Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq7 89.7 5e-13
seq8 82.4 8e-11
>seq7
Length=1394110
Score = 89.7 bits (98), Expect = 5e-13
Identities = 121/169 (72%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 52892 TGGGCATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGA 52951
|||||||||||||| | |||| |||||||||||||||||| |||||| | ||| |||
Sbjct 900566 TGGGCATGAACGCGGATCTCATGTCCGAGTACATCGAGTTTGTCGCGGACCGCCTGATGA 900625
Query 52952 TGCAGCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACA 53011
||||||||| | ||| | || | | ||||| || || ||| | | |
Sbjct 900626 CGCAGCTCGGCGTGGAGAAGGTGTGGAACACCCCCAACCCGTTCGAGTGGATGGAGATGA 900685
Query 53012 TATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTA 53060
|||||||| ||||||| | ||||| |||||| || |||| | ||||
Sbjct 900686 TATCGCTCCAGGGCAAGGCGAACTTCTTCGAGCACCGGGTGGACCAGTA 900734
>seq8
Length=1276107
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || || ||||| || || | |||| ||| |||||||| || |||
Sbjct 456129 GTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCGTCCTCGAGCTGCTTGCCA 456188
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| ||||||| || ||||| || || || ||||| || ||||| ||| || ||
Sbjct 456189 GCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTG 456248
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | ||||||| | ||| ||||| | ||| | ||||||||||| | ||
Sbjct 456249 ACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTC 456308
Query 139748 TTTACGAATATTTGCATA 139765
|| ||||| || ||||||
Sbjct 456309 TTGACGAAGATCTGCATA 456326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063882184800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |