Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 356 2e-93 >seq1 Length=2053059 Score = 356 bits (394), Expect = 2e-93 Identities = 646/932 (69%), Gaps = 25/932 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||||||||||| | || ||| ||||||||| |||||||||||| | || |||| | Sbjct 2014223 TACGATTACTTCGGCTACAAGACTCTGGAGCGATCGTACCTCCTCCGCGTCGACGGCAAG 2014282 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 | ||||| || || || ||||| ||||||||||||||||| || ||| | || Sbjct 2014283 ATCGTGGAGCGCCCCCAGCACCTGCTCATGCGCGTCGCCATCGGCATCCACA---AGGAT 2014339 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGT--AT-ACCATGGCC 93894 || ||| | | | | | |||||| | || | | || ||| || Sbjct 2014340 GTGGAGAAGGCCATCGACACCTACC---ACATGCTCTCCGAGCGCTGGATGACCCACGCG 2014396 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 |||| || || |||||| |||| ||||| || ||| |||| ||||||||||| || Sbjct 2014397 TCCCCCACGCTCTTCAACTCGGGTACCCCCCGCCCCCAGCTGTCGTCGTGTTTCCTCATC 2014456 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 | | |||| || |||||| || || | ||| | ||||||||| || ||| |||| Sbjct 2014457 GCCATGAAGGAGGATTCCATCGAGGGCATCTACGATACCCTCAAGGAGTGCGCGTGCATC 2014516 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGT--GTCCACGACGTACGTGCCAGGGGTTCCT 94072 || || | ||| || || ||||| || || |||||||| | || |||| ||||| Sbjct 2014517 TCCAAGTCCGCCGGCGGCATCGG--TCTGTCCATCCACGACATCCGCGCCACCTCTTCCT 2014574 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||||||||| ||||| || |||||||||||| || |||| ||||| || ||||| ||| Sbjct 2014575 ACATCCGCGGCACCAACGGAACCTCCAACGGCATCATCCCCATGCTTCGCGTCTTTAACG 2014634 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | ||| | ||||| |||||||| || || | |||||| || | ||||| |||| | Sbjct 2014635 ACACCGCGAGGTACGTCGACCAGGGCGGCGGCAAGAGGAAAGGCGCATTCGCCATCTACC 2014694 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 ||||||| |||||||||||| | | | ||||||| || |||||||||||||| | Sbjct 2014695 TCGAGCCGTGGCACGCGGACATCTTCGACTGGCTCGACCTCCGCAAGAACCACGGCAAGG 2014754 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCA--GACCTTTTTATGAA 94310 | || | | ||||| ||||| ||||||| || ||| ||| || || || ||||| Sbjct 2014755 AGGAGGCGCGTGCCAGGGACCTGTTCTACGGCCTGTGG--ACCAACGATCTGTTCATGAA 2014812 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 ||||||||| ||| || |||| || || || ||||| ||| | ||||| ||| Sbjct 2014813 GCGCGTCGAGGCTAACGGCGAGTGGACCCTCTTCTGCCCCAACGAA-GCCCCGG---GTC 2014868 Query 94371 -CGACGTTTG-TGGATCGCG--TTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCA 94426 || | ||| ||| || | || || | |||| | ||||| || |||||| Sbjct 2014869 TCGCGGATTGCTGGGGCGAGGAGTTCGAGGCTCTGTACGAAAAGTACGAGGCGGAGGGCA 2014928 Query 94427 AGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 ||| | |||| | | || | |||| ||| ||| | || ||||| | Sbjct 2014929 AGGGTAAGAAGACGGTCAAGGCCCAGCAGCTCTGGTTCGCCATCCTCGAGTCCCAGGTTG 2014988 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 |||| |||| || ||||| | |||||||| | |||| |||||||||||||||| Sbjct 2014989 AGACTGGTAACCCGTACATGCTCTTCAAGGATGCGTGCAACCGCAAGTCCAACCAGCAGA 2015048 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 ||||||| ||| ||| || || |||||||||||||||||||| || || |||| Sbjct 2015049 ACCTCGGCACCATCCGATCCTCCAACCTCTGCACCGAGATTGTCGAGTACACCTCGCCGG 2015108 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATC 94638 | |||| || ||||| ||||| | |||||| Sbjct 2015109 AGGAGACCGCGGTGTGCAACCTCGCGTCCATC 2015140 Score = 174 bits (192), Expect = 2e-38 Identities = 238/331 (72%), Gaps = 5/331 (2%) Strand=Plus/Plus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | ||||| ||||| ||||||||||| || |||||| | ||||| | ||||||||| Sbjct 2015651 AACTCCCTGCTGGTGGCGCCCATGCCCACCGCGTCCACGTCCCAGATTTTGGGCAACAAC 2015710 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||| || | |||||||||| | ||| | | || |||||| |||| || ||| Sbjct 2015711 GAGTGCTTCGAGCCGTACACCTCCAACATCTACGCCCGCCGCGTGCTCTCCGGCGAGTTC 2015770 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAG 95268 ||||| | ||| |||||||||| ||||| || |||| | |||| || Sbjct 2015771 ACCGTCGTGAACCAGCACCTCCTCTCCGACCTCACCGAGATGGGCCTCTGGGACCCCAGC 2015830 Query 95269 GTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATC-CCGCAAATACCGGA 95327 |||||||| | || | | |||||||||||||||| || | | | || || || Sbjct 2015831 CTCAAGAACGAGCTCATCGCCAACAACGGCTCCGTCCAG----TCGCTGGACATCCCCGA 2015886 Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCA 95387 || |||||| | |||||||||| || ||||||||| ||||||| | | | ||| Sbjct 2015887 CAACCTCAAGGAGATCTACAAGACGGTCTGGGAGATCAAGCAGCGCATCCTCGTGGACAT 2015946 Query 95388 CGCGGCCGCCCGCGGGCCCTTCATCTGCCAG 95418 || |||| |||||| |||||||| |||| Sbjct 2015947 GGCCGCCGACCGCGGCGCCTTCATCGACCAG 2015977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723082503240