Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq5 111 1e-19 >seq5 Length=1518631 Score = 111 bits (122), Expect = 1e-19 Identities = 178/253 (70%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 5240 CCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACCTCTTGA 5299 ||||| || |||||||| | || ||||| ||| |||||| | | ||||| | Sbjct 1420312 CCGGTGGATCCGAATCCTCCCGCACCTCGGTCCGTGGCGTCCAGGTCCTCCACCTCCAAA 1420253 Query 5300 ACTGCTGG-GTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAAC 5358 || | || ||| | ||||| ||| || |||||||| | | ||| |||||||| || Sbjct 1420252 ACCTCCGGCGTG-GTGATGCGCTCGAGGATGAGCTGAGCGACGCGGTCACCCTTCTTCAC 1420194 Query 5359 CTCAAAGTCGCTGTTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTC 5418 ||||||||| | | ||| ||| ||||| | || ||||| ||||| ||||| || | Sbjct 1420193 CTCAAAGTCCTTCTCGCCGTGGTTGAACAGGATGACGCCGACGTTGCCGCGGTAATCGTA 1420134 Query 5419 GTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGC 5478 ||||| ||||| ||||| |||||| ||||| || ||| || ||||| | || || Sbjct 1420133 GTCGACGACGCCCGCGCCGGTGTCGATGAAGTGCTTCCACGCGAGTCCGGACCTAGGGGC 1420074 Query 5479 TATGCGTCCGTAG 5491 ||||| ||||| Sbjct 1420073 GATGCGCGCGTAG 1420061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447750293659280