Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq5 122 2e-22 >seq5 Length=1518631 Score = 122 bits (134), Expect = 2e-22 Identities = 656/1027 (64%), Gaps = 50/1027 (5%) Strand=Plus/Minus Query 281762 CGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCTCCGGCAACAACCAGTT 281821 ||||||||| ||||| |||||||| | | || ||||| || |||| || | ||| Sbjct 240087 CGCGTGGTCCTTACCGCCCTGCAGGCGGGTACCGAACTGGCCGGAGGGCACCAGCAGGTT 240028 Query 281822 AATGTTATTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGAAGCGA--- 281878 | ||| ||||||||||| |||| || || ||| |||||| || || |||| Sbjct 240027 CACGTTGTTGCTCCCGACAAAATCTTGCGCGAGGCCGACGATGGT----GGACGCGAGGC 239972 Query 281879 -TACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTGCTACCT 281937 |||| |||||||| || ||| ||| || | || || || || ||| || || | Sbjct 239971 TGGCCTCGCCGTGGTGGTACGCGGAGTGCTCAGAGACGTAGCCCGAGAGCTGCGCAACTT 239912 Query 281938 TCACGTCTGATGTCAAGTTGCGTTTGAAAGCGC-AATATAATACTTTTCGTTGAGAAGGC 281996 | | ||| || | | || || ||| |||| | | | | || || | || || ||| Sbjct 239911 TGATGTCGGACTTGAGCTTACGCTTG-AAGCACGAGAAGAGCACCTTCCTCTGCGAGGGC 239853 Query 281997 TTGAAACCATCAACGACAGACGGAATGCTGCGTTC-CAGGTCATAC---CGCGAGAACAA 282052 ||||| || || ||||| || || || || || || | || | || ||||| | Sbjct 239852 TTGAACCCGTCGACGACGGAAGGGAT----CGATCGCATGAGATCCGCGCGGGAGAAGAG 239797 Query 282053 AATAAGTTCCTTGTCAATGAAGTCG-GGAACGGGA--ACCTCGGGCTTCTTGTGGTCAAG 282109 || || ||||||| ||||| ||| | || || | ||| | || | ||| || Sbjct 239796 GATGAGCTCCTTGTTGATGAAATCGTCGTACCTGACGTCATCGCCCGTCAT---GTCCAG 239740 Query 282110 TTGGTTTCCCGGCTCGTATGCCGTCATCCACTCCTTGCGATCCTCGGCCCGAGTCTTGTT 282169 | ||||||||||||| || ||| |||| |||||||||||||| | || ||||| | Sbjct 239739 GTACGTTCCCGGCTCGTAGGCGTTCAACCACGCCTTGCGATCCTCGACGCGCTTCTTGCT 239680 Query 282170 GAAAGAACGATCGATGAGCT---CTCCAGAATCAGAAGTCCACGTAAACGTCTTCATAAG 282226 ||| | |||||||| | | | || | ||||||| || |||||| | | Sbjct 239679 GAAGGCCATGTCGATGAGGTTACCGTCGCCGTCGGTGGTCCACGCGAAGGTCTTCTTGTG 239620 Query 282227 AGTCTTC-AGGTTGCTGAAGTAATGCTTGGCATCAGTGCTGGAACTCGTACCGAGACCCT 282285 || || || | ||||| | |||||| || || || |||||||||||||| Sbjct 239619 -GTGGTCGAGCGCGGCAAAGTACTCCTTGGCTTCCTTGGCGGTTGACGTACCGAGACCCT 239561 Query 282286 TGTAATACTTGATTT----------GATACTTAGAATAATCCT--TCGTGGTCTTCACCC 282333 |||| |||||||| | | || | |||| |||| |||| || Sbjct 239560 TGTAGTACTTGATGTTCCAGCCGCGGCCGGTTCCCGT-CTCCTCGGCGTGCTCTT--TCC 239504 Query 282334 AATCCTCGTAATCCGGAAGACTATA-AAATTCGCGAACGTCCTTTCCTTTCTTGGCGACC 282392 | | ||||| || ||||| | || ||| | | | | ||| || || | || Sbjct 239503 AGTTGTCGTACTCGGGAAGGGTGTAGAAAACCTTGCTC-TGCTTGCCCTTGGTCGCCTTG 239445 Query 282393 ACGATAGGTGTGATGAACTTCTTCAAGAAACCTGGAATTTCTAGGAG-ACTGGGAAAACA 282451 | ||| || |||||||||| | |||||| ||||| | || || ||||||| Sbjct 239444 ATGATCGGGGTGATGAACTCGACGAGGAAACCGGGAATCTTGAGCAGCGATGGGAAATGC 239385 Query 282452 GCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGT 282511 || |||| |||||| || | ||||| ||||| | ||||| ||| ||||| Sbjct 239384 GC-GTGGAGAAAGTTAATCAGGAGACCCTTGATGTGGGAGCCGTCGTGGTCCTGATCGGT 239326 Query 282512 CATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTTTG 282571 ||||||||| | |||||||| | || | | | |||| | ||| | Sbjct 239325 CATGATCATGATGTGACCGTAGCGGAGGCTCTTGGCGGACTCGTACGTGGTGCCGTGGCG 239266 Query 282572 AAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTTCTTTGTGATACTTGCCACAGA 282631 ||||| | || || |||| | | || || |||| || |||| || | | Sbjct 239265 GAGGCCGAGGATCTGCTTGATGTGGTTAATCTCGGCGTTGTTCATGAT-CTGATCGTGGC 239207 Query 282632 T-GCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTCGCGAC 282690 | || || |||||||| || | |||||||||||| || || || || |||| ||||||| Sbjct 239206 TCGCGTCACGAACGTTGAGAAGCTTACCGCGGAGCGGGAAGACGCCGTATCGATCGCGAC 239147 Query 282691 CGACCACGGACAGTCCTGCAATTGCAAGTGTTGCTGCGGAATCTCCCTCCGTCAAGATGA 282750 |||| ||||| || || | | ||||||| || || || || || || | ||||| Sbjct 239146 CGACGACGGAGAGGCCGGACACCGCAAGTGCCTTCGCCGAGTCACCTTCGGTAAGGATGA 239087 Query 282751 GAGTACA 282757 | || || Sbjct 239086 GGGTGCA 239080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823742485970