Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_006820.1
Length=196280
Score E
Sequences producing significant alignments: (Bits) Value
seq19 717 0.0
>seq19
Length=72585
Score = 717 bits (794), Expect = 0.0
Identities = 721/934 (77%), Gaps = 2/934 (0%)
Strand=Plus/Plus
Query 135395 ACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTGATGATTCCTACTCTTCTCGCA 135454
|| || ||||| || || | |||||||| ||| | ||||| |||||| | || ||
Sbjct 10196 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 10255
Query 135455 GCTGCTATCTGCTTT-ATTGTTGCTTTCATCGCTGCACCTCCCGTCGATATTGACGGCAT 135513
|| || || | || || || || || || ||||| ||||| || ||||| || || ||
Sbjct 10256 GCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTAT 10314
Query 135514 CCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAACATCATCTCTGGTGCTGTTAT 135573
||| || || || |||| || || ||||||||||| |||||||||||||||||||| ||
Sbjct 10315 CCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAAT 10374
Query 135574 CCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCATCTGGGAAGCTGCTTCTCTTGA 135633
|||| | ||||| ||||| ||||||||||| || ||||||||||| |||||||||||
Sbjct 10375 CCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGA 10434
Query 135634 TGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGGTCTTCCACTTCCTTATCGGTGT 135693
||||||||| || || ||||||||||| || || | || | |||||| | ||||| |
Sbjct 10435 TGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAAT 10494
Query 135694 CTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACCGACTGGGTATGCGCCCTTGGAT 135753
| || ||||||||||| |||||||| || |||| ||| | || ||||| ||||||||
Sbjct 10495 TTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGAT 10554
Query 135754 TTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTCCTGGTCTACCCCTT 135813
| ||| |||||||| || ||||| || || || || ||||| ||| | || ||||| |
Sbjct 10555 TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAAT 10614
Query 135814 TGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACAT 135873
|| || ||||||||| |||||| ||||| ||||| |||||||||||||| |||| |||
Sbjct 10615 CGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCAT 10674
Query 135874 GCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGC 135933
| | || |||||||| || |||||||| || ||||| || ||||||||| | || |||||
Sbjct 10675 GATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGC 10734
Query 135934 TGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCT 135993
||| || ||||||||||| || |||||||| ||||| || || || || || || |||
Sbjct 10735 TGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCT 10794
Query 135994 TGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 136053
| |||||||| |||||| || || ||| || ||||||||||| ||||||||
Sbjct 10795 CATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGA 10854
Query 136054 AGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGC 136113
||||||||||||||| || ||||| || ||||||||||| ||||| ||||||||||| ||
Sbjct 10855 AGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGC 10914
Query 136114 GTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTAT 136173
|| ||||||||||| ||||| || ||||| ||||| || ||||| || | || ||
Sbjct 10915 TTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAAT 10974
Query 136174 CTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCAACCTCAATGGATTCAACTTCAA 136233
|||||| | || |||| | || || ||||| |||||||| || ||||||||||||||
Sbjct 10975 CTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAA 11034
Query 136234 CCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGGGCAGATGTGCTGAATCG 136293
|||||| | ||| ||| | || |||||| | ||||| ||||| ||| | | || ||
Sbjct 11035 CCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCG 11094
Query 136294 TGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327
|||| || |||||||| || ||||||||||||
Sbjct 11095 TGCTAACCTCGGTATGGAAGTAATGCACGAGCGT 11128
Score = 717 bits (794), Expect = 0.0
Identities = 721/934 (77%), Gaps = 2/934 (0%)
Strand=Plus/Minus
Query 135395 ACCGACAACCGCCTCTATGTGGGTTGGTTTGGAACGCTGATGATTCCTACTCTTCTCGCA 135454
|| || ||||| || || | |||||||| ||| | ||||| |||||| | || ||
Sbjct 36947 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 36888
Query 135455 GCTGCTATCTGCTTT-ATTGTTGCTTTCATCGCTGCACCTCCCGTCGATATTGACGGCAT 135513
|| || || | || || || || || || ||||| ||||| || ||||| || || ||
Sbjct 36887 GCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTAT 36829
Query 135514 CCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAACATCATCTCTGGTGCTGTTAT 135573
||| || || || |||| || || ||||||||||| |||||||||||||||||||| ||
Sbjct 36828 CCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAAT 36769
Query 135574 CCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCATCTGGGAAGCTGCTTCTCTTGA 135633
|||| | ||||| ||||| ||||||||||| || ||||||||||| |||||||||||
Sbjct 36768 CCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGA 36709
Query 135634 TGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGGTCTTCCACTTCCTTATCGGTGT 135693
||||||||| || || ||||||||||| || || | || | |||||| | ||||| |
Sbjct 36708 TGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAAT 36649
Query 135694 CTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACCGACTGGGTATGCGCCCTTGGAT 135753
| || ||||||||||| |||||||| || |||| ||| | || ||||| ||||||||
Sbjct 36648 TTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGAT 36589
Query 135754 TTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGCTGTTTTCCTGGTCTACCCCTT 135813
| ||| |||||||| || ||||| || || || || ||||| ||| | || ||||| |
Sbjct 36588 TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAAT 36529
Query 135814 TGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCATTTCTGGAACTTTTAACTACAT 135873
|| || ||||||||| |||||| ||||| ||||| |||||||||||||| |||| |||
Sbjct 36528 CGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCAT 36469
Query 135874 GCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATCCTTTCCACATGTTGGGAGTTGC 135933
| | || |||||||| || |||||||| || ||||| || ||||||||| | || |||||
Sbjct 36468 GATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGC 36409
Query 135934 TGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGGATCTCTTGTCACCTCTAGTCT 135993
||| || ||||||||||| || |||||||| ||||| || || || || || || |||
Sbjct 36408 TGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCT 36349
Query 135994 TGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 136053
| |||||||| |||||| || || ||| || ||||||||||| ||||||||
Sbjct 36348 CATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGA 36289
Query 136054 AGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGGTCGTCTGATCTTCCAATATGC 136113
||||||||||||||| || ||||| || ||||||||||| ||||| ||||||||||| ||
Sbjct 36288 AGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGC 36229
Query 136114 GTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTGCTGCTTGGCCTGTTGTCGGTAT 136173
|| ||||||||||| ||||| || ||||| ||||| || ||||| || | || ||
Sbjct 36228 TTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAAT 36169
Query 136174 CTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCAACCTCAATGGATTCAACTTCAA 136233
|||||| | || |||| | || || ||||| |||||||| || ||||||||||||||
Sbjct 36168 CTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAA 36109
Query 136234 CCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACACCTGGGCAGATGTGCTGAATCG 136293
|||||| | ||| ||| | || |||||| | ||||| ||||| ||| | | || ||
Sbjct 36108 CCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCG 36049
Query 136294 TGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327
|||| || |||||||| || ||||||||||||
Sbjct 36048 TGCTAACCTCGGTATGGAAGTAATGCACGAGCGT 36015
Score = 583 bits (646), Expect = 1e-161
Identities = 750/1029 (73%), Gaps = 4/1029 (0%)
Strand=Plus/Plus
Query 137851 AACAGAGAGGATGGTTCGATGTCTTGGATGACTGGATTAAACGAGATCGCTTTGTATTTG 137910
|| || | |||||||| || | | || |||||| |||| || ||||| || ||||| |
Sbjct 1981 AAAAGCGCGGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCG 2040
Query 137911 TGGGTTGGTCTGGACTACTACTTTTTCCCAC-TGCTTATTTGGCCCTTGGTGGCTGGCTT 137969
| |||||||| ||| | || || |||||| ||| || || || ||||||| ||| ||
Sbjct 2041 TAGGTTGGTCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTT 2099
Query 137970 ACTGGCACAACGTTTGTTACAAGCTGGTACACCCACGGGTTGGCGTCTAGTTATCTTGAA 138029
||||| ||||| || || || |||||||| ||||| || || | || |||||
Sbjct 2100 ACTGGAACAACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAG 2159
Query 138030 GGCGCTAATTTCCTCACAGCAGCTGTTTCGACTCCTGCTGATGCTATGGGTCATTCTCTT 138089
|| ||| ||||| ||| | || || || || || || | ||||| ||| || |||
Sbjct 2160 GGATGTAACTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTT 2219
Query 138090 CTTCTACTTTGGGGTCCTGAGTCTCAAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGA 138149
||||| |||||||| || || | ||||| || || || |||| || ||||| |||
Sbjct 2220 CTTCTCCTTTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGA 2279
Query 138150 CTCTGGACTTTTGTGGCGCTCCACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAG 138209
| ||||| || || || || ||||| || || | | || ||||| ||||| || ||
Sbjct 2280 TTATGGACATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAA 2339
Query 138210 TTTGAGATCTCTCGTCTGGTAGGCATCCGTCCCTACAACGCAATCGCATTCTCTGGTCCC 138269
||||| || | ||| ||| || ||||| |||||||| || |||||||| | ||
Sbjct 2340 TTTGAAATTGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCT 2399
Query 138270 ATCGCTGTGTTCGTCAGCGTGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTT 138329
|||||||| || || || ||||| || || || | || ||||| | |||||||||
Sbjct 2400 ATCGCTGTATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTT 2459
Query 138330 GCTCCCTCCTTTGGTGTGGCAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCAT 138389
|| || || |||||||| || | ||| ||||| ||| | | ||| | || || |||||
Sbjct 2460 GCACCTTCATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCAC 2519
Query 138390 AACTGGACCCTCAACCCCTTTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTG 138449
|||||||| || ||||| || || |||||||| ||||| ||| | ||||| | || ||
Sbjct 2520 AACTGGACACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTT 2579
Query 138450 CTCTGTGCTATTCATGGTGCTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCA 138509
|| ||||| ||||| || || || ||||| || || | | |||||||| || |||
Sbjct 2580 CTTTGTGCGATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCA 2639
Query 138510 AATACTTTTAAAGCATTTGAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCT 138569
|| ||||| |||||| | || ||||||| ||||| || || |||||||| || ||
Sbjct 2640 AACACTTTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCA 2699
Query 138570 AACCGTTACTGGTCGCAAATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTC 138629
||||||| |||||| || || || || | ||||| ||| ||||||||||||||||||
Sbjct 2700 AACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTC 2759
Query 138630 TTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACTAGTAGTA-TTGGTATTATTGGTCT 138688
|||||||| || || || || | || | |||| | || | ||||| || | || |
Sbjct 2760 TTTATGCTTTTCGTACCTGTAACAGGGTTATGGA-TGTCAGCACTTGGTGTTGTAGGATT 2818
Query 138689 TGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCC 138748
|| |||||||| || || || || |||||||| ||||| || |||||||| ||||||||
Sbjct 2819 AGCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCC 2878
Query 138749 TGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGAT 138808
||| || || || |||||||| ||||| |||||||| || |||||| | ||||| |||||
Sbjct 2879 TGAGTTTGAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGAT 2938
Query 138809 GGCTCCTGTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGG 138868
||| || ||||| ||||| |||||| |||| || ||||| || ||| | ||| | ||
Sbjct 2939 GGCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGG 2998
Query 138869 CAACGCTCT 138877
||||||||
Sbjct 2999 AAACGCTCT 3007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627967850857600
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