Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq19 740 0.0
>seq19
Length=72585
Score = 740 bits (820), Expect = 0.0
Identities = 754/982 (77%), Gaps = 6/982 (1%)
Strand=Plus/Plus
Query 211579 TGGGTAACATCAACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTCTTATGATCCCA 211638
||| | || ||||| | ||| | | || | |||||||| || || | ||||||||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 211639 TGTCTTCTAGCTGCAACAACATGCTTTATCGTAGCATTCATCGCAGCACCTCCCGTTGAT 211698
| | || | ||||| || || ||||||||||| || || || ||||| || |||
Sbjct 10244 ACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGAT 10303
Query 211699 ATCGACGGAATCCGTGAACCAGTAGCTGGTTCATTCATGTATGGTAACAACATCATCTCT 211758
||||| || |||||||| |||||| |||| ||| | ||||| || |||||||||||||||
Sbjct 10304 ATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 10363
Query 211759 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTTTACACTTCTATCCTATCTGGGAAGCA 211818
||||| || | || | || ||||| ||||| | |||||||| || ||||||||||||
Sbjct 10364 GGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 10423
Query 211819 GCAACTCTTGATGAGTGGCTCTACAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTC 211878
|| |||||||||||||||| ||||| ||||||||||||||| | | | | ||||||
Sbjct 10424 GCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTC 10483
Query 211879 CTTATCGGAATCTCAGCATACATGGGAAGACAGTGGGAACTTTCATACCGTTTAGGTATG 211938
| |||||||| | |||||||||| | ||||||| ||||| | ||||||||| |||
Sbjct 10484 TTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATG 10543
Query 211939 CGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTT 211998
||||||||||| ||| ||||| || || |||||| ||||||| ||||||||| |
Sbjct 10544 CGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATC 10603
Query 211999 GTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACA 212058
|| |||||| ||||||||||||| ||||| || || |||||| | ||||| || |||||
Sbjct 10604 GTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACT 10663
Query 212059 TTCAACTTCATGTTCGTATTCCAAGCAGAACATAACATCCTTATGCACCCATTCCATATG 212118
|||||||||||| |||||||||| || || || ||||||||||||||||||||||| |||
Sbjct 10664 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 10723
Query 212119 GCAGGTGTTGCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTT 212178
|||||||| ||| | |||||||| || | |||||||| ||||||||||| || ||
Sbjct 10724 CTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTA 10783
Query 212179 ACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTATGGTTACAAGTTC 212238
|| || || || |||||||| || |||| || || ||| || |||||||||
Sbjct 10784 ACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTC 10843
Query 212239 GGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTCGGTAGACTTATC 212298
||||||||||||||||| || |||||||| |||||||| || |||||||| | ||||||
Sbjct 10844 GGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATC 10903
Query 212299 TTCCAGTATGCATCATTCAACAACAGCAGAAGTT---TACACTTCTTCCTCGCATCATGG 212355
||||| || || ||||||||||| | | ||| | ||||||||||||||| |||
Sbjct 10904 TTCCAATACGCTTCATTCAACAA---CTCACGTTCACTCCACTTCTTCCTCGCAATCTGG 10960
Query 212356 CCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACCTAAAT 212415
|| || || | | ||||| || |||||||||| | || ||||| |||||||| ||
Sbjct 10961 CCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAAC 11020
Query 212416 GGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTACTTGGGGT 212475
||||||||||||||||| || || || ||| || || || || || |||| |
Sbjct 11021 GGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCT 11080
Query 212476 GATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACACAAC 212535
||| | | ||| | || ||||| ||||||||||| |||||||| | || || ||||||
Sbjct 11081 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 11140
Query 212536 TTCCCACTTGACTTAGCATCTG 212557
|||||||||||| | |||||||
Sbjct 11141 TTCCCACTTGACCTTGCATCTG 11162
Score = 740 bits (820), Expect = 0.0
Identities = 754/982 (77%), Gaps = 6/982 (1%)
Strand=Plus/Minus
Query 211579 TGGGTAACATCAACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTCTTATGATCCCA 211638
||| | || ||||| | ||| | | || | |||||||| || || | ||||||||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 211639 TGTCTTCTAGCTGCAACAACATGCTTTATCGTAGCATTCATCGCAGCACCTCCCGTTGAT 211698
| | || | ||||| || || ||||||||||| || || || ||||| || |||
Sbjct 36899 ACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGAT 36840
Query 211699 ATCGACGGAATCCGTGAACCAGTAGCTGGTTCATTCATGTATGGTAACAACATCATCTCT 211758
||||| || |||||||| |||||| |||| ||| | ||||| || |||||||||||||||
Sbjct 36839 ATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 36780
Query 211759 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTTTACACTTCTATCCTATCTGGGAAGCA 211818
||||| || | || | || ||||| ||||| | |||||||| || ||||||||||||
Sbjct 36779 GGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 36720
Query 211819 GCAACTCTTGATGAGTGGCTCTACAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTC 211878
|| |||||||||||||||| ||||| ||||||||||||||| | | | | ||||||
Sbjct 36719 GCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTC 36660
Query 211879 CTTATCGGAATCTCAGCATACATGGGAAGACAGTGGGAACTTTCATACCGTTTAGGTATG 211938
| |||||||| | |||||||||| | ||||||| ||||| | ||||||||| |||
Sbjct 36659 TTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATG 36600
Query 211939 CGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTT 211998
||||||||||| ||| ||||| || || |||||| ||||||| ||||||||| |
Sbjct 36599 CGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATC 36540
Query 211999 GTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACA 212058
|| |||||| ||||||||||||| ||||| || || |||||| | ||||| || |||||
Sbjct 36539 GTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACT 36480
Query 212059 TTCAACTTCATGTTCGTATTCCAAGCAGAACATAACATCCTTATGCACCCATTCCATATG 212118
|||||||||||| |||||||||| || || || ||||||||||||||||||||||| |||
Sbjct 36479 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 36420
Query 212119 GCAGGTGTTGCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTT 212178
|||||||| ||| | |||||||| || | |||||||| ||||||||||| || ||
Sbjct 36419 CTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTA 36360
Query 212179 ACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTATGGTTACAAGTTC 212238
|| || || || |||||||| || |||| || || ||| || |||||||||
Sbjct 36359 ACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTC 36300
Query 212239 GGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTCGGTAGACTTATC 212298
||||||||||||||||| || |||||||| |||||||| || |||||||| | ||||||
Sbjct 36299 GGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATC 36240
Query 212299 TTCCAGTATGCATCATTCAACAACAGCAGAAGTT---TACACTTCTTCCTCGCATCATGG 212355
||||| || || ||||||||||| | | ||| | ||||||||||||||| |||
Sbjct 36239 TTCCAATACGCTTCATTCAACAA---CTCACGTTCACTCCACTTCTTCCTCGCAATCTGG 36183
Query 212356 CCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACCTAAAT 212415
|| || || | | ||||| || |||||||||| | || ||||| |||||||| ||
Sbjct 36182 CCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAAC 36123
Query 212416 GGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTACTTGGGGT 212475
||||||||||||||||| || || || ||| || || || || || |||| |
Sbjct 36122 GGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCT 36063
Query 212476 GATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACACAAC 212535
||| | | ||| | || ||||| ||||||||||| |||||||| | || || ||||||
Sbjct 36062 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 36003
Query 212536 TTCCCACTTGACTTAGCATCTG 212557
|||||||||||| | |||||||
Sbjct 36002 TTCCCACTTGACCTTGCATCTG 35981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807555008205640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |