Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq5 147 2e-30
>seq5
Length=1518631
Score = 147 bits (162), Expect = 2e-30
Identities = 185/254 (73%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 5502 CGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTT 5561
|||| ||||| |||||||| || || |||| ||||| |||||||| | |||||||
Sbjct 1420314 CGCCGGTGGATCCGAATCCTCCCGCACCTCGGTCCGTGGCGTCCAGGTCCTCCACCTCCA 1420255
Query 5562 CCACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTA 5621
|| || || | ||||||| ||| ||||| || | ||||| ||| |||| |
Sbjct 1420254 AAACCTCCGGCGTGGTGATGCGCTCGAGGATGAGCTGAGCGACGCGGTCACCCTTCTTCA 1420195
Query 5622 CCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGG 5681
|||| || || || | |||| ||||||||| | ||||| |||||||||||||| |||
Sbjct 1420194 CCTCAAAGTCCTTCTCGCCGTGGTTGAACAGGATGACGCCGACGTTGCCGCGGTAATCGT 1420135
Query 5682 CGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAG 5741
||| | ||||||||||| ||||||||||||||| ||| || ||||| | || |
Sbjct 1420134 AGTCGACGACGCCCGCGCCGGTGTCGATGAAGTGCTTCCACGCGAGTCCGGACCTAGGGG 1420075
Query 5742 CCACGCGGCCGTAG 5755
| | ||| |||||
Sbjct 1420074 CGATGCGCGCGTAG 1420061
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430054300415528
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