Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 1e-15 >seq5 Length=1518631 Score = 98.7 bits (108), Expect = 1e-15 Identities = 246/365 (67%), Gaps = 24/365 (7%) Strand=Plus/Minus Query 126034 GACCAGCCGGTCCCAATGCCGACCGACCCGTTGACCAGCACCAGCGGAATGATGGGCACA 126093 |||||||| || || |||||| | | ||||||||||| ||||| || | ||| || | Sbjct 240266 GACCAGCCTGTGCCGATGCCGTCGGCGCCGTTGACCAGAACCAGGGGCAGGATCGGAAGG 240207 Query 126094 AAGTGGACCGGCTCAC---CCT--CCGAGCTCTGC-------TCCAAGATGGGGTCGTCC 126141 |||| | || ||| ||| ||| ||| | || | || || |||||| Sbjct 240206 TAGTGCTCGGGTTCAATCACCTGGCCGTCCTCGTCGAGGTAGTCGAGGAGGGCGTCGTCG 240147 Query 126142 TCCTCGCGGAAAATGTAG-GGTAGAATCTTGTGCG---GTTTGGTGTAAATGTAGCGGGG 126197 |||| |||||||| | || ||| || ||| | ||||| ||||||| ||||| Sbjct 240146 CACTCGGGGAAAATGACGCGGCAGA----TGGGCGCGAGCCTGGTGAAAATGTAACGGGG 240091 Query 126198 AGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAA 126257 | || ||||| || |||| || || || || ||||| ||| ||| ||| || Sbjct 240090 GGACGCGTGGTCCTTACCGCCCTGCAGGCGGGTACCGAACTGGCCGGAGGGCACCAGCAG 240031 Query 126258 CTGCACATTGTTGGCTCCC-ACAAAGTCCTGCGCAAACTTGACAATGGTCT-CGCACAGG 126315 | ||| |||||| ||||| ||||| || ||||| | ||| ||||| ||| ||| Sbjct 240030 GTTCACGTTGTTG-CTCCCGACAAAATCTTGCGCGAGGCCGACGATGGTGGACGCG-AGG 239973 Query 126316 TTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACC 126375 | ||||||||| | ||| ||| ||||| | |||||||| ||||||||||| Sbjct 239972 CTGGCCTCGCCGTGGTGGTACGCGGAGTGCTCAGAGACGTAGCCCGAGAGCTGCGCAACT 239913 Query 126376 TTGAT 126380 ||||| Sbjct 239912 TTGAT 239908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611391854794400