Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq5 154 1e-32 >seq5 Length=1518631 Score = 154 bits (170), Expect = 1e-32 Identities = 322/477 (68%), Gaps = 2/477 (0%) Strand=Plus/Plus Query 20270 AGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATAC 20329 ||||| ||||| || ||||| || || || || | |||||||| | ||||||||| ||| Sbjct 815443 AGGGAGTAGCTCGCGATGTTGAAGGGCACACCGAGGCCCATGTCGCACGACCTCTGGTAC 815502 Query 20330 AGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGA 20389 | ||| || || | |||||||| || || ||||| || || |||| ||| || || || Sbjct 815503 ATCTGGCACGATAACTCACCGTTTGCGACGTAAAACTGGCAGAACATGTGGCACGGGGGC 815562 Query 20390 AGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGC 20449 || |||||| | | |||| ||||||||||| | | ||| | || |||| Sbjct 815563 AGGGCCATCTCCTTGAGCGCCGCGGGGTTCCACGCGGTGAGCAGGATACGCCTGTCGTTG 815622 Query 20450 GGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAG 20509 || || || || || || | | | || | ||||| | ||||| || |||||| Sbjct 815623 GGGTTGTTCTTGATCTTGTCGATCACCTCCGCGAGCTGGTCCACTCCCTGACCGGTATAG 815682 Query 20510 TCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGT 20569 || || | | |||| |||| | || || ||||| | ||||||||| ||||| || || Sbjct 815683 TCGGCGTGCATGTCCTTGTACTCGGCGCCGAAGTGGCGCCACTGGAAGCCGTACACCGGC 815742 Query 20570 CCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCA 20629 || | || |||||| ||||| |||||||| | | | ||| |||| | | || Sbjct 815743 CCGAGGTCACCCTCCTCCCTGTGACCCAGGCCGACGCTGTCGAGGTACTCGCGGCTTCCG 815802 Query 20630 TTTTTGTCCCATATCTTGA-CTCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTT 20688 || |||||| || | | |||| || || || ||| ||| | || | ||||| Sbjct 815803 TTACCGTCCCAAATGTGAATGTCCTTGTCCTG-GAGTTCCTTGGCGCTGGTGCAGCCCTT 815861 Query 20689 CAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAG 20745 | ||||| | ||||| | | | ||||| | ||| || || ||||| ||||| || Sbjct 815862 GACGAACCAGATGAGCTCCTCCGCGACGCCCCTCCAGAAGACACGCTTGGTGGTGAG 815918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372695173960