 ATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCAC 169888 ||||| || || || |||| |||| | || ||||||||||||||||||||||| |||||| Sbjct 85712 ATCTCTGGTACTTTCAACTTCATGATCGTATTCCAAGCTGAGCACAACATCCTTATGCAC 85653 Query 169889 CCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCAC 169948 || ||||| |||||||||||||| || || |||||||| || | || || |||||| Sbjct 85652 CCATTCCATATGCTTGGTGTTGCTGGTGTATTTGGTGGTTCATTATTCTCTGCTATGCAC 85593 Query 169949 GGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTAT 170008 ||| || || ||||| | | | |||||||| || || ||||| || ||| | Sbjct 85592 GGTTCACTTGTAACTTCTTCTTTAATTCGTGAAACAACTGAAAACGAATCAGCTAACGAA 85533 Query 170009 GGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTC 170068 |||||||| ||||||||||||||||| || |||||||||||||| ||||| || |||||| Sbjct 85532 GGTTACAAATTCGGTCAAGAAGAAGAAACTTACAACATCGTTGCAGCTCATGGCTACTTC 85473 Query 170069 GGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTC 170128 ||||| | || |||||||| ||||| ||||||||||| |||||| | || |||||| | Sbjct 85472 GGTCGTTTAATTTTCCAATATGCTTCTTTCAACAACTCTCGTTCATTACATTTCTTCTTA 85413 Query 170129 GCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTC 170188 || || ||||| |||||||| || |||||||| ||| | ||| | || || ||||| ||| Sbjct 85412 GCTGCTTGGCCAGTTGTTGGTATTTGGTTCACTGCTTTAGGTATTTCAACTATGGCATTC 85353 Query 170189 AACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAAC 170248 ||| | || ||||||||||||||||| || | | ||| || |||||||| ||||| Sbjct 85352 AACTTAAATGGTTTCAACTTCAACCAATCAGTTGTAGATTCACAAGGTCGTGTAATCAAC 85293 Query 170249 ACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAAT 170308 || ||||||||| || |||||||||| ||||| |||||||| ||||| |||||||| Sbjct 85292 ACTTGGGCAGACATTATCAACCGTGCCAACCTTGGTATGGAAGTAATGCATGAGCGTAAC 85233 Query 170309 GCTCACAACTTCCCTCTCGACCTCGCTGCTGCTGA 170343 |||||||||||||| | || | |||| || ||| Sbjct 85232 GCTCACAACTTCCCATTAGATTTAGCTGTTGTTGA 85198 Score = 394 bits (436), Expect = 1e-104 Identities = 512/705 (73%), Gaps = 2/705 (0%) Strand=Plus/Minus Query 170589 GGGTGGTTCGATGTCCTGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGG 170648 || ||||| ||||| | |||||||||||| ||||| || || || ||| | || ||| Sbjct 18098 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 18039 Query 170649 TCTGGACTTCTTCTTTTTCCC-ACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCAC 170707 || || || || || || || || || || || ||| |||| || ||| |||| || || Sbjct 18038 TCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAAC 17980 Query 170708 GACATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAA 170767 |||||||| || |||||| || || || | ||| ||| || | ||||| ||| Sbjct 17979 TACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA 17920 Query 170768 TTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 170827 |||| | ||||| ||||| ||||| || || || ||||||||||||| | | | || Sbjct 17919 TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCT 17860 Query 170828 TTGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAA 170887 |||||| || || |||| || |||||| ||| |||| |||||||| || || |||| Sbjct 17859 TTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGAC 17800 Query 170888 TTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAAT 170947 ||||| || || ||||| || |||||||| || ||||| |||||||| ||||||||||| Sbjct 17799 GTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAAT 17740 Query 170948 CAGTCGTCTCGTAGGGATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGT 171007 ||| ||| |||| | || ||||| ||||| || || || | || || |||| Sbjct 17739 TGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTGT 17680 Query 171008 GTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTC 171067 || || || ||| | || || ||| | || || || |||||||||| ||||| Sbjct 17679 ATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAAG 17620 Query 171068 CTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGAC 171127 |||||| ||||| ||||| ||||| ||| | | ||| | ||||||||||| |||||||| Sbjct 17619 CTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGAC 17560 Query 171128 ACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGC 171187 | || || || |||||||||||||| || ||| | || || | ||| | |||| ||| Sbjct 17559 TTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTGC 17500 Query 171188 AATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTT 171247 ||||||||| | || ||||| ||||| | | ||| ||||||||| |||||||| || Sbjct 17499 AATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACATT 17440 Query 171248 TAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGT 171292 || ||| || | ||||| | ||||| ||||| || ||||| Sbjct 17439 CCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 17395 Score = 394 bits (436), Expect = 1e-104 Identities = 512/705 (73%), Gaps = 2/705 (0%) Strand=Plus/Minus Query 170589 GGGTGGTTCGATGTCCTGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGGCTGG 170648 || ||||| ||||| | |||||||||||| ||||| || || || ||| | || ||| Sbjct 147543 GGTTGGTTTGATGTAGTAGATGACTGGCTTCGTCGTGACCGTTTCGTCTTTCTAGGATGG 147484 Query 170649 TCTGGACTTCTTCTTTTTCCC-ACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGGCAC 170707 || || || || || || || || || || || ||| |||| || ||| |||| || || Sbjct 147483 TCAGGG-TTATTATTATTGCCTACAGCATACCTGGCACTTGGTGGTTGGTTTACAGGAAC 147425 Query 170708 GACATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGCTAA 170767 |||||||| || |||||| || || || | ||| ||| || | ||||| ||| Sbjct 147424 TACATTTGTAACGTCTTGGTATACTCATGGTTTAGCATCTTCATATTTAGAAGGATGTAA 147365 Query 170768 TTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 170827 |||| | ||||| ||||| ||||| || || || ||||||||||||| | | | || Sbjct 147364 TTTCTTAACAGCAGCTGTTTCAACTCCAGCGAATAGTATGGGTCATTCTTTATTATTCCT 147305 Query 170828 TTGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCTGGAA 170887 |||||| || || |||| || |||||| ||| |||| |||||||| || || |||| Sbjct 147304 TTGGGGCCCAGAAGCTCAAGGCGATTTCACACGTTGGTGTCAACTTGGTGGTCTATGGAC 147245 Query 170888 TTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTTCGGCAGTTTGAAAT 170947 ||||| || || ||||| || |||||||| || ||||| |||||||| ||||||||||| Sbjct 147244 GTTTGTTGCTCTTCACGGTGCATTTGCTCTGATTGGTTTTATGCTTCGTCAGTTTGAAAT 147185 Query 170948 CAGTCGTCTCGTAGGGATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTATCGCTGT 171007 ||| ||| |||| | || ||||| ||||| || || || | || || |||| Sbjct 147184 TGCACGTTCAGTAAAGATTCGCCCTTACAACGCAATTGCATTTTCAGCACCAATTTCTGT 147125 Query 171008 GTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGCACCTTC 171067 || || || ||| | || || ||| | || || || |||||||||| ||||| Sbjct 147124 ATTCGTTTCTGTATTCTTAATTTACCCTTTAGGACAATCTGGTTGGTTCTTTGCACCAAG 147065 Query 171068 CTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAACTGGAC 171127 |||||| ||||| ||||| ||||| ||| | | ||| | ||||||||||| |||||||| Sbjct 147064 CTTTGGTGTTGCTGCAATTTTCCGATTCATTTTATTCTTCCAAGGTTTCCATAACTGGAC 147005 Query 171128 ACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGC 171187 | || || || |||||||||||||| || ||| | || || | ||| | |||| ||| Sbjct 147004 TTTAAACCCTTTCCATATGATGGGTGTAGCGGGTGTACTTGGAGCTGCTCTACTTTGTGC 146945 Query 171188 AATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTT 171247 ||||||||| | || ||||| ||||| | | ||| ||||||||| |||||||| || Sbjct 146944 AATTCATGGCGCAACTGTAGAAAATACGCTTTTTGAGGATGGTGATGGTGCAAACACATT 146885 Query 171248 TAAGGCATTTGACACGACTCAGGAGGAAGAGACATATTCTATGGT 171292 || ||| || | ||||| | ||||| ||||| || ||||| Sbjct 146884 CCGTGCTTTTAACCCAACTCAAGCTGAAGAAACATACTCAATGGT 146840 Score = 196 bits (216), Expect = 6e-45 Identities = 237/320 (74%), Gaps = 2/320 (1%) Strand=Plus/Minus Query 171294 ACTGCTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTG 171353 ||||| |||||||||||||| || ||||||||| | || || ||||| |||||||| Sbjct 16348 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 16289 Query 171354 CATTTCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGGATTATT 171413 || ||||||||| | |||||||| || | ||||||||| | ||| | || | | Sbjct 16288 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 16229 Query 171414 GGTCTTGCTCTTAATCTTAGG-GCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGA 171472 ||| | ||| |||| |||| | || ||||||||||| || || | | || || || Sbjct 16228 GGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGA 16170 Query 171473 AGATCCAGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGC 171532 |||||| || || || || |||||||| || || || || || || |||||| ||||||| Sbjct 16169 AGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGC 16110 Query 171533 ATGGATGGCACCAGTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACC 171592 |||||||| | ||| || || |||||||| |||| ||||| ||||| ||| |||| Sbjct 16109 TTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACC 16050 Query 171593 TCGTGGCAATGCACTTTGAT 171612 ||||| || || |||| || Sbjct 16049 ACGTGGAAACGCTCTTTAAT 16030 Score = 196 bits (216), Expect = 6e-45 Identities = 237/320 (74%), Gaps = 2/320 (1%) Strand=Plus/Minus Query 171294 ACTGCTAATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTG 171353 ||||| |||||||||||||| || ||||||||| | || || ||||| |||||||| Sbjct 145793 ACTGCAAATCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCAAATAAACGTTGGTTA 145734 Query 171354 CATTTCTTTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGGATTATT 171413 || ||||||||| | |||||||| || | ||||||||| | ||| | || | | Sbjct 145733 CACTTCTTTATGTTATTTGTTCCGGTAACTGGTCTTTGGATGAGTGCAATTGGTGTAGTA 145674 Query 171414 GGTCTTGCTCTTAATCTTAGG-GCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGA 171472 ||| | ||| |||| |||| | || ||||||||||| || || | | || || || Sbjct 145673 GGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGAAATTCGCGCTGCGGA 145615 Query 171473 AGATCCAGAGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGC 171532 |||||| || || || || |||||||| || || || || || || |||||| ||||||| Sbjct 145614 AGATCCTGAATTTGAAACTTTCTATACAAAAAATATTCTTTTAAACGAAGGTATTCGTGC 145555 Query 171533 ATGGATGGCACCAGTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACC 171592 |||||||| | ||| || || |||||||| |||| ||||| ||||| ||| |||| Sbjct 145554 TTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTTGTATTCCCTGAGGAGGTTTTACC 145495 Query 171593 TCGTGGCAATGCACTTTGAT 171612 ||||| || || |||| || Sbjct 145494 ACGTGGAAACGCTCTTTAAT 145475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592196171853520