Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_015281.1
Length=179563
Score E
Sequences producing significant alignments: (Bits) Value
seq19 776 0.0
>seq19
Length=72585
Score = 776 bits (860), Expect = 0.0
Identities = 761/977 (78%), Gaps = 6/977 (1%)
Strand=Plus/Plus
Query 167872 TGGGTAACATCAACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 167931
||| | || |||||| | ||||| || || ||||||||||||| ||| | ||||| ||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 167932 ACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 167990
||| | | |||||||| || || |||||||| || || | |||||||| ||||| ||
Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 167991 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 168050
||||| || |||||||| || || |||| ||||| ||||| || ||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 168051 TGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCATCTGGGAAGC 168110
|||||| || ||||| | ||||| ||||| |||||||||||||| || |||||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 168111 AGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAGTCTTTCACTT 168170
||| || || ||||||||| | || ||||||||||||| ||| || | || | ||||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 168171 CCTCATCGGTATCTATGCATACATGGGACGTGAATGGGAACTTTCATATCGTTTAGGTAT 168230
| ||||||| || | | |||||||||| ||||| ||||| ||||| | |||||||| ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 168231 GCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGCAGTATTCCT 168290
|||||| ||||| ||| || |||||||| || || || ||||| | || |||||| |
Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602
Query 168291 AGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAAC 168350
|| || || ||||||| ||| ||||||||||| |||||| || || || || |||||
Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662
Query 168351 ATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATAT 168410
||||||| |||| | || ||||| ||||||||||| || || ||||| || ||||| ||
Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722
Query 168411 GCTCGGCGTTGCTGGGGTATTTGGTGG--CAGTTTGTTTAGTGCTATGCACGGAAGTTTG 168468
||| || |||||||| ||||| ||||| || || || ||| |||||||| |
Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTT--TTCTCTGCAATGCACGGTTCACTC 10780
Query 168469 GTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAG 168528
|| ||||| |||||| | | ||||| ||||| | ||| || |||| || ||||||
Sbjct 10781 GTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAG 10840
Query 168529 TTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTG 168588
||||||||||||||||| || |||||||||||||| || || ||||||||||| ||| |
Sbjct 10841 TTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTT 10900
Query 168589 ATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGG 168648
||||||||||||||||||||||||||||| || || | ||||||||||| || |||
Sbjct 10901 ATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGG 10960
Query 168649 CCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAAC 168708
|| || | || ||||||||||| || | || | || || ||||| |||||||| |||
Sbjct 10961 CCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAAC 11020
Query 168709 GGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCA 168768
|| ||||||||||||||||| | | ||| | || ||||| | ||||| |||||
Sbjct 11021 GGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCT 11080
Query 168769 GATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 168828
||| | | ||||| ||| || ||||||||||| ||||| ||||||||||| ||||||
Sbjct 11081 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 11140
Query 168829 TTCCCACTCGATCTTGC 168845
|||||||| || |||||
Sbjct 11141 TTCCCACTTGACCTTGC 11157
Score = 776 bits (860), Expect = 0.0
Identities = 761/977 (78%), Gaps = 6/977 (1%)
Strand=Plus/Minus
Query 167872 TGGGTAACATCAACTAACAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 167931
||| | || |||||| | ||||| || || ||||||||||||| ||| | ||||| ||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 167932 ACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 167990
||| | | |||||||| || || |||||||| || || | |||||||| ||||| ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 167991 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 168050
||||| || |||||||| || || |||| ||||| ||||| || ||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 168051 TGGTGCAGTTGTCCCTTCTTCTAATGCTATTGGACTTCACTTCTATCCCATCTGGGAAGC 168110
|||||| || ||||| | ||||| ||||| |||||||||||||| || |||||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 168111 AGCATCACTCGATGAGTGGTTGTATAACGGTGGTCCTTTCCAACTAGTAGTCTTTCACTT 168170
||| || || ||||||||| | || ||||||||||||| ||| || | || | ||||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 168171 CCTCATCGGTATCTATGCATACATGGGACGTGAATGGGAACTTTCATATCGTTTAGGTAT 168230
| ||||||| || | | |||||||||| ||||| ||||| ||||| | |||||||| ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 168231 GCGTCCATGGATCTGTGTTGCATACTCTGCACCAGTCGCTGCAGCGAGTGCAGTATTCCT 168290
|||||| ||||| ||| || |||||||| || || || ||||| | || |||||| |
Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541
Query 168291 AGTGTATCCTTTCGGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAAC 168350
|| || || ||||||| ||| ||||||||||| |||||| || || || || |||||
Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481
Query 168351 ATTCAACTACATGTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATAT 168410
||||||| |||| | || ||||| ||||||||||| || || ||||| || ||||| ||
Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421
Query 168411 GCTCGGCGTTGCTGGGGTATTTGGTGG--CAGTTTGTTTAGTGCTATGCACGGAAGTTTG 168468
||| || |||||||| ||||| ||||| || ||| | ||| |||||||| |
Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTC--TGCAATGCACGGTTCACTC 36363
Query 168469 GTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAG 168528
|| ||||| |||||| | | ||||| ||||| | ||| || |||| || ||||||
Sbjct 36362 GTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAG 36303
Query 168529 TTCGGACAAGAAGAAGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTG 168588
||||||||||||||||| || |||||||||||||| || || ||||||||||| ||| |
Sbjct 36302 TTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTT 36243
Query 168589 ATCTTCCAATACGCTTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGG 168648
||||||||||||||||||||||||||||| || || | ||||||||||| || |||
Sbjct 36242 ATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGG 36183
Query 168649 CCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAAC 168708
|| || | || ||||||||||| || | || | || || ||||| |||||||| |||
Sbjct 36182 CCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAAC 36123
Query 168709 GGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCA 168768
|| ||||||||||||||||| | | ||| | || ||||| | ||||| |||||
Sbjct 36122 GGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCT 36063
Query 168769 GATGTTCTGAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAAC 168828
||| | | ||||| ||| || ||||||||||| ||||| ||||||||||| ||||||
Sbjct 36062 GATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAAC 36003
Query 168829 TTCCCACTCGATCTTGC 168845
|||||||| || |||||
Sbjct 36002 TTCCCACTTGACCTTGC 35986
Score = 563 bits (624), Expect = 1e-155
Identities = 735/1012 (73%), Gaps = 6/1012 (1%)
Strand=Plus/Plus
Query 169319 GATGACTGGCTCAAACGCGACCGCTTTGTATTCATTGGTTGGTCTGGTCTACTTCTTCTT 169378
|| |||||||| || || || || || |||||| | |||||||| || | || || ||
Sbjct 2007 GACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGGTCAGGAATT-TTATTATT 2065
Query 169379 CCCAC-TGCCTATCTTGCTATTGGAGGGTGGCTCACTGGTACAGCGTTTGTTACTTCCTG 169437
|||| ||| || |||| |||| || ||| | ||||| ||| | || || ||||| ||
Sbjct 2066 CCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAACAACATTCGTAACTTCATG 2125
Query 169438 GTACACCCACGGACTCGCT--TCCAGTTACTTAGAAGGCGCTAACTTCCTCACTGCTGCT 169495
|||||| ||||| | || | || ||| | || || ||||||||| || | ||
Sbjct 2126 GTACACACACGGTTTAGCAAGTTCA--TACCTTGAGGGATGTAACTTCCTTACATCGGCA 2183
Query 169496 GTCAGTACACCTGCTGACGCTATGGGACACTCACTGCTCTTGCTATGGGGTCCAGAAGCA 169555
|| ||||| || || ||||| |||||||| || | || ||||| |||||||||
Sbjct 2184 GTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCTTTGGGGACCAGAAGCA 2243
Query 169556 CAAGGCGATTTCGTTCGCTGGTGTCAATTGGGTGGTCTCTGGAACTTTGTAGCACTTCAT 169615
||||| || ||| || |||||||| | ||||| | |||| || |||||||||||
Sbjct 2244 CAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGACATTCGTAGCACTTCAC 2303
Query 169616 GGTGCATTTGCATTGATTGGTTTCATGCTTAGGCAGTTTGAATTGGCACGTCTTATTGGC 169675
|||||||| | ||| || || || ||||| | || |||||| | |||||| |
Sbjct 2304 GGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAATTGCACGTGCAGTACAA 2363
Query 169676 ATCCGTCCTTATAATGCTATTGCATTCTCTGGTCCTATTGCTGTATTTGTCAGTGTCTTT 169735
|| ||||| || || || ||||||||||| | ||||| ||||||||||| ||| ||
Sbjct 2364 ATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGTATTTGTATCTGTATTC 2423
Query 169736 CTTATCTACCCACTTGGACAGTCCTCATGGTTCTTTGCTCCCTCCTTTGGAGTATCAGCA 169795
||||| |||||||||||||| || |||||||||||| || || ||||| ||| | | |
Sbjct 2424 CTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTCATTTGGTGTAGCGGGA 2483
Query 169796 ATCTTCAGGTTCCTGTTGTTCCTGCAAGGATTCCACAACTGGACGTTGAATCCATTCCAC 169855
|| ||| | ||| | | ||| | ||||| |||||||||||||| | || |||||||||
Sbjct 2484 ATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGACACTTAACCCATTCCAC 2543
Query 169856 ATGATGGGTGTAGCAGGAATCTTGGGCGGAGCATTGCTTTCTGCTATCCATGGTGTTACA 169915
|||||||| ||||| || | | || | |||| | |||| ||| || || || | ||
Sbjct 2544 ATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGCGATTCACGGAGCAACT 2603
Query 169916 GTAGAGAACACATTGTATGAAGACGGTGAGCAGGCAAATACTTTCAAGGCGTTTGATTCG 169975
|||||||||||| | | ||||| ||||| |||| |||||| || ||| | |
Sbjct 2604 GTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTTCCGTGCATTTAACCCA 2663
Query 169976 ACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTC 170035
|| || | ||||||||||| || ||||| || |||||||| |||||||| ||||| |||
Sbjct 2664 ACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTTCTGGTCACAGATTTTC 2723
Query 170036 GGTATTGCGTTTTCTAACAAGCGTTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATG 170095
||| | || || |||||||||||||||||||| || || ||| | || || ||||| |
Sbjct 2724 GGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCTTTTCGTACCTGTAACA 2783
Query 170096 GGTCTTTGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGTGCTTACGAT 170155
|| | |||| || | |||| || | || | || || || || ||||| |||||
Sbjct 2784 GGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAACCTCCGTGCATACGAC 2843
Query 170156 TTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAA 170215
||||| || |||||| | ||||| |||||||| || ||||| || |||||||| ||
Sbjct 2844 TTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGAAACATTCTACACTAAG 2903
Query 170216 AACATCCTATTGAATGAAGGACTTCGTGCATGGTTGGCACCTGCTGATCAACCACATGAA 170275
|| || || | || ||||| ||||||||||| ||||| || ||||| || ||||||
Sbjct 2904 AATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCAAGATCAGCCTCATGAA 2963
Query 170276 AACTTCATCTTCCCAGAAGAAGTTCTTCCGAGAGGTAACGCACTGTGATCCA 170327
||| | | ||||| || || || ||||| | || ||||| || | || ||
Sbjct 2964 AACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCTTTAATTCA 3015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 574473463562520
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