Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq19 740 0.0 >seq19 Length=72585 Score = 740 bits (820), Expect = 0.0 Identities = 754/982 (77%), Gaps = 6/982 (1%) Strand=Plus/Plus Query 211579 TGGGTAACATCAACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTCTTATGATCCCA 211638 ||| | || ||||| | ||| | | || | |||||||| || || | |||||||| Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 211639 TGTCTTCTAGCTGCAACAACATGCTTTATCGTAGCATTCATCGCAGCACCTCCCGTTGAT 211698 | | || | ||||| || || ||||||||||| || || || ||||| || ||| Sbjct 10244 ACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGAT 10303 Query 211699 ATCGACGGAATCCGTGAACCAGTAGCTGGTTCATTCATGTATGGTAACAACATCATCTCT 211758 ||||| || |||||||| |||||| |||| ||| | ||||| || ||||||||||||||| Sbjct 10304 ATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 10363 Query 211759 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTTTACACTTCTATCCTATCTGGGAAGCA 211818 ||||| || | || | || ||||| ||||| | |||||||| || |||||||||||| Sbjct 10364 GGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 10423 Query 211819 GCAACTCTTGATGAGTGGCTCTACAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTC 211878 || |||||||||||||||| ||||| ||||||||||||||| | | | | |||||| Sbjct 10424 GCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTC 10483 Query 211879 CTTATCGGAATCTCAGCATACATGGGAAGACAGTGGGAACTTTCATACCGTTTAGGTATG 211938 | |||||||| | |||||||||| | ||||||| ||||| | ||||||||| ||| Sbjct 10484 TTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATG 10543 Query 211939 CGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTT 211998 ||||||||||| ||| ||||| || || |||||| ||||||| ||||||||| | Sbjct 10544 CGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATC 10603 Query 211999 GTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACA 212058 || |||||| ||||||||||||| ||||| || || |||||| | ||||| || ||||| Sbjct 10604 GTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACT 10663 Query 212059 TTCAACTTCATGTTCGTATTCCAAGCAGAACATAACATCCTTATGCACCCATTCCATATG 212118 |||||||||||| |||||||||| || || || ||||||||||||||||||||||| ||| Sbjct 10664 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 10723 Query 212119 GCAGGTGTTGCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTT 212178 |||||||| ||| | |||||||| || | |||||||| ||||||||||| || || Sbjct 10724 CTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTA 10783 Query 212179 ACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTATGGTTACAAGTTC 212238 || || || || |||||||| || |||| || || ||| || ||||||||| Sbjct 10784 ACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTC 10843 Query 212239 GGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTCGGTAGACTTATC 212298 ||||||||||||||||| || |||||||| |||||||| || |||||||| | |||||| Sbjct 10844 GGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATC 10903 Query 212299 TTCCAGTATGCATCATTCAACAACAGCAGAAGTT---TACACTTCTTCCTCGCATCATGG 212355 ||||| || || ||||||||||| | | ||| | ||||||||||||||| ||| Sbjct 10904 TTCCAATACGCTTCATTCAACAA---CTCACGTTCACTCCACTTCTTCCTCGCAATCTGG 10960 Query 212356 CCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACCTAAAT 212415 || || || | | ||||| || |||||||||| | || ||||| |||||||| || Sbjct 10961 CCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAAC 11020 Query 212416 GGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTACTTGGGGT 212475 ||||||||||||||||| || || || ||| || || || || || |||| | Sbjct 11021 GGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCT 11080 Query 212476 GATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACACAAC 212535 ||| | | ||| | || ||||| ||||||||||| |||||||| | || || |||||| Sbjct 11081 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 11140 Query 212536 TTCCCACTTGACTTAGCATCTG 212557 |||||||||||| | ||||||| Sbjct 11141 TTCCCACTTGACCTTGCATCTG 11162 Score = 740 bits (820), Expect = 0.0 Identities = 754/982 (77%), Gaps = 6/982 (1%) Strand=Plus/Minus Query 211579 TGGGTAACATCAACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTCTTATGATCCCA 211638 ||| | || ||||| | ||| | | || | |||||||| || || | |||||||| Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 211639 TGTCTTCTAGCTGCAACAACATGCTTTATCGTAGCATTCATCGCAGCACCTCCCGTTGAT 211698 | | || | ||||| || || ||||||||||| || || || ||||| || ||| Sbjct 36899 ACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGAT 36840 Query 211699 ATCGACGGAATCCGTGAACCAGTAGCTGGTTCATTCATGTATGGTAACAACATCATCTCT 211758 ||||| || |||||||| |||||| |||| ||| | ||||| || ||||||||||||||| Sbjct 36839 ATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 36780 Query 211759 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTTTACACTTCTATCCTATCTGGGAAGCA 211818 ||||| || | || | || ||||| ||||| | |||||||| || |||||||||||| Sbjct 36779 GGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 36720 Query 211819 GCAACTCTTGATGAGTGGCTCTACAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTC 211878 || |||||||||||||||| ||||| ||||||||||||||| | | | | |||||| Sbjct 36719 GCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTC 36660 Query 211879 CTTATCGGAATCTCAGCATACATGGGAAGACAGTGGGAACTTTCATACCGTTTAGGTATG 211938 | |||||||| | |||||||||| | ||||||| ||||| | ||||||||| ||| Sbjct 36659 TTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATG 36600 Query 211939 CGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTT 211998 ||||||||||| ||| ||||| || || |||||| ||||||| ||||||||| | Sbjct 36599 CGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATC 36540 Query 211999 GTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGTATATCAGGAACA 212058 || |||||| ||||||||||||| ||||| || || |||||| | ||||| || ||||| Sbjct 36539 GTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACT 36480 Query 212059 TTCAACTTCATGTTCGTATTCCAAGCAGAACATAACATCCTTATGCACCCATTCCATATG 212118 |||||||||||| |||||||||| || || || ||||||||||||||||||||||| ||| Sbjct 36479 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 36420 Query 212119 GCAGGTGTTGCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTT 212178 |||||||| ||| | |||||||| || | |||||||| ||||||||||| || || Sbjct 36419 CTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTA 36360 Query 212179 ACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTATGGTTACAAGTTC 212238 || || || || |||||||| || |||| || || ||| || ||||||||| Sbjct 36359 ACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTC 36300 Query 212239 GGACAAGAAGAAGAGACATATAACATCGTTGCTGCACATGGATACTTCGGTAGACTTATC 212298 ||||||||||||||||| || |||||||| |||||||| || |||||||| | |||||| Sbjct 36299 GGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATC 36240 Query 212299 TTCCAGTATGCATCATTCAACAACAGCAGAAGTT---TACACTTCTTCCTCGCATCATGG 212355 ||||| || || ||||||||||| | | ||| | ||||||||||||||| ||| Sbjct 36239 TTCCAATACGCTTCATTCAACAA---CTCACGTTCACTCCACTTCTTCCTCGCAATCTGG 36183 Query 212356 CCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACCTAAAT 212415 || || || | | ||||| || |||||||||| | || ||||| |||||||| || Sbjct 36182 CCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAAC 36123 Query 212416 GGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTACTTGGGGT 212475 ||||||||||||||||| || || || ||| || || || || || |||| | Sbjct 36122 GGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCT 36063 Query 212476 GATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACACAAC 212535 ||| | | ||| | || ||||| ||||||||||| |||||||| | || || |||||| Sbjct 36062 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 36003 Query 212536 TTCCCACTTGACTTAGCATCTG 212557 |||||||||||| | ||||||| Sbjct 36002 TTCCCACTTGACCTTGCATCTG 35981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807555008205640