Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq5 154 1e-32
>seq5
Length=1518631
Score = 154 bits (170), Expect = 1e-32
Identities = 322/477 (68%), Gaps = 2/477 (0%)
Strand=Plus/Plus
Query 20270 AGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATAC 20329
||||| ||||| || ||||| || || || || | |||||||| | ||||||||| |||
Sbjct 815443 AGGGAGTAGCTCGCGATGTTGAAGGGCACACCGAGGCCCATGTCGCACGACCTCTGGTAC 815502
Query 20330 AGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGA 20389
| ||| || || | |||||||| || || ||||| || || |||| ||| || || ||
Sbjct 815503 ATCTGGCACGATAACTCACCGTTTGCGACGTAAAACTGGCAGAACATGTGGCACGGGGGC 815562
Query 20390 AGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGC 20449
|| |||||| | | |||| ||||||||||| | | ||| | || ||||
Sbjct 815563 AGGGCCATCTCCTTGAGCGCCGCGGGGTTCCACGCGGTGAGCAGGATACGCCTGTCGTTG 815622
Query 20450 GGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAG 20509
|| || || || || || | | | || | ||||| | ||||| || ||||||
Sbjct 815623 GGGTTGTTCTTGATCTTGTCGATCACCTCCGCGAGCTGGTCCACTCCCTGACCGGTATAG 815682
Query 20510 TCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGT 20569
|| || | | |||| |||| | || || ||||| | ||||||||| ||||| || ||
Sbjct 815683 TCGGCGTGCATGTCCTTGTACTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGC 815742
Query 20570 CCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCA 20629
|| | || |||||| ||||| |||||||| | | | ||| |||| | | ||
Sbjct 815743 CCGAGGTCACCCTCCTCCCTGTGACCCAGGCCGACGCTGTCGAGGTACTCGCGGCTTCCG 815802
Query 20630 TTTTTGTCCCATATCTTGA-CTCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTT 20688
|| |||||| || | | |||| || || || ||| ||| | || | |||||
Sbjct 815803 TTACCGTCCCAAATGTGAATGTCCTTGTCCTG-GAGTTCCTTGGCGCTGGTGCAGCCCTT 815861
Query 20689 CAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAG 20745
| ||||| | ||||| | | | ||||| | ||| || || ||||| ||||| ||
Sbjct 815862 GACGAACCAGATGAGCTCCTCCGCGACGCCCCTCCAGAAGACACGCTTGGTGGTGAG 815918
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372695173960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |