Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq6 127 2e-24
seq1 96.9 3e-15
>seq6
Length=1431126
Score = 127 bits (140), Expect = 2e-24
Identities = 205/289 (71%), Gaps = 7/289 (2%)
Strand=Plus/Plus
Query 71657 TTCGAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCT-ACGCAA 71715
|| |||||| | |||||| || || || ||||| || || ||| |||| |||||
Sbjct 799390 TTGGAGCATTCGCGAACGCACGACGAGCTCTGGAACGCGGCGCAGAAGGAGCTGACGCAC 799449
Query 71716 TGAGGGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGAC 71775
||| | || ||||| | ||| ||||||||||||||||| ||||| || ||||||||
Sbjct 799450 CT-GGGCACCATGCACGGGTTCCTGCGCATGTACTGGGCCAAGAAGATCCTGGAGTGGAC 799508
Query 71776 TC---AAACTCCCGAGCAGGCGCT-CGAGTATTCTATTTATCTAAACGATAGATACAGTC 71831
| || ||| ||||||| ||| | |||||||| ||||| || ||| |
Sbjct 799509 CGGCGAGGGACCGGAGGAGGCGCTGCGACGGG-CGATTTATCTCAACGACAGGTACCAGC 799567
Query 71832 TCGACGGTCGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACG 71891
| |||||||||||||| || ||||| ||||| ||||||||| ||| ||||| ||||||
Sbjct 799568 TGGACGGTCGCGATCCGAATGGTTACGTCGGGTGCATGTGGGCCATCTGCGGGGTTCACG 799627
Query 71892 ATAGAAGCTTTTTAGAACGTCAAGTGTTTGGTAAAATTCGCTATATGAA 71940
| ||| ||| || | ||||| || || |||| || |||||
Sbjct 799628 ACCAGGGCTGGAAAGAGCGCGACGTGTTCGGAAAGGTTCGGTACATGAA 799676
>seq1
Length=2053059
Score = 96.9 bits (106), Expect = 3e-15
Identities = 215/317 (68%), Gaps = 8/317 (3%)
Strand=Plus/Plus
Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGC--GACA-GCTACGCAATGAGGGTAAAATT 71728
|| |||||||| |||||||| || || ||| || | | | | | | || || ||
Sbjct 927598 ACTCATGATGATCTATGGAACGCAGCACAGTTGGAAATGGTGCAC---GGCGGCAAGATG 927654
Query 71729 CACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAG 71788
||||| | | |||||||| ||||| || ||||| | || ||||| || |||| ||
Sbjct 927655 CACGGTTTTATGCGCATGTATTGGGCAAAGAAGATCATGGAATGGACAGAATCTCCAGAT 927714
Query 71789 CAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATA-CAGTCTCGACGGTCGCGATCC 71847
|| || ||||||| | ||| |||| ||||| | ||| ||| || || ||||| || ||
Sbjct 927715 CAAGCTCTCGAGTTCGCCATTCATCTCAACGACAAATATCAG-CTGGATGGTCGTGACCC 927773
Query 71848 TAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTCTTCACGATAGAAGCTTTTTAGA 71907
| || ||||| |||||||||||| || || | || || | ||| | |||
Sbjct 927774 TTCAGGATATGTGGGTTGCATGTGGTCGATCGTGGGAGTCCATGACCAAGGCTGGTCAGA 927833
Query 71908 ACGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACGCAAGTTCAA 71967
|| | | | ||||| || || || |||||| | | ||| |||| | ||||||||
Sbjct 927834 GCGCCCAATATTTGGAAAGATACGTTATATGGCTTACAGTGGATGCGTAAAAAAGTTCAA 927893
Query 71968 TGTGAAACAATACATTA 71984
|| || | |||||||
Sbjct 927894 GGTACAAGACTACATTA 927910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662286317680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |