Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq5 354 1e-92
>seq5
Length=1518631
Score = 354 bits (392), Expect = 1e-92
Identities = 465/636 (73%), Gaps = 6/636 (1%)
Strand=Plus/Plus
Query 145635 GATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCA 145693
|||| ||||| | || || |||| ||| ||| | || ||||| | |||||||| |
Sbjct 815295 GATCTTGAGCGTCGGGAACGGCCTGGG-CTCGTTCTCGAGCTGCTTGTAGAGGGGCTCGA 815353
Query 145694 CGTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTGGATGAAGTCCCCGGGCTCGAGG 145752
|||||||| ||| ||||| | ||| || ||| | ||| | ||||| ||||||| ||
Sbjct 815354 CGTGGTTGGAGTACACGTGGGTGTCGCCGCAGCA-GTGCACAAAGTCTCCGGGCTTCAGT 815412
Query 145753 CCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812
|| | || || |||||| |||| |||||||||||||| || ||||||||||||||
Sbjct 815413 CCGCACACCTGCGCCACCATGCAGGTGAGCAGGGAGTAGCTCGCGATGTTGAAGGGCACA 815472
Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872
|| || |||||||| | ||| | |||||||| |||||| || | ||| ||| || |||
Sbjct 815473 CCGAGGCCCATGTCGCACGACCTCTGGTACATCTGGCACGATAACTCACCGTTTGCGACG 815532
Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932
|| |||||||| | | |||||| || ||||||||||| | || |||| ||||||
Sbjct 815533 TAAAACTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTCCTTGAGCGCCGCGGGGTTC 815592
Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCC 145992
|| |||||||| | || | |||| | |||||| ||||||||| | |||| |||
Sbjct 815593 CACGCGGTGAGCAGGATACGCCTGTCGTTGGGGTTGTTCTTGATCTTGTCGATCACCTCC 815652
Query 145993 CTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCC 146051
|||||||||||| ||||| || || || | | || | |||| |||| |||| ||
Sbjct 815653 GCGAGCTGGTCCACTCCCTGACCGGTATAGTC-GGCGTGCATGTCCTTGTACTCGGCGCC 815711
Query 146052 GAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAG 146111
|||||| | ||||||||| ||||| || ||||| ||||| || ||||||||| |||||
Sbjct 815712 GAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCACCCTCCTCCCTGTGACCCAG 815771
Query 146112 CCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGC 146171
||| | | | ||||| | || ||| ||||| ||||||| || | | | || | |
Sbjct 815772 GCCGACGCTGTCGAGGTACTCGCGGCTTCCGTTACCGTCCCAAATGTGAATGTCCTTGTC 815831
Query 146172 GGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCC 146231
||| || |||| | ||| | ||| ||| |||||||| ||||| || ||| ||
Sbjct 815832 CTGGAGTTCCTTGGCGCTGGTGCAGCCCTTGACGAACCAGATGAGCTCCTCCGCGACGCC 815891
Query 146232 CCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267
|||||||||||| | ||||||||| ||||| |||||
Sbjct 815892 CCTCCAGAAGACACGCTTGGTGGTGAGCAGCGGGAA 815927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590076659856760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |