Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq19 717 0.0 >seq19 Length=72585 Score = 717 bits (794), Expect = 0.0 Identities = 721/934 (77%), Gaps = 2/934 (0%) Strand=Plus/Plus Query 135395 ACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTGATGATTCCTACTCTTCTCGCA 135454 || || ||||| || || | |||||||| ||| | ||||| |||||| | || || Sbjct 10196 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 10255 Query 135455 GCTGCTATCTGCTTT-ATTGTTGCTTTCATCGCTGCACCTCCCGTCGATATTGACGGCAT 135513 || || || | || || || || || || ||||| ||||| || ||||| || || || Sbjct 10256 GCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTAT 10314 Query 135514 CCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAACATCATCTCTGGTGCTGTTAT 135573 ||| || || || |||| || || ||||||||||| |||||||||||||||||||| || Sbjct 10315 CCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAAT 10374 Query 135574 CCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCATCTGGGAAGCTGCTTCTCTTGA 135633 |||| | ||||| ||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct 10375 CCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGA 10434 Query 135634 TGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGGTCTTCCACTTCCTTATCGGTGT 135693 ||||||||| || || ||||||||||| || || | || | |||||| | ||||| | Sbjct 10435 TGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAAT 10494 Query 135694 CTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACCGACTGGGTATGCGCCCTTGGAT 135753 | || ||||||||||| |||||||| || |||| ||| | || ||||| |||||||| Sbjct 10495 TTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGAT 10554 Query 135754 TTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTCCTGGTCTACCCCTT 135813 | ||| |||||||| || ||||| || || || || ||||| ||| | || ||||| | Sbjct 10555 TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAAT 10614 Query 135814 TGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACAT 135873 || || ||||||||| |||||| ||||| ||||| |||||||||||||| |||| ||| Sbjct 10615 CGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCAT 10674 Query 135874 GCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGC 135933 | | || |||||||| || |||||||| || ||||| || ||||||||| | || ||||| Sbjct 10675 GATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGC 10734 Query 135934 TGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCT 135993 ||| || ||||||||||| || |||||||| ||||| || || || || || || ||| Sbjct 10735 TGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCT 10794 Query 135994 TGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 136053 | |||||||| |||||| || || ||| || ||||||||||| |||||||| Sbjct 10795 CATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGA 10854 Query 136054 AGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGC 136113 ||||||||||||||| || ||||| || ||||||||||| ||||| ||||||||||| || Sbjct 10855 AGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGC 10914 Query 136114 GTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTAT 136173 || ||||||||||| ||||| || ||||| ||||| || ||||| || | || || Sbjct 10915 TTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAAT 10974 Query 136174 CTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCAACCTCAATGGATTCAACTTCAA 136233 |||||| | || |||| | || || ||||| |||||||| || |||||||||||||| Sbjct 10975 CTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAA 11034 Query 136234 CCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGGGCAGATGTGCTGAATCG 136293 |||||| | ||| ||| | || |||||| | ||||| ||||| ||| | | || || Sbjct 11035 CCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCG 11094 Query 136294 TGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 |||| || |||||||| || |||||||||||| Sbjct 11095 TGCTAACCTCGGTATGGAAGTAATGCACGAGCGT 11128 Score = 717 bits (794), Expect = 0.0 Identities = 721/934 (77%), Gaps = 2/934 (0%) Strand=Plus/Minus Query 135395 ACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTGATGATTCCTACTCTTCTCGCA 135454 || || ||||| || || | |||||||| ||| | ||||| |||||| | || || Sbjct 36947 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 36888 Query 135455 GCTGCTATCTGCTTT-ATTGTTGCTTTCATCGCTGCACCTCCCGTCGATATTGACGGCAT 135513 || || || | || || || || || || ||||| ||||| || ||||| || || || Sbjct 36887 GCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTAT 36829 Query 135514 CCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAACATCATCTCTGGTGCTGTTAT 135573 ||| || || || |||| || || ||||||||||| |||||||||||||||||||| || Sbjct 36828 CCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAAT 36769 Query 135574 CCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCATCTGGGAAGCTGCTTCTCTTGA 135633 |||| | ||||| ||||| ||||||||||| || ||||||||||| ||||||||||| Sbjct 36768 CCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGA 36709 Query 135634 TGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGGTCTTCCACTTCCTTATCGGTGT 135693 ||||||||| || || ||||||||||| || || | || | |||||| | ||||| | Sbjct 36708 TGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAAT 36649 Query 135694 CTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACCGACTGGGTATGCGCCCTTGGAT 135753 | || ||||||||||| |||||||| || |||| ||| | || ||||| |||||||| Sbjct 36648 TTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGAT 36589 Query 135754 TTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTCCTGGTCTACCCCTT 135813 | ||| |||||||| || ||||| || || || || ||||| ||| | || ||||| | Sbjct 36588 TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAAT 36529 Query 135814 TGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACAT 135873 || || ||||||||| |||||| ||||| ||||| |||||||||||||| |||| ||| Sbjct 36528 CGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCAT 36469 Query 135874 GCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGC 135933 | | || |||||||| || |||||||| || ||||| || ||||||||| | || ||||| Sbjct 36468 GATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGC 36409 Query 135934 TGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCT 135993 ||| || ||||||||||| || |||||||| ||||| || || || || || || ||| Sbjct 36408 TGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCT 36349 Query 135994 TGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 136053 | |||||||| |||||| || || ||| || ||||||||||| |||||||| Sbjct 36348 CATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGA 36289 Query 136054 AGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGC 136113 ||||||||||||||| || ||||| || ||||||||||| ||||| ||||||||||| || Sbjct 36288 AGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGC 36229 Query 136114 GTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTAT 136173 || ||||||||||| ||||| || ||||| ||||| || ||||| || | || || Sbjct 36228 TTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAAT 36169 Query 136174 CTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCAACCTCAATGGATTCAACTTCAA 136233 |||||| | || |||| | || || ||||| |||||||| || |||||||||||||| Sbjct 36168 CTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAA 36109 Query 136234 CCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGGGCAGATGTGCTGAATCG 136293 |||||| | ||| ||| | || |||||| | ||||| ||||| ||| | | || || Sbjct 36108 CCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCG 36049 Query 136294 TGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 |||| || |||||||| || |||||||||||| Sbjct 36048 TGCTAACCTCGGTATGGAAGTAATGCACGAGCGT 36015 Score = 583 bits (646), Expect = 1e-161 Identities = 750/1029 (73%), Gaps = 4/1029 (0%) Strand=Plus/Plus Query 137851 AACAGAGAGGATGGTTCGATGTCTTGGATGACTGGATTAAACGAGATCGCTTTGTATTTG 137910 || || | |||||||| || | | || |||||| |||| || ||||| || ||||| | Sbjct 1981 AAAAGCGCGGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCG 2040 Query 137911 TGGGTTGGTCTGGACTACTACTTTTTCCCAC-TGCTTATTTGGCCCTTGGTGGCTGGCTT 137969 | |||||||| ||| | || || |||||| ||| || || || ||||||| ||| || Sbjct 2041 TAGGTTGGTCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTT 2099 Query 137970 ACTGGCACAACGTTTGTTACAAGCTGGTACACCCACGGGTTGGCGTCTAGTTATCTTGAA 138029 ||||| ||||| || || || |||||||| ||||| || || | || ||||| Sbjct 2100 ACTGGAACAACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAG 2159 Query 138030 GGCGCTAATTTCCTCACAGCAGCTGTTTCGACTCCTGCTGATGCTATGGGTCATTCTCTT 138089 || ||| ||||| ||| | || || || || || || | ||||| ||| || ||| Sbjct 2160 GGATGTAACTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTT 2219 Query 138090 CTTCTACTTTGGGGTCCTGAGTCTCAAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGA 138149 ||||| |||||||| || || | ||||| || || || |||| || ||||| ||| Sbjct 2220 CTTCTCCTTTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGA 2279 Query 138150 CTCTGGACTTTTGTGGCGCTCCACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAG 138209 | ||||| || || || || ||||| || || | | || ||||| ||||| || || Sbjct 2280 TTATGGACATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAA 2339 Query 138210 TTTGAGATCTCTCGTCTGGTAGGCATCCGTCCCTACAACGCAATCGCATTCTCTGGTCCC 138269 ||||| || | ||| ||| || ||||| |||||||| || |||||||| | || Sbjct 2340 TTTGAAATTGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCT 2399 Query 138270 ATCGCTGTGTTCGTCAGCGTGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTT 138329 |||||||| || || || ||||| || || || | || ||||| | ||||||||| Sbjct 2400 ATCGCTGTATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTT 2459 Query 138330 GCTCCCTCCTTTGGTGTGGCAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCAT 138389 || || || |||||||| || | ||| ||||| ||| | | ||| | || || ||||| Sbjct 2460 GCACCTTCATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCAC 2519 Query 138390 AACTGGACCCTCAACCCCTTTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTG 138449 |||||||| || ||||| || || |||||||| ||||| ||| | ||||| | || || Sbjct 2520 AACTGGACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTT 2579 Query 138450 CTCTGTGCTATTCATGGTGCTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCA 138509 || ||||| ||||| || || || ||||| || || | | |||||||| || ||| Sbjct 2580 CTTTGTGCGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCA 2639 Query 138510 AATACTTTTAAAGCATTTGAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCT 138569 || ||||| |||||| | || ||||||| ||||| || || |||||||| || || Sbjct 2640 AACACTTTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCA 2699 Query 138570 AACCGTTACTGGTCGCAAATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTC 138629 ||||||| |||||| || || || || | ||||| ||| |||||||||||||||||| Sbjct 2700 AACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTC 2759 Query 138630 TTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACTAGTAGTA-TTGGTATTATTGGTCT 138688 |||||||| || || || || | || | |||| | || | ||||| || | || | Sbjct 2760 TTTATGCTTTTCGTACCTGTAACAGGGTTATGGA-TGTCAGCACTTGGTGTTGTAGGATT 2818 Query 138689 TGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCC 138748 || |||||||| || || || || |||||||| ||||| || |||||||| |||||||| Sbjct 2819 AGCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCC 2878 Query 138749 TGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGAT 138808 ||| || || || |||||||| ||||| |||||||| || |||||| | ||||| ||||| Sbjct 2879 TGAGTTTGAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGAT 2938 Query 138809 GGCTCCTGTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGG 138868 ||| || ||||| ||||| |||||| |||| || ||||| || ||| | ||| | || Sbjct 2939 GGCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGG 2998 Query 138869 CAACGCTCT 138877 |||||||| Sbjct 2999 AAACGCTCT 3007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627967850857600