Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1 89.7 8e-13
>seq1
Length=2053059
Score = 89.7 bits (98), Expect = 8e-13
Identities = 190/286 (66%), Gaps = 2/286 (1%)
Strand=Plus/Minus
Query 202792 CATATATCTAATTTTACCAAATATTGGTCTTTCTTTCCATGCTCTATCATGAA-TACCAC 202850
|||||| | || || ||||||||||| | ||| ||| || ||||| | | ||||
Sbjct 927864 CATATAACGTATCTTTCCAAATATTGGGCGCTCTGACCAGCCTTGGTCATGGACTCCCAC 927805
Query 202851 AAATTGACCACATACATCCAACATATCCATTTGGATCACGTCCATCTATAAAATATTTAT 202910
| | |||||||| || || |||||||| || ||||| ||||| | |||||| |
Sbjct 927804 GA-TCGACCACATGCAACCCACATATCCTGAAGGGTCACGACCATCCAGCTGATATTTGT 927746
Query 202911 CATTTAAATNNNNNNNNNNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAttt 202970
| || | || | |||| ||||| |||| ||||||||| | || |
Sbjct 927745 CGTTGAGATGAATGGCGAACTCGAGAGCTTGATCTGGAGATTCTGTCCATTCCATGATCT 927686
Query 202971 ttttAGCCCAATACATTCTTAAATATCCATGCATTTTACCATAGATAATCATTTGTTTTT 203030
| || ||||||||||| | | | | || ||||| || || | | ||||| |
Sbjct 927685 TCTTTGCCCAATACATGCGCATAAAACCGTGCATCTTGCCGCCGTGCACCATTTCCAACT 927626
Query 203031 GTGATGCATTCCATAAATTGTCATGAGTTAATGCATTTTCAAGTTG 203076
||| ||| ||||||| || |||||||| | ||||||||| |||
Sbjct 927625 GTGCTGCGTTCCATAGATCATCATGAGTCTCTCCATTTTCAAATTG 927580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455820579200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |