Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_008296.2
Length=177300
Score E
Sequences producing significant alignments: (Bits) Value
seq19 856 0.0
>seq19
Length=72585
Score = 856 bits (948), Expect = 0.0
Identities = 777/976 (80%), Gaps = 2/976 (0%)
Strand=Plus/Plus
Query 166062 ATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACTGATGATTCC 166121
|||| |||| || || | ||||||||||| | |||||||| || | | ||||| ||
Sbjct 10183 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 10242
Query 166122 AACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCACCTCCTGTCG 166180
||| | | |||||| | || || |||||||| || || | || || |||||||| |
Sbjct 10243 TACTTTACTTACAGCAA-CTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAG 10301
Query 166181 ATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCT 166240
|||||||||| ||||||||||| ||| | || || || ||||| || |||||||||||||
Sbjct 10302 ATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 10361
Query 166241 CTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAG 166300
|||||||||| |||| | || ||||| || || ||||||||||| || ||||||||||
Sbjct 10362 CTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 10421
Query 166301 CAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAGTCTTCCACT 166360
|||| || |||||||| |||||||| ||||||||||||| |||||| | || | ||||
Sbjct 10422 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 10481
Query 166361 TCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTA 166420
|| ||||||| || | | | |||||||||||||| ||||| | |||| ||| | || |
Sbjct 10482 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 10541
Query 166421 TGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCC 166480
|||||||||||||| ||||| |||||||| ||||| ||||||||| | || || |||
Sbjct 10542 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601
Query 166481 TGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCA 166540
| || || || ||||||| |||||||||||||| | |||||| || ||||| ||| |
Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661
Query 166541 CCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATA 166600
| ||||||| |||| | || ||||| || |||||||||||||| |||||||| ||||| |
Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721
Query 166601 TGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTCTCG 166660
|||| ||||| || |||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781
Query 166661 TTACTTCCTCGCTCGTCCGTGAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGT 166720
| ||||| || ||| |||||||||| ||||| | |||||| |||| || |||||||
Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 10841
Query 166721 TTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGA 166780
| || |||||||||||||| ||||||||||| ||||| || ||||||||||| || || |
Sbjct 10842 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 10901
Query 166781 TCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGC 166840
|||||||||||||||| ||||||||||| || || || ||||||||||||||| ||||
Sbjct 10902 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 10961
Query 166841 CTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACG 166900
| || | || |||||||| || ||| | ||| || || ||||| |||||||| ||||
Sbjct 10962 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 11021
Query 166901 GTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAG 166960
| ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| |
Sbjct 11022 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 11081
Query 166961 ATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACT 167020
|| || | ||||||||| || |||||||||||||||||||||||||| ||||||||||
Sbjct 11082 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 11141
Query 167021 TCCCTCTGGATCTTGC 167036
|||| || || |||||
Sbjct 11142 TCCCACTTGACCTTGC 11157
Score = 856 bits (948), Expect = 0.0
Identities = 777/976 (80%), Gaps = 2/976 (0%)
Strand=Plus/Minus
Query 166062 ATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACTGATGATTCC 166121
|||| |||| || || | ||||||||||| | |||||||| || | | ||||| ||
Sbjct 36960 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 36901
Query 166122 AACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCACCTCCTGTCG 166180
||| | | ||||||| || || |||||||| || || | || || |||||||| |
Sbjct 36900 TACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAG 36842
Query 166181 ATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCT 166240
|||||||||| ||||||||||| ||| | || || || ||||| || |||||||||||||
Sbjct 36841 ATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 36782
Query 166241 CTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAG 166300
|||||||||| |||| | || ||||| || || ||||||||||| || ||||||||||
Sbjct 36781 CTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 36722
Query 166301 CAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAGTCTTCCACT 166360
|||| || |||||||| |||||||| ||||||||||||| |||||| | || | ||||
Sbjct 36721 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 36662
Query 166361 TCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTA 166420
|| ||||||| || | | | |||||||||||||| ||||| | |||| ||| | || |
Sbjct 36661 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 36602
Query 166421 TGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCC 166480
|||||||||||||| ||||| |||||||| ||||| ||||||||| | || || |||
Sbjct 36601 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542
Query 166481 TGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCA 166540
| || || || ||||||| |||||||||||||| | |||||| || ||||| ||| |
Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482
Query 166541 CCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATA 166600
| ||||||| |||| | || ||||| || |||||||||||||| |||||||| ||||| |
Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422
Query 166601 TGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTCTCG 166660
|||| ||||| || |||||||||||||| ||||||||||| ||||||||||| ||||
Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362
Query 166661 TTACTTCCTCGCTCGTCCGTGAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGT 166720
| ||||| || ||| |||||||||| ||||| | |||||| |||| || |||||||
Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 36302
Query 166721 TTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGA 166780
| || |||||||||||||| ||||||||||| ||||| || ||||||||||| || || |
Sbjct 36301 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 36242
Query 166781 TCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGC 166840
|||||||||||||||| ||||||||||| || || || ||||||||||||||| ||||
Sbjct 36241 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 36182
Query 166841 CTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACG 166900
| || | || |||||||| || ||| | ||| || || ||||| |||||||| ||||
Sbjct 36181 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 36122
Query 166901 GTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAG 166960
| ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| |
Sbjct 36121 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 36062
Query 166961 ATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACT 167020
|| || | ||||||||| || |||||||||||||||||||||||||| ||||||||||
Sbjct 36061 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 36002
Query 167021 TCCCTCTGGATCTTGC 167036
|||| || || |||||
Sbjct 36001 TCCCACTTGACCTTGC 35986
Score = 556 bits (616), Expect = 1e-153
Identities = 737/1020 (72%), Gaps = 2/1020 (0%)
Strand=Plus/Plus
Query 167294 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGG 167353
|| |||||||| | | || ||||||||||| || || || || || || || || |||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 167354 TCTGGATTACTTCTTTTTCCCAC-TGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCAC 167412
|| ||| | || || |||||| ||| || | ||| ||||||| ||| ||||||| ||
Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 167413 GACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACCTTGAGGGTGCTAA 167472
|| || || || ||||| || ||||| || || | ||||||||||| |||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 167473 TTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACT 167532
|| || || | ||||| ||||| || || || ||||| ||| || |||||||| ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 167533 TTGGGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGC 167592
|||||| || || | || || || |||| | ||||| |||||||| ||| | ||| |
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 167593 TTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGAT 167652
|| || || || ||||| || || | | || ||||||||||| || |||||||| ||
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 167653 AAGTAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGT 167712
| |||| || ||||| ||||| |||||||| || || | || || |||||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 167713 CTTTGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTC 167772
||||| ||||| || || || || || || ||||| || | |||||||||||||| ||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 167773 GTTTGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGAC 167832
|||||||| || | || || | ||| | || ||| | || || ||||| ||||||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527
Query 167833 GCTCAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGC 167892
|| ||||| ||||| ||||||||||| |||||| | || || | ||| | |||| |||
Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587
Query 167893 AATCCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTTT 167952
|| || || | || |||||||| || || | ||||||||||| ||||||||||
Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647
Query 167953 CAAAGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGATT 168012
| |||||| | | ||||| | || || ||||| || ||||| || || ||||| ||
Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707
Query 168013 CTGGTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCT 168072
|||||| || ||||| ||| | |||||| || ||||||||| | ||||||||||||||
Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767
Query 168073 TTTCGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTAA 168132
|||||| ||||| | || | |||| | ||||| | | || | ||||||||
Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827
Query 168133 TCTTCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTGA 168192
|| ||||| || ||||| || || || || | | ||||| || ||||| ||||||||
Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887
Query 168193 AACTTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGT 168252
||| ||||| || || || || || || || ||||| | ||||| |||||||| |
Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947
Query 168253 AGACCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 168312
||| || || ||||||||| |||||||||| || || ||| | ||| | || ||||||||
Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 567231865282400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |