Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 104 5e-17 >seq1 Length=2053059 Score = 104 bits (114), Expect = 5e-17 Identities = 184/261 (70%), Gaps = 8/261 (3%) Strand=Plus/Plus Query 238575 GAAACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGGT--AAGACTAGGCAAAA 238632 || ||||| ||| |||||||| | || ||| | ||||||| | | | ||||| | Sbjct 927595 GAGACTCATGATGATCTATGGAACGCAGCACAGTTGGAAATGGTGCACGGC--GGCAAGA 927652 Query 238633 TGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAATGGACTAGATCTCCAA 238692 |||| |||| | || ||||||||||| || ||||| | |||||||| ||||||| Sbjct 927653 TGCACGGTTTTATGCGCATGTATTGGGCAAAGAAGATCATGGAATGGACAGAATCTCCAG 927712 Query 238693 AGGAAGCTCTTAGATATAG-TATTTATCTGAACGATAAATACGAACTCGACGGTACGGAT 238751 | |||||| | || | | ||| |||| ||||| ||||| | || || ||| || Sbjct 927713 ATCAAGCTC-TCGAGTTCGCCATTCATCTCAACGACAAATATCAGCTGGATGGTCGTGAC 927771 Query 238752 CCTAACGGATACGTAGGTTGTATGTGGTCAATATGTGGATTACACGA-TAGGGCATGGTC 238810 ||| ||||| || ||||| |||||||| || ||| | || || | ||| ||||| Sbjct 927772 CCTTCAGGATATGTGGGTTGCATGTGGTCGATCGTGGGAGTCCATGACCAAGGC-TGGTC 927830 Query 238811 TGAGAGACCTATATTTGGAAA 238831 ||| | || ||||||||||| Sbjct 927831 AGAGCGCCCAATATTTGGAAA 927851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398119706452