Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5 354 1e-92 >seq5 Length=1518631 Score = 354 bits (392), Expect = 1e-92 Identities = 465/636 (73%), Gaps = 6/636 (1%) Strand=Plus/Plus Query 145635 GATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCA 145693 |||| ||||| | || || |||| ||| ||| | || ||||| | |||||||| | Sbjct 815295 GATCTTGAGCGTCGGGAACGGCCTGGG-CTCGTTCTCGAGCTGCTTGTAGAGGGGCTCGA 815353 Query 145694 CGTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTGGATGAAGTCCCCGGGCTCGAGG 145752 |||||||| ||| ||||| | ||| || ||| | ||| | ||||| ||||||| || Sbjct 815354 CGTGGTTGGAGTACACGTGGGTGTCGCCGCAGCA-GTGCACAAAGTCTCCGGGCTTCAGT 815412 Query 145753 CCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812 || | || || |||||| |||| |||||||||||||| || |||||||||||||| Sbjct 815413 CCGCACACCTGCGCCACCATGCAGGTGAGCAGGGAGTAGCTCGCGATGTTGAAGGGCACA 815472 Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872 || || |||||||| | ||| | |||||||| |||||| || | ||| ||| || ||| Sbjct 815473 CCGAGGCCCATGTCGCACGACCTCTGGTACATCTGGCACGATAACTCACCGTTTGCGACG 815532 Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932 || |||||||| | | |||||| || ||||||||||| | || |||| |||||| Sbjct 815533 TAAAACTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTCCTTGAGCGCCGCGGGGTTC 815592 Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCC 145992 || |||||||| | || | |||| | |||||| ||||||||| | |||| ||| Sbjct 815593 CACGCGGTGAGCAGGATACGCCTGTCGTTGGGGTTGTTCTTGATCTTGTCGATCACCTCC 815652 Query 145993 CTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCC 146051 |||||||||||| ||||| || || || | | || | |||| |||| |||| || Sbjct 815653 GCGAGCTGGTCCACTCCCTGACCGGTATAGTC-GGCGTGCATGTCCTTGTACTCGGCGCC 815711 Query 146052 GAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAG 146111 |||||| | ||||||||| ||||| || ||||| ||||| || ||||||||| ||||| Sbjct 815712 GAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCACCCTCCTCCCTGTGACCCAG 815771 Query 146112 CCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGC 146171 ||| | | | ||||| | || ||| ||||| ||||||| || | | | || | | Sbjct 815772 GCCGACGCTGTCGAGGTACTCGCGGCTTCCGTTACCGTCCCAAATGTGAATGTCCTTGTC 815831 Query 146172 GGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCC 146231 ||| || |||| | ||| | ||| ||| |||||||| ||||| || ||| || Sbjct 815832 CTGGAGTTCCTTGGCGCTGGTGCAGCCCTTGACGAACCAGATGAGCTCCTCCGCGACGCC 815891 Query 146232 CCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 |||||||||||| | ||||||||| ||||| ||||| Sbjct 815892 CCTCCAGAAGACACGCTTGGTGGTGAGCAGCGGGAA 815927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076659856760