Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1 104 5e-17
>seq1
Length=2053059
Score = 104 bits (114), Expect = 5e-17
Identities = 184/261 (70%), Gaps = 8/261 (3%)
Strand=Plus/Plus
Query 238575 GAAACTCACGATCCCCTATGGAATTCCGCCCAGATACAAATGGT--AAGACTAGGCAAAA 238632
|| ||||| ||| |||||||| | || ||| | ||||||| | | | ||||| |
Sbjct 927595 GAGACTCATGATGATCTATGGAACGCAGCACAGTTGGAAATGGTGCACGGC--GGCAAGA 927652
Query 238633 TGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAATGGACTAGATCTCCAA 238692
|||| |||| | || ||||||||||| || ||||| | |||||||| |||||||
Sbjct 927653 TGCACGGTTTTATGCGCATGTATTGGGCAAAGAAGATCATGGAATGGACAGAATCTCCAG 927712
Query 238693 AGGAAGCTCTTAGATATAG-TATTTATCTGAACGATAAATACGAACTCGACGGTACGGAT 238751
| |||||| | || | | ||| |||| ||||| ||||| | || || ||| ||
Sbjct 927713 ATCAAGCTC-TCGAGTTCGCCATTCATCTCAACGACAAATATCAGCTGGATGGTCGTGAC 927771
Query 238752 CCTAACGGATACGTAGGTTGTATGTGGTCAATATGTGGATTACACGA-TAGGGCATGGTC 238810
||| ||||| || ||||| |||||||| || ||| | || || | ||| |||||
Sbjct 927772 CCTTCAGGATATGTGGGTTGCATGTGGTCGATCGTGGGAGTCCATGACCAAGGC-TGGTC 927830
Query 238811 TGAGAGACCTATATTTGGAAA 238831
||| | || |||||||||||
Sbjct 927831 AGAGCGCCCAATATTTGGAAA 927851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151398119706452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |