Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq6 95.1 1e-14
seq1 89.7 4e-13
>seq6
Length=1431126
Score = 95.1 bits (104), Expect = 1e-14
Identities = 193/279 (69%), Gaps = 11/279 (4%)
Strand=Plus/Plus
Query 37826 CACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCA 37885
|||| |||| |||| |||||||||| || | |||| || | ||| | |||||
Sbjct 799408 CACG-ACGAGCTCT---GGAACGCGGCGCAGAAGGAGCTGACGCACCTGGGCACCATGCA 799463
Query 37886 TCAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTC---A 37942
|| |||||||||| ||| |||||| || |||| ||| | | || | | |
Sbjct 799464 CGGGTTCCTGCGCATGTACTGGGCCAAGAAGATCCTGGAGTGGACCGGCGAGGGACCGGA 799523
Query 37943 GACCGCGCT-CAACTACGCCATTTATCTCAATGATAAGTA-CAGCTTGGACGGGCGTGAT 38000
| ||||| | || || ||||||||||| || | ||| |||| ||||||| || |||
Sbjct 799524 GGAGGCGCTGCGACGG-GCGATTTATCTCAACGACAGGTACCAGC-TGGACGGTCGCGAT 799581
Query 38001 CCCAACGGTTACGTCGGCTGTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGC 38060
|| || ||||||||||| || ||||| | || |||||| | ||||| | ||||
Sbjct 799582 CCGAATGGTTACGTCGGGTGCATGTGGGCCATCTGCGGGGTTCACGACCAGGGCTGGAAA 799641
Query 38061 GAGATTCCCATTTACGGCAAGATTCGGTACATGAACTAC 38099
||| | | | ||| ||| |||||||||||||||||
Sbjct 799642 GAGCGCGACGTGTTCGGAAAGGTTCGGTACATGAACTAC 799680
>seq1
Length=2053059
Score = 89.7 bits (98), Expect = 4e-13
Identities = 226/339 (67%), Gaps = 6/339 (2%)
Strand=Plus/Plus
Query 37790 ATACGTTTATTCGCTTAAGGTGTTTGAAAACGCCGACACGCACGATCTCTTGTGGAACGC 37849
|||| | |||||||| || |||||||| | || || || ||| | ||||||||
Sbjct 927561 ATACCTGTATTCGCTGCAGCAATTTGAAAATGGAGAGACTCATGATGATCTATGGAACGC 927620
Query 37850 GGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCATGTATTGGTG 37909
|| || | | | |||| || || |||||||| | ||||||||||||||||
Sbjct 927621 AGCACAGTTGGAAATGGTGCACGGCGGCAAGATGCACGGTTTTATGCGCATGTATTGGGC 927680
Query 37910 CAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC--GCGCTCAACTACGCCATTTAT 37967
||||| || |||||||| | || || |||| | || ||| | | ||||||| ||
Sbjct 927681 AAAGAAGATCATGGAATGGACAGA--ATCTCCAGATCAAGCTCTCGAGTTCGCCATTCAT 927738
Query 37968 CTCAATGATAAGTA-CAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCTGTTTGTG 38026
||||| || || || |||| |||| || ||||| || || || || || || ||||
Sbjct 927739 CTCAACGACAAATATCAGC-TGGATGGTCGTGACCCTTCAGGATATGTGGGTTGCATGTG 927797
Query 38027 GTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTCCCATTTACGGCAAGATTCG 38086
||| || || | || || || |||| ||| || || | || ||||| ||
Sbjct 927798 GTCGATCGTGGGAGTCCATGACCAAGGCTGGTCAGAGCGCCCAATATTTGGAAAGATACG 927857
Query 38087 GTACATGAACTACAACGGATGTGTTAGGAAGTTTAATGT 38125
|| ||| |||| ||||| || | ||||| || ||
Sbjct 927858 TTATATGGCTTACAGTGGATGCGTAAAAAAGTTCAAGGT 927896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397062308055238
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |