Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_008187.1
Length=191100
Score E
Sequences producing significant alignments: (Bits) Value
seq5 98.7 1e-15
>seq5
Length=1518631
Score = 98.7 bits (108), Expect = 1e-15
Identities = 246/365 (67%), Gaps = 24/365 (7%)
Strand=Plus/Minus
Query 126034 GACCAGCCGGTCCCAATGCCGACCGACCCGTTGACCAGCACCAGCGGAATGATGGGCACA 126093
|||||||| || || |||||| | | ||||||||||| ||||| || | ||| || |
Sbjct 240266 GACCAGCCTGTGCCGATGCCGTCGGCGCCGTTGACCAGAACCAGGGGCAGGATCGGAAGG 240207
Query 126094 AAGTGGACCGGCTCAC---CCT--CCGAGCTCTGC-------TCCAAGATGGGGTCGTCC 126141
|||| | || ||| ||| ||| ||| | || | || || ||||||
Sbjct 240206 TAGTGCTCGGGTTCAATCACCTGGCCGTCCTCGTCGAGGTAGTCGAGGAGGGCGTCGTCG 240147
Query 126142 TCCTCGCGGAAAATGTAG-GGTAGAATCTTGTGCG---GTTTGGTGTAAATGTAGCGGGG 126197
|||| |||||||| | || ||| || ||| | ||||| ||||||| |||||
Sbjct 240146 CACTCGGGGAAAATGACGCGGCAGA----TGGGCGCGAGCCTGGTGAAAATGTAACGGGG 240091
Query 126198 AGCTGCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAA 126257
| || ||||| || |||| || || || || ||||| ||| ||| ||| ||
Sbjct 240090 GGACGCGTGGTCCTTACCGCCCTGCAGGCGGGTACCGAACTGGCCGGAGGGCACCAGCAG 240031
Query 126258 CTGCACATTGTTGGCTCCC-ACAAAGTCCTGCGCAAACTTGACAATGGTCT-CGCACAGG 126315
| ||| |||||| ||||| ||||| || ||||| | ||| ||||| ||| |||
Sbjct 240030 GTTCACGTTGTTG-CTCCCGACAAAATCTTGCGCGAGGCCGACGATGGTGGACGCG-AGG 239973
Query 126316 TTCTGCTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACC 126375
| ||||||||| | ||| ||| ||||| | |||||||| |||||||||||
Sbjct 239972 CTGGCCTCGCCGTGGTGGTACGCGGAGTGCTCAGAGACGTAGCCCGAGAGCTGCGCAACT 239913
Query 126376 TTGAT 126380
|||||
Sbjct 239912 TTGAT 239908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611391854794400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |