Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq5 185 6e-42
>seq5
Length=1518631
Score = 185 bits (204), Expect = 6e-42
Identities = 409/608 (67%), Gaps = 13/608 (2%)
Strand=Plus/Plus
Query 25373 GTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTC 25432
||| ||| | || || || || || |||||||| |||||||||| | | || || ||
Sbjct 815292 GTTGATCTTGAGCGTCGGGAACGGCCTGGGCTCGTTCTCGAGCTGCTTGTAGAGGGGCTC 815351
Query 25433 TACGTGATCCAGGTAGACGTGAGCGTCTCC-CAGAGTGTGGACAAACTCTCCCGGTTCTA 25491
||||| | ||| ||||| | ||| || ||| ||| ||||| ||||| || | |
Sbjct 815352 GACGTGGTTGGAGTACACGTGGGTGTCGCCGCAGCA-GTGCACAAAGTCTCCGGGCTTCA 815410
Query 25492 GCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTA 25551
| ||| || | |||| |||| | ||||| || ||||||| |||||||| ||||| |
Sbjct 815411 GTCCGCACACCTGCGCCACCATGCAGGTGAGCAGGGAGTAGCTCGCGATGTTGAAGGGCA 815470
Query 25552 CCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTC 25611
| |||| |||||||| | | ||||||||||| | ||| ||||| | ||| |||
Sbjct 815471 CACCGAGGCCCATGTCGCAC-GACCTCTGGTACATCTGGCACGATAACTCACCGTTTGCG 815529
Query 25612 ACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGG 25671
||||||||||| || | ||| |||||| || || || || | | |||
Sbjct 815530 ACGTAAAACTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTCCTTGAGCGCCGCGGGG 815589
Query 25672 TTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGAT----AAGATCCGC 25727
||||| ||| | | ||| | |||||| | ||||||| | |||| |||| |
Sbjct 815590 TTCCACGCGGTGAGCAGGATACGCCTGTCGTTGGGGTTGTTCTTGATCTTGTCGATCACC 815649
Query 25728 GGTGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACT 25786
| || ||||| ||||| ||| || | ||||| || ||||||| ||||||
Sbjct 815650 -----TCCGCGAGCTGGTCCACTCCCTGACCGGTATAGTCGGCGTGCATGTCCTTGTACT 815704
Query 25787 CTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGT 25846
| || ||||| | | ||||||||| ||||||||||| || ||||| || || |||||||
Sbjct 815705 CGGCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCACCCTCCTCCCTGT 815764
Query 25847 GCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCC 25906
| | | ||| | || | | || | | || || ||||||| || | |
Sbjct 815765 GACCCAGGCCGACGCTGTCGAGGTACTCGCGGCTTCCGTTACCGTCCCAAATGTGAATGT 815824
Query 25907 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCG 25966
|||| || ||| || |||| | | ||| | || |||||||||| | |||||| |||
Sbjct 815825 CCTTGTCCTGGAGTTCCTTGGCGCTGGTGCAGCCCTTGACGAACCAGATGAGCTCCTCCG 815884
Query 25967 TGACGGCC 25974
|||| ||
Sbjct 815885 CGACGCCC 815892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137521236887
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |