Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 8e-13 >seq1 Length=2053059 Score = 89.7 bits (98), Expect = 8e-13 Identities = 190/286 (66%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 202792 CATATATCTAATTTTACCAAATATTGGTCTTTCTTTCCATGCTCTATCATGAA-TACCAC 202850 |||||| | || || ||||||||||| | ||| ||| || ||||| | | |||| Sbjct 927864 CATATAACGTATCTTTCCAAATATTGGGCGCTCTGACCAGCCTTGGTCATGGACTCCCAC 927805 Query 202851 AAATTGACCACATACATCCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTAT 202910 | | |||||||| || || |||||||| || ||||| ||||| | |||||| | Sbjct 927804 GA-TCGACCACATGCAACCCACATATCCTGAAGGGTCACGACCATCCAGCTGATATTTGT 927746 Query 202911 CATTTAAATNNNNNNNNNNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAttt 202970 | || | || | |||| ||||| |||| ||||||||| | || | Sbjct 927745 CGTTGAGATGAATGGCGAACTCGAGAGCTTGATCTGGAGATTCTGTCCATTCCATGATCT 927686 Query 202971 ttttAGCCCAATACATTCTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTT 203030 | || ||||||||||| | | | | || ||||| || || | | ||||| | Sbjct 927685 TCTTTGCCCAATACATGCGCATAAAACCGTGCATCTTGCCGCCGTGCACCATTTCCAACT 927626 Query 203031 GTGATGCATTCCATAAATTGTCATGAGTTAATGCATTTTCAAGTTG 203076 ||| ||| ||||||| || |||||||| | ||||||||| ||| Sbjct 927625 GTGCTGCGTTCCATAGATCATCATGAGTCTCTCCATTTTCAAATTG 927580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455820579200