Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1 111 3e-19 >seq1 Length=2053059 Score = 111 bits (122), Expect = 3e-19 Identities = 200/287 (70%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 189419 CAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTG 189478 ||| | ||||| | || ||||||||| |||||||||||| |||| || | |||||| Sbjct 927580 CAATTTGAAAATGGAGAGACTCATGATGATCTATGGAACGCAGCACAGTTGGAAATGGTG 927639 Query 189479 AGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGG 189538 | || || ||||| ||||| | || ||||||||||| |||||||| | |||||| Sbjct 927640 CACGGCGGCAAGATGCACGGTTTTATGCGCATGTATTGGGCAAAGAAGATCATGGAATGG 927699 Query 189539 ACTAGAA-CACCTGAAGACGCT-TTGAGTTATAGTATCTATTTGAACAACAAGTACGAAC 189596 || |||| | || || | ||| | ||||| || || | ||| |||| || | | Sbjct 927700 AC-AGAATCTCCAGATCAAGCTCTCGAGTT-CGCCATTCATCTCAACGACAAATATCAGC 927757 Query 189597 TAGACGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACG 189656 | || || || ||| ||||| || ||||| |||||||| || ||| | || | Sbjct 927758 TGGATGGTCGTGACCCTTCAGGATATGTGGGTTGCATGTGGTCGATCGTGGGAGTCCATG 927817 Query 189657 ATAGAGCGTGGAAAGAAAGACCGATATTTGGAAAGATAAGATATATG 189703 | || ||| ||| | || ||||||||||||||| | |||||| Sbjct 927818 ACCAAGGCTGGTCAGAGCGCCCAATATTTGGAAAGATACGTTATATG 927864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923196580740760