Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_015279.1
Length=190789
Score E
Sequences producing significant alignments: (Bits) Value
seq19 820 0.0
>seq19
Length=72585
Score = 820 bits (908), Expect = 0.0
Identities = 776/983 (79%), Gaps = 8/983 (1%)
Strand=Plus/Plus
Query 179757 TGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTTCTGATGATTCCA 179816
||| | || || || | ||||| || || ||||||||||||| || | ||||| ||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 179817 ACTCTGTTGGCAGCAACTATCTG-CTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGA 179875
||| | | |||||||| || | |||||||| || || || |||||||| ||||| ||
Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 179876 CATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 179935
|||||||| |||||||| || || |||| ||||| ||||| || ||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 179936 TGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 179995
|||||| || | ||| | || ||||| || || ||||||||||| || |||||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 179996 CGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTT 180055
|| || ||||| |||||||| || ||||||||||||| ||| ||| |||| | |||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 180056 CCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTTTCTTATCGCTTGGGTAT 180115
| | || || || | | | |||||||||||||||||||| ||||||| || || || ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 180116 GCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCC 180174
||| || ||||| ||| ||||| || |||||||| || || |||||| | |||||||||
Sbjct 10543 GCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601
Query 180175 TCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCA 180234
|||| || || ||||||| ||||| |||||||| | |||||| || || |||||||| |
Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661
Query 180235 CCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACA 180294
| ||||||| |||| | || ||||| || |||||||||||||| |||||||| |||||||
Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721
Query 180295 TGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGG 180354
|||| || || || ||||| ||||| |||||||| ||||| ||||||||||||||||| |
Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781
Query 180355 TTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGT 180414
| || || || || | ||||| || ||||| | ||||| ||| || |||||||
Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 10841
Query 180415 TTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGA 180474
| || |||||||||||||| ||||||||||| |||||||| || |||||||| ||||| |
Sbjct 10842 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 10901
Query 180475 TCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGC 180534
||||||| || || || ||||||||||| |||||||| ||||||||||| ||| ||||
Sbjct 10902 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 10961
Query 180535 CTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACG 180594
| || | || ||||||||||| || |||| | || ||||| |||||||| ||||
Sbjct 10962 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 11021
Query 180595 GTTTCAACTTCAACCAGTCCATCATTGATGGTCAA--GGTCGTGTGCTCAACACTTGGGC 180652
| ||||||||||||||||| | | ||| |||| || ||||| | ||||| |||||
Sbjct 11022 GATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGGC 11079
Query 180653 AGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAA 180712
|| | | ||||| ||| || ||||||||||| |||||||||||||| ||||||||
Sbjct 11080 TGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 11139
Query 180713 CTTCCCACTTGACCTGGCAGCTG 180735
||||||||||||||| ||| |||
Sbjct 11140 CTTCCCACTTGACCTTGCATCTG 11162
Score = 820 bits (908), Expect = 0.0
Identities = 776/983 (79%), Gaps = 8/983 (1%)
Strand=Plus/Minus
Query 179757 TGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTTCTGATGATTCCA 179816
||| | || || || | ||||| || || ||||||||||||| || | ||||| ||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 179817 ACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGA 179875
||| | | |||||||| || | |||||||| || || || |||||||| ||||| ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 179876 CATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 179935
|||||||| |||||||| || || |||| ||||| ||||| || ||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 179936 TGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 179995
|||||| || | ||| | || ||||| || || ||||||||||| || |||||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 179996 CGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACTT 180055
|| || ||||| |||||||| || ||||||||||||| ||| ||| |||| | |||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 180056 CCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTTTCTTATCGCTTGGGTAT 180115
| | || || || | | | |||||||||||||||||||| ||||||| || || || ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 180116 GCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCC 180174
||| || ||||| ||| ||||| || |||||||| || || |||||| | |||||||||
Sbjct 36600 GCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542
Query 180175 TCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCCCTCGGCATTTCTGGCA 180234
|||| || || ||||||| ||||| |||||||| | |||||| || || |||||||| |
Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482
Query 180235 CCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACA 180294
| ||||||| |||| | || ||||| || |||||||||||||| |||||||| |||||||
Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422
Query 180295 TGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGG 180354
|||| || || || ||||| ||||| |||||||| ||||| ||||||||||||||||| |
Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362
Query 180355 TTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGT 180414
| || || || || | ||||| || ||||| | ||||| ||| || |||||||
Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 36302
Query 180415 TTGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGA 180474
| || |||||||||||||| ||||||||||| |||||||| || |||||||| ||||| |
Sbjct 36301 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 36242
Query 180475 TCTTCCAGTATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGC 180534
||||||| || || || ||||||||||| |||||||| ||||||||||| ||| ||||
Sbjct 36241 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 36182
Query 180535 CTGTCGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACG 180594
| || | || ||||||||||| || |||| | || ||||| |||||||| ||||
Sbjct 36181 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 36122
Query 180595 GTTTCAACTTCAACCAGTCCATCATTGATGGTCAA--GGTCGTGTGCTCAACACTTGGGC 180652
| ||||||||||||||||| | | ||| |||| || ||||| | ||||| |||||
Sbjct 36121 GATTCAACTTCAACCAGTCTGTAGTAGAT--TCAAACGGACGTGTAATTAACACATGGGC 36064
Query 180653 AGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTCACAA 180712
|| | | ||||| ||| || ||||||||||| |||||||||||||| ||||||||
Sbjct 36063 TGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 36004
Query 180713 CTTCCCACTTGACCTGGCAGCTG 180735
||||||||||||||| ||| |||
Sbjct 36003 CTTCCCACTTGACCTTGCATCTG 35981
Score = 594 bits (658), Expect = 6e-165
Identities = 744/1018 (73%), Gaps = 2/1018 (0%)
Strand=Plus/Plus
Query 181420 ATGGTTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTC 181479
||||||||||| | | || ||||||||||| || || || || || || || || |||||
Sbjct 1991 ATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGGTC 2050
Query 181480 TGGACTACTTCTTTTTCCCA-CTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTA 181538
||| | || || |||||| ||| || ||||| |||| || ||| | ||||| || |
Sbjct 2051 AGGAAT-TTTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAACAA 2109
Query 181539 CTTTTGTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGGTGCTAATT 181598
| || || || || |||||||| ||||| || || ||| ||||||||||| ||| |
Sbjct 2110 CATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAACT 2169
Query 181599 TCCTTACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTT 181658
|||||||| |||| || ||||| || || || ||||| ||| || |||||||| ||||
Sbjct 2170 TCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCTTT 2229
Query 181659 GGGGTCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTT 181718
|||| || ||||| || || || ||| || ||| || ||||| ||| | ||| | |
Sbjct 2230 GGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGACAT 2289
Query 181719 TTGTGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTG 181778
| || || || ||||| || |||| | ||||| ||||||||| | ||||||||| |||
Sbjct 2290 TCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAATTG 2349
Query 181779 CTCGTCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTAT 181838
| ||| | | ||| || || ||||| |||||||| || || | ||||| |||||||
Sbjct 2350 CACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGTAT 2409
Query 181839 TCGTCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTT 181898
| || |||||||| || || || || || |||||||| | ||||||||||| || |
Sbjct 2410 TTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTCAT 2469
Query 181899 TCGGTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGC 181958
| ||||| |||| |||||||| ||| |||| ||| |||| || || || || ||||| |
Sbjct 2470 TTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGACAC 2529
Query 181959 TCAATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAA 182018
| || || ||||| |||||||| || |||||| | || || | ||| | || | ||| |
Sbjct 2530 TTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGCGA 2589
Query 182019 TTCACGGTGTGACCGTGGAGAATACTCTGTATCAAGACGGTGACCAAGCAAATACTTTCA 182078
||||||| | || || ||||| || || | |||| ||||| |||| ||||||
Sbjct 2590 TTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTTCC 2649
Query 182079 AAGCATTCGATTCAACTCAAGAAGAAGAAACCTATTCAATGGTTACAGCGAACCGCTTCT 182138
||||| | ||||||||| ||||| || || |||||||| ||||| ||||| ||||
Sbjct 2650 GTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTTCT 2709
Query 182139 GGTCTCAGATCTTCGGTATTGCGTTTAGCAATAAGAGGTGGTTGCATTTCTTTATGCTCT 182198
|||| ||||| |||||| | || || || ||| | ||| | || ||||||||||| |
Sbjct 2710 GGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCTTT 2769
Query 182199 TTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACC 182258
| || ||||| | || | |||| | | ||| || | || | || || ||||
Sbjct 2770 TCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAACC 2829
Query 182259 TTCGTGCTTATGACTTTGTATCCCAAGAAATCAGAGCATCAGAAGACCCAGAGTTCGAGA 182318
| ||||| || ||||| ||||| ||||| ||| | ||| | ||||| || ||||| || |
Sbjct 2830 TCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGAAA 2889
Query 182319 CGTTCTACACAAAGAACATTCTCTTGAATGAAGGTCTGCGTGCATGGTTAGCACCAGTCG 182378
| |||||||| ||||| ||||| | || |||||| | ||||||||| | ||| | |
Sbjct 2890 CATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCAAG 2949
Query 182379 ATCAACCACATGAGAACTTTGTGTTCCCTGAGGAAGTATTACCCAGAGGTAACGCACT 182436
|||| || ||||| ||| |||| ||||||||||| ||| | || | || ||||| ||
Sbjct 2950 ATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610396655030760
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