Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq5 147 2e-30 >seq5 Length=1518631 Score = 147 bits (162), Expect = 2e-30 Identities = 185/254 (73%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 5502 CGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTT 5561 |||| ||||| |||||||| || || |||| ||||| |||||||| | ||||||| Sbjct 1420314 CGCCGGTGGATCCGAATCCTCCCGCACCTCGGTCCGTGGCGTCCAGGTCCTCCACCTCCA 1420255 Query 5562 CCACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTA 5621 || || || | ||||||| ||| ||||| || | ||||| ||| |||| | Sbjct 1420254 AAACCTCCGGCGTGGTGATGCGCTCGAGGATGAGCTGAGCGACGCGGTCACCCTTCTTCA 1420195 Query 5622 CCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGG 5681 |||| || || || | |||| ||||||||| | ||||| |||||||||||||| ||| Sbjct 1420194 CCTCAAAGTCCTTCTCGCCGTGGTTGAACAGGATGACGCCGACGTTGCCGCGGTAATCGT 1420135 Query 5682 CGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAG 5741 ||| | ||||||||||| ||||||||||||||| ||| || ||||| | || | Sbjct 1420134 AGTCGACGACGCCCGCGCCGGTGTCGATGAAGTGCTTCCACGCGAGTCCGGACCTAGGGG 1420075 Query 5742 CCACGCGGCCGTAG 5755 | | ||| ||||| Sbjct 1420074 CGATGCGCGCGTAG 1420061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054300415528