Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq6 127 2e-24 seq1 96.9 3e-15 >seq6 Length=1431126 Score = 127 bits (140), Expect = 2e-24 Identities = 205/289 (71%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 71657 TTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCT-ACGCAA 71715 || |||||| | |||||| || || || ||||| || || ||| |||| ||||| Sbjct 799390 TTGGAGCATTCGCGAACGCACGACGAGCTCTGGAACGCGGCGCAGAAGGAGCTGACGCAC 799449 Query 71716 TGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGAC 71775 ||| | || ||||| | ||| ||||||||||||||||| ||||| || |||||||| Sbjct 799450 CT-GGGCACCATGCACGGGTTCCTGCGCATGTACTGGGCCAAGAAGATCCTGGAGTGGAC 799508 Query 71776 TC---AAACTCCCGAGCAGGCGCT-CGAGTATTCTATTTATCTAAACGATAGATACAGTC 71831 | || ||| ||||||| ||| | |||||||| ||||| || ||| | Sbjct 799509 CGGCGAGGGACCGGAGGAGGCGCTGCGACGGG-CGATTTATCTCAACGACAGGTACCAGC 799567 Query 71832 TCGACGGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACG 71891 | |||||||||||||| || ||||| ||||| ||||||||| ||| ||||| |||||| Sbjct 799568 TGGACGGTCGCGATCCGAATGGTTACGTCGGGTGCATGTGGGCCATCTGCGGGGTTCACG 799627 Query 71892 ATAGAAGCTTTTTAGAACGTCAAGTGTTTGGTAAAATTCGCTATATGAA 71940 | ||| ||| || | ||||| || || |||| || ||||| Sbjct 799628 ACCAGGGCTGGAAAGAGCGCGACGTGTTCGGAAAGGTTCGGTACATGAA 799676 >seq1 Length=2053059 Score = 96.9 bits (106), Expect = 3e-15 Identities = 215/317 (68%), Gaps = 8/317 (3%) Strand=Plus/Plus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGC--GACA-GCTACGCAATGAGGGTAAAATT 71728 || |||||||| |||||||| || || ||| || | | | | | | || || || Sbjct 927598 ACTCATGATGATCTATGGAACGCAGCACAGTTGGAAATGGTGCAC---GGCGGCAAGATG 927654 Query 71729 CACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAG 71788 ||||| | | |||||||| ||||| || ||||| | || ||||| || |||| || Sbjct 927655 CACGGTTTTATGCGCATGTATTGGGCAAAGAAGATCATGGAATGGACAGAATCTCCAGAT 927714 Query 71789 CAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATA-CAGTCTCGACGGTCGCGATCC 71847 || || ||||||| | ||| |||| ||||| | ||| ||| || || ||||| || || Sbjct 927715 CAAGCTCTCGAGTTCGCCATTCATCTCAACGACAAATATCAG-CTGGATGGTCGTGACCC 927773 Query 71848 TAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGA 71907 | || ||||| |||||||||||| || || | || || | ||| | ||| Sbjct 927774 TTCAGGATATGTGGGTTGCATGTGGTCGATCGTGGGAGTCCATGACCAAGGCTGGTCAGA 927833 Query 71908 ACGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAA 71967 || | | | ||||| || || || |||||| | | ||| |||| | |||||||| Sbjct 927834 GCGCCCAATATTTGGAAAGATACGTTATATGGCTTACAGTGGATGCGTAAAAAAGTTCAA 927893 Query 71968 TGTGAAACAATACATTA 71984 || || | ||||||| Sbjct 927894 GGTACAAGACTACATTA 927910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662286317680