Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq8 89.7 4e-13
>seq8
Length=1276107
Score = 89.7 bits (98), Expect = 4e-13
Identities = 146/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
|| || ||| |||||| || |||||||| || || | | || || ||||||| |||||
Sbjct 456123 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGC-CGTCCTCGAGCTG 456181
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || || | || | |||||||| || || | | ||||||||| || ||
Sbjct 456182 CTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 456241
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||||| | | || ||||| |||| |||||| ||||| || ||||| || |||
Sbjct 456242 GGCCTTGACGTTGTCG--ATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCCG 456299
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||| || || || ||||||||
Sbjct 456300 GTGAGAGTCTTGACGAAGATCTGCAT 456325
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/206 (70%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
|| || ||| |||||| || |||||||| || || | | || || | ||||| |||||
Sbjct 455439 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGC-CATCCTCGAGCTG 455497
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || || | || | |||||||| || || | | ||||||||| || ||
Sbjct 455498 CTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 455557
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||||| | | || ||||| |||| |||||| ||||| || ||||| || |||
Sbjct 455558 GGCCTTGACGTTGTCG--ATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCCG 455615
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||| || || || ||||||||
Sbjct 455616 GTGAGAGTCTTGACGAAGATCTGCAT 455641
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/206 (70%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
|| || ||| |||||| || |||||||| || || | | || || | ||||| |||||
Sbjct 455667 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGC-CATCCTCGAGCTG 455725
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || || | || | |||||||| || || | | ||||||||| || ||
Sbjct 455726 CTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 455785
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||||| | | || ||||| |||| |||||| ||||| || ||||| || |||
Sbjct 455786 GGCCTTGACGTTGTCG--ATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCCG 455843
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||| || || || ||||||||
Sbjct 455844 GTGAGAGTCTTGACGAAGATCTGCAT 455869
Score = 84.2 bits (92), Expect = 2e-11
Identities = 145/206 (70%), Gaps = 6/206 (3%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTCCAGCTG 48582
|| || ||| |||||| || |||||||| || || | | || || | ||||| |||||
Sbjct 455895 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGC-CATCCTCGAGCTG 455953
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| || || | || | |||||||| || || | | ||||||||| || ||
Sbjct 455954 CTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTT 456013
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||||| | | || ||||| |||| |||||| ||||| || ||||| || |||
Sbjct 456014 GGCCTTGACGTTGTCG--ATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTTGCCG 456071
Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||| || || || ||||||||
Sbjct 456072 GTGAGAGTCTTGACGAAGATCTGCAT 456097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421251102454019
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |