Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 318 2e-81 >seq1 Length=2053059 Score = 318 bits (352), Expect = 2e-81 Identities = 631/926 (68%), Gaps = 15/926 (2%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| || ||||| ||||| ||| ||||| || || | || | || || || Sbjct 2014232 TTCGGCTACAAGACTCTGGAGCGATCGTACCTCCTCCGCGTCGACGGCAAGATCGTGGAG 2014291 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 ||||| ||||| || | ||||| || || || || ||||| | |||||| || Sbjct 2014292 CGCCCCCAGCACCTGCTCATGCGCGTCGCCATCGGCATCCA---CAAGGATGTGGAGAAG 2014348 Query 363511 GCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAA 363568 || || || || || | | ||| | || | || || || ||||| | || || Sbjct 2014349 GCCATCGACACCTACCACATGCTCTCCGAGCGC-TGGATG-ACCCACGCGTCCCCCACGC 2014406 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 | | ||| | || || | || ||| |||| || || || || | ||||||| Sbjct 2014407 TCTTCAACTCGGGTACCCCCCGCCCCCAGCTGTCGTCGTGTTTCCTCATCGCCATGAAGG 2014466 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | |||||||||||||| |||| || || || ||| | || || || |||||| | Sbjct 2014467 AGGATTCCATCGAGGGCATCTACGATACCCTCAAGGAGTGCGCGTGCATCTCCAAGTCCG 2014526 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGT-TACATTCGCGGC 363747 | ||||| || ||| | || |||||| | | || || || | ||||| |||||| Sbjct 2014527 CCGGCGGCATCGGTCTGTCCATCCACGACATCCGCGC-CACCTCTTCCTACATCCGCGGC 2014585 Query 363748 ACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGG 363807 || ||| ||| || || | | ||||||||||| || ||| || | || |||||| Sbjct 2014586 ACCAACGGAACCTCCAACGGCATCATCCCCATGCTTCGCGTCTTTAACGACACCGCGAGG 2014645 Query 363808 TACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCAT 363867 |||||||||||||| || || ||| | ||||| || || || || || |||||||| Sbjct 2014646 TACGTCGACCAGGGCGGCGGCAAGAGGAAAGGCGCATTCGCCATCTACCTCGAGCCGTGG 2014705 Query 363868 CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGT 363927 || || || || || || | || || ||||| || ||| || || ||||| |||| Sbjct 2014706 CACGCGGACATCTTCGACTGGCTCGACCTCCGCAAGAACCACGGCAAGGAGGAGGCGCGT 2014765 Query 363928 GCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCA 363987 || | || |||||||| | || ||| || | || ||||||||||| ||||| Sbjct 2014766 GCCAGGGACCTGTTCTACGGCCTGTGGACCAACGATCTGTTCATGAAGCGCGTCGAGGCT 2014825 Query 363988 ---GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 || || ||| | ||||| ||||| ||||| || ||||| | ||| ||| Sbjct 2014826 AACGGCGAG---TGGACCCTCTTCTGCCCCAACGAAGCCCCGGGTCTCGCGGATTGCTGG 2014882 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || || | | ||||| ||||||||||| || ||||||| |||| | ||||| Sbjct 2014883 GGCGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGGCGGAGGGCAAGGGTAAGAAGACG 2014942 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 | || ||| |||| ||||| |||||| | || || ||| ||||||| || | || Sbjct 2014943 GTCAAGGCCCAGCAGCTCTGGTTCGCCATCCTCGAGTCCCAGGTTGAGACTGGTAACCCG 2015002 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 || ||| | | ||| ||| |||||||||||||||||||||||||| |||| || || || Sbjct 2015003 TACATGCTCTTCAAGGATGCGTGCAACCGCAAGTCCAACCAGCAGAACCTCGGCACCATC 2015062 Query 364225 CAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 | |||||| || ||||||||| | || |||||| | || || ||||| || || Sbjct 2015063 CGATCCTCCAACCTCTGCACCGAGATTGTCGAGTACACCTCGCCGGAGGAGACCGCGGTG 2015122 Query 364285 TGTAACCTTGCGTCGATCGCGCTTCC 364310 || ||||| ||||| |||||||| || Sbjct 2015123 TGCAACCTCGCGTCCATCGCGCTGCC 2015148 Score = 109 bits (120), Expect = 1e-18 Identities = 283/427 (66%), Gaps = 7/427 (2%) Strand=Plus/Plus Query 364732 CGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAAC 364791 ||||||||||| | |||||||||||||| || || || | ||||| | || ||| Sbjct 2015648 CGCAACTCCCTGCTGGTGGCGCCCATGCCCACCGCGTCCACGTCCCAGATTTTGGGCAAC 2015707 Query 364792 AACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAA 364851 |||||||||||||| |||| || ||| | || | ||||| || || ||||| || Sbjct 2015708 AACGAGTGCTTCGAGCCGTACACCTCCAACATCTACGCCCGCCGCGTGCTCTCCGGCGAG 2015767 Query 364852 TTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGAC 364911 || | || || || || |||| || || || |||| || || |||| | Sbjct 2015768 TTCACCGTCGTGAACCAGCACCTCCTCTCCGACCTCACCGAGATGGGCCTCTGGGACCCC 2015827 Query 364912 AGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGA-TTTCC 364970 ||| | |||||| | |||||||| || || || || ||| | | ||| | || Sbjct 2015828 AGCCTCAAGAACGAGCTCATCGCCAACAACGGCTCCGTCCAG----TCGCTGGACATCCC 2015883 Query 364971 AGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGA 365030 || | || ||| || ||||| || || ||||| || ||| | ||| | || Sbjct 2015884 CGACAACCTCAAGGAGATCTACAAGACGGTCTGGGAGATCAAGCAGCGCATCCTCGTGGA 2015943 Query 365031 TATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGAC 365090 ||||| ||||| ||||| || || ||| ||| |||||||| ||||| |||| | Sbjct 2015944 CATGGCCGCCGACCGCGGCGCCTTCATCGACCAGTCGCAGTCGTTCAACGTGCACATGTC 2016003 Query 365091 TCA-GCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTA 365149 | ||||| | || ||||| || || |||| || |||| |||||| || |||| Sbjct 2016004 CGACGCCAA-CAGCGGTAAGCTGACGTCGCTGCACTTTTACGCGTGGAAGAAGGGCCTTA 2016062 Query 365150 AGACAGG 365156 | || || Sbjct 2016063 AAACCGG 2016069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353282714858