Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq5 253 2e-62 >seq5 Length=1518631 Score = 253 bits (280), Expect = 2e-62 Identities = 411/586 (70%), Gaps = 4/586 (1%) Strand=Plus/Plus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 ||||| || ||||||||| ||| ||||||| ||| || || ||||||||||||||| Sbjct 815344 AGGGGCTCGACGTGGTTGGAGTACACGTGGGTGTCGCCGCAGCAGTGCACAAAGTCTCCG 815403 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || |||| || || || || | || | || || |||| |||||| |||||||| Sbjct 815404 GGCTTCAGTCCGCACACCTGCGCCACCATGCAGGTGAGCAGGGAGTAGCTCGCGATGTTG 815463 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCC 21104 || || || ||||||||||||||| ||||||||||||| |||||| || | ||| || Sbjct 815464 AAGGGCACACCGAGGCCCATGTCGCACGACCTCTGGTACATCTGGCACGATAACTCACCG 815523 Query 21105 CGAGCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCC 21164 || ||||||||||| || || | ||| || || || || |||||| | ||| || Sbjct 815524 TTTGCGACGTAAAACTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTCCTTGAGCGCC 815583 Query 21165 GCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCC 21224 ||||||||||||||| | | ||| |||| |||| ||| | || || || Sbjct 815584 GCGGGGTTCCACGCGGTGAGCAGGATACGCCTGTCGTTGGGGTTGTTCTTGATCTTGTCG 815643 Query 21225 ACCACGTAACGC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTA 21283 | ||| | ||| ||||||||||| |||||||| |||| ||||| || |||| Sbjct 815644 ATCACCT-CCGCGAGCTGGTCCACTCCCTGACCGGTATAGTCGGCGTGCATGTCCTTGTA 815702 Query 21284 CTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCG 21343 ||| || || || || | ||||||||| |||||||||||||| || || ||||| | Sbjct 815703 CTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCACCCTCCTCCCT 815762 Query 21344 GTCCCCGAAGCCCTGCGCCG-CCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTA 21402 || || || || ||| | | | | ||||| |||| |||||||||| | | Sbjct 815763 GTGACC-CAGGCCGACGCTGTCGAGGTACTCGCGGCTTCCGTTACCGTCCCAAATGTGAA 815821 Query 21403 CGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCT 21462 | | | | ||||| ||| | |||| ||||| ||| ||||| | | ||||| Sbjct 815822 TGTCCTTGTCCTGGAGTTCCTTGGCGCTGGTGCAGCCCTTGACGAACCAGATGAGCTCCT 815881 Query 21463 CCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAA 21508 || ||||||||||||| || || | |||||||| | ||| || || Sbjct 815882 CCGCGACGCCCCTCCAGAAGACACGCTTGGTGGTGAGCAGCGGGAA 815927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775900943120