Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq1 111 3e-19
>seq1
Length=2053059
Score = 111 bits (122), Expect = 3e-19
Identities = 200/287 (70%), Gaps = 4/287 (1%)
Strand=Plus/Plus
Query 189419 CAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTG 189478
||| | ||||| | || ||||||||| |||||||||||| |||| || | ||||||
Sbjct 927580 CAATTTGAAAATGGAGAGACTCATGATGATCTATGGAACGCAGCACAGTTGGAAATGGTG 927639
Query 189479 AGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGG 189538
| || || ||||| ||||| | || ||||||||||| |||||||| | ||||||
Sbjct 927640 CACGGCGGCAAGATGCACGGTTTTATGCGCATGTATTGGGCAAAGAAGATCATGGAATGG 927699
Query 189539 ACTAGAA-CACCTGAAGACGCT-TTGAGTTATAGTATCTATTTGAACAACAAGTACGAAC 189596
|| |||| | || || | ||| | ||||| || || | ||| |||| || | |
Sbjct 927700 AC-AGAATCTCCAGATCAAGCTCTCGAGTT-CGCCATTCATCTCAACGACAAATATCAGC 927757
Query 189597 TAGACGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACG 189656
| || || || ||| ||||| || ||||| |||||||| || ||| | || |
Sbjct 927758 TGGATGGTCGTGACCCTTCAGGATATGTGGGTTGCATGTGGTCGATCGTGGGAGTCCATG 927817
Query 189657 ATAGAGCGTGGAAAGAAAGACCGATATTTGGAAAGATAAGATATATG 189703
| || ||| ||| | || ||||||||||||||| | ||||||
Sbjct 927818 ACCAAGGCTGGTCAGAGCGCCCAATATTTGGAAAGATACGTTATATG 927864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923196580740760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |