Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1 199 5e-46
seq13 140 4e-28
seq7 138 1e-27
seq14 136 5e-27
>seq1
Length=2053059
Score = 199 bits (220), Expect = 5e-46
Identities = 557/850 (66%), Gaps = 10/850 (1%)
Strand=Plus/Minus
Query 110280 GGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAA 110339
||| || || || ||||| || |||||||| | ||||| || |||||| || |
Sbjct 2015149 GGGCAGCGCGATGGACGCGAGGTTGCACACCGCGGTCTCCTCCGGCGAGGTGTACTCGAC 2015090
Query 110340 AATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGA 110399
||| || || || | |||||| ||| || | ||||| ||| || || |||
Sbjct 2015089 AATCTCGGTGCAGAGGTTGGAGGATCGGATGGTGCCGAGGTTCTGCTGGTTGGACTTGCG 2015030
Query 110400 GTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAAT 110459
|||||| |||||||| |||||||||| ||| ||||||| || ||| |||| ||| ||
Sbjct 2015029 GTTGCACGCATCCTTGAAGAGCATGTACGGGTTACCAGTCTCAACCTGGGACTCGAGGAT 2014970
Query 110460 GGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519
||| ||| | | ||| ||| || ||| | || ||| ||||||||||
Sbjct 2014969 GGCGAACCAGAGCTGCTGGGCCTTGACCGTCTTCTTACCCTTGCCCTCCGCCTCGTACTT 2014910
Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579
||||| |||| || |||| || | ||| | |||||| || | || |||
Sbjct 2014909 TTCGTACAGAGCCTCGAACTCCTCGCCCCAGCAATCCGCGAGACCCGGGGCTTCGTTGGG 2014850
Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639
|||||||||| ||| | || |||| || | |||||||||||| || ||||
Sbjct 2014849 GCAGAAGAGGGTCCACTCGCCGTTAGCCTCGACGCGCTTCATGAACAGATCGTTGGTCCA 2014790
Query 110640 CATCGCCG-AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCT 110698
|| |||| |||| ||||| | | ||| ||||| || | || ||||| ||| || |
Sbjct 2014789 CA-GGCCGTAGAACAGGTCCCTGGCACGCGCCTCCTCCTTGCCGTGGTTCTTGCGGAGGT 2014731
Query 110699 CCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTAC 110758
| | |||| | ||| |||| |||||| || ||||| |||| |||| | || || |
Sbjct 2014730 CGAGCCAGTCGAAGATGTCCGCGTGCCACGGCTCGAGGTAGATGGCGAATGCGCCTTTCC 2014671
Query 110759 ----GACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814
| || || |||||| || || | || ||| | || ||||| | ||||| ||
Sbjct 2014670 TCTTGCCG-CCGCCCTGGTCGACGTACCTCGCGGTGTCGTTAAAGACGCGAAGCATGGGG 2014612
Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCG 110874
|| || || | ||| || || || || | || ||| |||| || ||||||
Sbjct 2014611 ATGATGCCGTTGGAGGTTCCGTTGGTGCCGCGGATGTAGGAAGAGGTGGCGCGGATGTCG 2014552
Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTA 110934
||||| || ||| || || || || |||| || || ||||| |||| |||
Sbjct 2014551 TGGATGGACAGACCGATGCCGCCGGCGGACTTGGAGATGCACGCGCACTCCTTGAGGGTA 2014492
Query 110935 CCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGA 110994
| || || || || || ||||| |||| |||| || || || || || |||| |||
Sbjct 2014491 TCGTAGATGCCCTCGATGGAATCCTCCTTCATGGCGATGAGGAAACACGACGACAGCTGG 2014432
Query 110995 GGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGAC 111054
|| || || || |||| |||||||| || || | ||| || | | | | | |||
Sbjct 2014431 GGGCGGGGGGTACCCGAGTTGAAGAGCGTGGGGGACGCGTGGGTCATCCAGCGCTCGGAG 2014372
Query 111055 ATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACT 111114
| | ||| ||| ||||||| || ||||| || ||| || || ||||| ||
Sbjct 2014371 AGCATGTGGTAGGTGTCGATGGCCTTCTCCACATCCTT---GTGGATGCCGATGGCGACG 2014315
Query 111115 CGCATGAACA 111124
||||||| ||
Sbjct 2014314 CGCATGAGCA 2014305
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 110072 AGTCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAA 110131
|||||||||| | || || || || || || || || |||||||| ||||| ||||
Sbjct 2015420 AGTCGAAGGGCATGCCGAGGAGGATGAAGACGTCGGCGAGGCCCTGAACGCCGAGGCCAA 2015361
Query 110132 TGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGA 110191
|||| | ||||||||||| ||| | || || || |||||||| ||||| |||||
Sbjct 2015360 TGGGCCTGTGCTTCATGTTGCTGCGCCTGGCGGTCTCGACGGGGTAGTAGTTGACGTCGA 2015301
Query 110192 TGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGA 110251
||| || ||||| || ||||| | ||||| || ||| ||||||| ||||
Sbjct 2015300 TGATGCGGTTGAGGTTGCGGGTCACCTTGCGGGTGATCTCGGCGAGCTTGTCGTGGTCGA 2015241
Query 110252 A 110252
|
Sbjct 2015240 A 2015240
>seq13
Length=1011177
Score = 140 bits (154), Expect = 4e-28
Identities = 317/466 (68%), Gaps = 17/466 (4%)
Strand=Plus/Minus
Query 11497 ATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTT 11556
|||| | |||||| ||||| |||||||| || || || || ||||| |||||
Sbjct 363044 ATCTGCCTATCGAACCGACCAGGGCGGAGCAGCGCGCGGTCGAGGATATCCGGTCGGTTG 362985
Query 11557 GTAGCGGCAATGACTACAATGCCAGTCTCATTGT---CGAAACCGTCCATTTCTGTGAGA 11613
|| | || | || || | ||| ||| ||| ||||||||||||| || |||
Sbjct 362984 GTGCCCGCGAGCACCACCACGCC---CTCCTTGCTCCCGAAACCGTCCATCTCCACGAGG 362928
Query 11614 AGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCG----AACG 11669
|||||||| | ||| | ||| | ||| ||||| | ||| | || |||| ||
Sbjct 362927 AGCTGGTTCAGCGTGTTTTCCCTCTCGTCGTTCCCGCCCAT-CATCCCGCCGCGCCCGCG 362869
Query 11670 CTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGT-G 11728
|| ||||| ||||||||||| |||||||| | ||| | ||| | |||| | | |
Sbjct 362868 CTGGCGACCGATGGCGTCAATCTCGTCGATGAAGATGATGCTCGG-CGCCTGGCTCCTGG 362810
Query 11729 CCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGT 11788
||||| |||| || || || || || ||| || || || ||||||||||| | |||||
Sbjct 362809 CCTGTGCGAAGAGATCGCGGACGCGGCTCGGGCCCACGCCCACGAACATCTCCATGAAGT 362750
Query 11789 TTGCGGCAGAACACTGA-ATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGG 11847
| | ||| | | || | || ||||| |||||| || || | || ||||||
Sbjct 362749 CAGAGCCAG-ATATGGACAGAAACGGAACCCCAGACTCGCCCGCCGTAGCCTTGGCGAGG 362691
Query 11848 AGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC- 11906
|| ||||| ||||| || || | || | || || ||||| || |||||||| || ||
Sbjct 362690 AGCGTCTTGCCCGTCCCCGGGGGGCCGACCAGCAGCGCGCCTCGAGGGATCTTCGCGCCG 362631
Query 11907 ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952
| ||| ||| || |||||||||||||| || |||| ||||
Sbjct 362630 AGGTCC-TCGTATTTCTTGGGCTTCTTGAGGAAATCGACAAACTCC 362586
>seq7
Length=1394110
Score = 138 bits (152), Expect = 1e-27
Identities = 275/397 (69%), Gaps = 14/397 (4%)
Strand=Plus/Minus
Query 11583 CTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATC 11642
||| | |||||||||||||| || ||||| |||||||||| |||||| || ||||| ||
Sbjct 536802 CTCGTCGTCGAAACCGTCCAGCTCGGTGAGCAGCTGGTTGAGCGTCTGCTCGCGCTCGTC 536743
Query 11643 GTTGG--AGG----GCATACCACCTGCCGAACGCTTC--TTACCGACAGCGTCAATCTCA 11694
||| | | ||| || || | || | || | || |||| ||||| |||||
Sbjct 536742 GTTCCCCATGCCCCGCAGACGCCC-GTCGCTC-CTGCCCTTGGCGACGGCGTCGATCTCG 536685
Query 11695 TCGATGAATACGATACACGGTTGGTTGGCACGTGCCT-GTTCGAAAAGTTCACGTACACG 11753
|||||||| ||||| | ||| | || | || | | |||| | || | || ||
Sbjct 536684 TCGATGAACACGAT-CGCGGGCGCCTGCTCCCTGGCGCGCGCGAACACGTCCCTGACGCG 536626
Query 11754 CTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA-ACACTGAATGAAGG 11812
||| || | || | | ||| ||| || || | | || || || |||| ||||||
Sbjct 536625 AGCCGCGCCCATGCCCATGTACAGCTCCACAAACTCGGAAGCCGAGACGCTGA-TGAAGG 536567
Query 11813 GAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCAC 11872
|||| || ||| || |||| ||| | ||||| | |||||| || || || || || |
Sbjct 536566 GAACGCCAGCCTCGCCCGCGACGGCCCTGGCGAGCAAAGTCTTGCCGGTGCCGGGCGCGC 536507
Query 11873 CAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCT 11932
| |||| ||| |||| | |||| | |||| || | |||| |||| ||| |||
Sbjct 536506 CCACGAGCAGGACGCCGCAGGGGGGCCTGGCGCCGAGCCTGGTGTAGTGCTCGGGCCTCT 536447
Query 11933 TGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969
|||||| ||| |||||||||| |||||||||||||||
Sbjct 536446 TGAGGATGTCGACAATCTCCTGAAGTTCCTCCTTGGC 536410
Score = 105 bits (116), Expect = 8e-18
Identities = 171/243 (70%), Gaps = 5/243 (2%)
Strand=Plus/Minus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || || || |||| ||||||||||| || |||| || || ||||||| ||
Sbjct 900434 TGGAGGCCCTCGTCCCTGGAGATGAGCTCGTTGGAGAAGGTGAGCCCGCGCATGAGCCCG 900375
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| ||||| ||||| ||||| || ||||| ||| || ||||||||||||||||| ||
Sbjct 900374 CGCTTCTTGAGCCAGAAGATTGCGCAAAACGATCCGGAGAAGAAGATGCCCTCCACGCAC 900315
Query 119628 GCGAAAGCGAATAGACGCTCAGC--AAAAGGTCGAGACTTGTCGAACCACTTGAGAGCCC 119685
||||| || | || ||||| || || | |||| || || ||||||||| ||||
Sbjct 900314 GCGAACGCCACCAGTCGCTCGGCGAAACACTCCGAGGACTG--GATCCACTTGAGGGCCC 900257
Query 119686 AGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTT-T 119744
| | ||||| ||| | | ||| || | || ||||| ||| || ||| |||| |
Sbjct 900256 ACTGCGCCTTGCGCGCCACCGTGGGCACGTTGTGAATGGCCCTGAACAGGTGCCTCTTCT 900197
Query 119745 TCA 119747
|||
Sbjct 900196 TCA 900194
>seq14
Length=832468
Score = 136 bits (150), Expect = 5e-27
Identities = 329/493 (67%), Gaps = 10/493 (2%)
Strand=Plus/Minus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|| ||||| || || |||||||| || || || || | ||| | ||| || ||
Sbjct 528330 CGGTCGAAGCGGCCGGGGCGGAGCAGCGCCGAGTCGAGGACATCCGGCCTGTTCGTCGCC 528271
Query 11563 GCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGTTG 11622
|| | ||| | | ||| || | ||||| |||||||| || || || |||||||||
Sbjct 528270 GCGAGGACGATGACGCCGGTGTTGCCCTCGAAGCCGTCCATCTCCGTCAGCAGCTGGTTG 528211
Query 11623 ATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAA----CGCTTCTTACC 11678
|||||||| || ||||| ||||| | || ||| ||||| | |||| |||
Sbjct 528210 ATCGTCTGCTCGCGCTCGTCGTT--ACCGCCGCCCA--TGCCGGACCCGCGCTGGCGACC 528155
Query 11679 GACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAA 11738
||| ||||| ||||| |||||||| ||||| ||||| |||| |||| ||||||
Sbjct 528154 GACGGCGTCGATCTCGTCGATGAAGACGATGCACGGAGCTTTGGATTTGGCCTTTTCGAA 528095
Query 11739 AAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGA 11798
|| || || || ||| ||| || || || ||||| | ||| || || | | || |
Sbjct 528094 GAGATCGCGAACGCGCGACGCGCCGACGCCGACGAAGAGCTCGACAAACTCGGACGCGGC 528035
Query 11799 ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACC 11858
|| | ||| || || | ||| || |||| || ||||| | |||||||||
Sbjct 528034 GCAGGAGAAGAACGGGACGCCCGCCTCGCCCGCGACAGCCTTGGCGAGCAAAGTCTTACC 527975
Query 11859 CGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-ACTTCCAAAGT 11917
|| || || | ||| |||| ||| || |||||||||||| || | | | ||
Sbjct 527974 GGTGCCGGGGGGACCGACGAGGAGGCACCCCTTGGGGATCTTGGCTCCGAGCTGC-GTGT 527916
Query 11918 AGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGA 11977
| || || |||||||| ||||| |||| ||||| || || ||||||| |||||
Sbjct 527915 ACTTGTCGGGATTCTTGAGAAAGTCGACAACCTCCTGGAGCTCGAGCTTGGCGCCGTCGA 527856
Query 11978 TACCCTCAACATC 11990
||| | || ||
Sbjct 527855 CGCCCGCGACGTC 527843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975860118200
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