Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq8 82.4 7e-11
>seq8
Length=1276107
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||| | ||| | || || ||||| || | ||| || || | |||| | ||||||
Sbjct 455432 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTC 455491
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || | ||||| | | ||||| || || || || || || ||||| |
Sbjct 455492 GAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTG 455551
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || ||||||||| | ||| ||||| | ||||| || | |||||||| ||
Sbjct 455552 GATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTT 455611
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || || |||||||||||
Sbjct 455612 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 455641
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||| | ||| | || || ||||| || | ||| || || | |||| | ||||||
Sbjct 455660 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTC 455719
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || | ||||| | | ||||| || || || || || || ||||| |
Sbjct 455720 GAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTG 455779
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || ||||||||| | ||| ||||| | ||||| || | |||||||| ||
Sbjct 455780 GATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTT 455839
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || || |||||||||||
Sbjct 455840 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 455869
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||| | ||| | || || ||||| || | ||| || || | |||| | ||||||
Sbjct 455888 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGAGTGCGGCCATCCTC 455947
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || | ||||| | | ||||| || || || || || || ||||| |
Sbjct 455948 GAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTG 456007
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || ||||||||| | ||| ||||| | ||||| || | |||||||| ||
Sbjct 456008 GATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTCTT 456067
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || || |||||||||||
Sbjct 456068 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 456097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448291093530840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |