Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq5 253 2e-62
>seq5
Length=1518631
Score = 253 bits (280), Expect = 2e-62
Identities = 411/586 (70%), Gaps = 4/586 (1%)
Strand=Plus/Plus
Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984
||||| || ||||||||| ||| ||||||| ||| || || |||||||||||||||
Sbjct 815344 AGGGGCTCGACGTGGTTGGAGTACACGTGGGTGTCGCCGCAGCAGTGCACAAAGTCTCCG 815403
Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044
|| |||| || || || || | || | || || |||| |||||| ||||||||
Sbjct 815404 GGCTTCAGTCCGCACACCTGCGCCACCATGCAGGTGAGCAGGGAGTAGCTCGCGATGTTG 815463
Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCC 21104
|| || || ||||||||||||||| ||||||||||||| |||||| || | ||| ||
Sbjct 815464 AAGGGCACACCGAGGCCCATGTCGCACGACCTCTGGTACATCTGGCACGATAACTCACCG 815523
Query 21105 CGAGCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCC 21164
|| ||||||||||| || || | ||| || || || || |||||| | ||| ||
Sbjct 815524 TTTGCGACGTAAAACTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTCCTTGAGCGCC 815583
Query 21165 GCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCC 21224
||||||||||||||| | | ||| |||| |||| ||| | || || ||
Sbjct 815584 GCGGGGTTCCACGCGGTGAGCAGGATACGCCTGTCGTTGGGGTTGTTCTTGATCTTGTCG 815643
Query 21225 ACCACGTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTA 21283
| ||| | ||| ||||||||||| |||||||| |||| ||||| || ||||
Sbjct 815644 ATCACCT-CCGCGAGCTGGTCCACTCCCTGACCGGTATAGTCGGCGTGCATGTCCTTGTA 815702
Query 21284 CTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCG 21343
||| || || || || | ||||||||| |||||||||||||| || || ||||| |
Sbjct 815703 CTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCACCCTCCTCCCT 815762
Query 21344 GTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTA 21402
|| || || || ||| | | | | ||||| |||| |||||||||| | |
Sbjct 815763 GTGACC-CAGGCCGACGCTGTCGAGGTACTCGCGGCTTCCGTTACCGTCCCAAATGTGAA 815821
Query 21403 CGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCT 21462
| | | | ||||| ||| | |||| ||||| ||| ||||| | | |||||
Sbjct 815822 TGTCCTTGTCCTGGAGTTCCTTGGCGCTGGTGCAGCCCTTGACGAACCAGATGAGCTCCT 815881
Query 21463 CCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAA 21508
|| ||||||||||||| || || | |||||||| | ||| || ||
Sbjct 815882 CCGCGACGCCCCTCCAGAAGACACGCTTGGTGGTGAGCAGCGGGAA 815927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775900943120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |