Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5 185 6e-42 >seq5 Length=1518631 Score = 185 bits (204), Expect = 6e-42 Identities = 409/608 (67%), Gaps = 13/608 (2%) Strand=Plus/Plus Query 25373 GTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTC 25432 ||| ||| | || || || || || |||||||| |||||||||| | | || || || Sbjct 815292 GTTGATCTTGAGCGTCGGGAACGGCCTGGGCTCGTTCTCGAGCTGCTTGTAGAGGGGCTC 815351 Query 25433 TACGTGATCCAGGTAGACGTGAGCGTCTCC-CAGAGTGTGGACAAACTCTCCCGGTTCTA 25491 ||||| | ||| ||||| | ||| || ||| ||| ||||| ||||| || | | Sbjct 815352 GACGTGGTTGGAGTACACGTGGGTGTCGCCGCAGCA-GTGCACAAAGTCTCCGGGCTTCA 815410 Query 25492 GCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTA 25551 | ||| || | |||| |||| | ||||| || ||||||| |||||||| ||||| | Sbjct 815411 GTCCGCACACCTGCGCCACCATGCAGGTGAGCAGGGAGTAGCTCGCGATGTTGAAGGGCA 815470 Query 25552 CCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTC 25611 | |||| |||||||| | | ||||||||||| | ||| ||||| | ||| ||| Sbjct 815471 CACCGAGGCCCATGTCGCAC-GACCTCTGGTACATCTGGCACGATAACTCACCGTTTGCG 815529 Query 25612 ACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGG 25671 ||||||||||| || | ||| |||||| || || || || | | ||| Sbjct 815530 ACGTAAAACTGGCAGAACATGTGGCACGGGGGCAGGGCCATCTCCTTGAGCGCCGCGGGG 815589 Query 25672 TTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGAT----AAGATCCGC 25727 ||||| ||| | | ||| | |||||| | ||||||| | |||| |||| | Sbjct 815590 TTCCACGCGGTGAGCAGGATACGCCTGTCGTTGGGGTTGTTCTTGATCTTGTCGATCACC 815649 Query 25728 GGTGTTTTGC-AGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACT 25786 | || ||||| ||||| ||| || | ||||| || ||||||| |||||| Sbjct 815650 -----TCCGCGAGCTGGTCCACTCCCTGACCGGTATAGTCGGCGTGCATGTCCTTGTACT 815704 Query 25787 CTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGT 25846 | || ||||| | | ||||||||| ||||||||||| || ||||| || || ||||||| Sbjct 815705 CGGCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGGTCACCCTCCTCCCTGT 815764 Query 25847 GCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCC 25906 | | | ||| | || | | || | | || || ||||||| || | | Sbjct 815765 GACCCAGGCCGACGCTGTCGAGGTACTCGCGGCTTCCGTTACCGTCCCAAATGTGAATGT 815824 Query 25907 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCG 25966 |||| || ||| || |||| | | ||| | || |||||||||| | |||||| ||| Sbjct 815825 CCTTGTCCTGGAGTTCCTTGGCGCTGGTGCAGCCCTTGACGAACCAGATGAGCTCCTCCG 815884 Query 25967 TGACGGCC 25974 |||| || Sbjct 815885 CGACGCCC 815892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137521236887