Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq19 807 0.0 >seq19 Length=72585 Score = 807 bits (894), Expect = 0.0 Identities = 766/976 (78%), Gaps = 2/976 (0%) Strand=Plus/Plus Query 163793 ATGGGTGACTTCCACAAACAACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCC 163852 |||| | ||||| || | ||||| || || | ||||||||||| || | |||||||| Sbjct 10183 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 10242 Query 163853 TACGCTGCTTGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGG 163911 ||| | ||| |||||| | || || |||||||| || || | |||||||| ||||| | Sbjct 10243 TACTTTACTTACAGCAA-CTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAG 10301 Query 163912 ACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCT 163971 | ||||||||||| ||||| || || | || || || ||||| || ||||||||||||| Sbjct 10302 ATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 10361 Query 163972 CTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAG 164031 ||||||| || | || | || || || || || |||||||||||||| || ||||||| Sbjct 10362 CTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 10421 Query 164032 CCGCATCCCTTGATGAATGGCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACT 164091 | || || |||||||| |||||||||||||||||||||| ||| ||| |||| | |||| Sbjct 10422 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 10481 Query 164092 TCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTA 164151 || | ||||| || | | |||||||||||||||||||||| || |||| |||| | || | Sbjct 10482 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 10541 Query 164152 TGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCC 164211 |||||||||||||| ||| ||||||||||| || || ||||||||| | || || ||| Sbjct 10542 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601 Query 164212 TGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCA 164271 | || || || ||||||| ||||| |||||||| | |||||| || || || ||||| | Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661 Query 164272 CCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATA 164331 | ||||||| |||| | || ||||| || |||||||||||||| |||||||| ||||| | Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721 Query 164332 TGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGG 164391 |||| || |||||||| ||||| || ||||| || ||| ||||||||||||||| || | Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781 Query 164392 TTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGT 164451 | ||||| || || | ||||| || || || | ||||| ||| || ||||||| Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 10841 Query 164452 TTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGA 164511 | || ||||||||||| || |||||||| || || || ||||||||||| || ||||| | Sbjct 10842 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 10901 Query 164512 TCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 164571 |||||||||||||||||||||||||||| ||||| | ||||||||||| || |||| Sbjct 10902 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 10961 Query 164572 CTGTTGTTGGCATCTGGTTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACG 164631 | || | || ||||||||||| || | ||| |||| || ||||| |||||||| |||| Sbjct 10962 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 11021 Query 164632 GTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAG 164691 | ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| | Sbjct 11022 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 11081 Query 164692 ACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACT 164751 | | | ||||| ||| || ||||||||||| ||||||||||||||||||||||||| Sbjct 11082 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 11141 Query 164752 TCCCTCTGGATCTCGC 164767 |||| || || || || Sbjct 11142 TCCCACTTGACCTTGC 11157 Score = 807 bits (894), Expect = 0.0 Identities = 766/976 (78%), Gaps = 2/976 (0%) Strand=Plus/Minus Query 163793 ATGGGTGACTTCCACAAACAACCGCCTCTATGTTGGTTGGTTCGGCGTTCTGATGATCCC 163852 |||| | ||||| || | ||||| || || | ||||||||||| || | |||||||| Sbjct 36960 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 36901 Query 163853 TACGCTGCTTGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGG 163911 ||| | ||| ||||||| || || |||||||| || || | |||||||| ||||| | Sbjct 36900 TACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAG 36842 Query 163912 ACATCGATGGTATTCGTGAACCTGTTGCAGGTTCGCTCATGTATGGTAACAACATCATCT 163971 | ||||||||||| ||||| || || | || || || ||||| || ||||||||||||| Sbjct 36841 ATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 36782 Query 163972 CTGGTGCAGTTGTTCCCTCGTCCAATGCAATTGGTCTTCACTTCTACCCCATTTGGGAAG 164031 ||||||| || | || | || || || || || |||||||||||||| || ||||||| Sbjct 36781 CTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 36722 Query 164032 CCGCATCCCTTGATGAATGGCTTTACAACGGTGGTCCTTTCCAACTTGTCGTCTTCCACT 164091 | || || |||||||| |||||||||||||||||||||| ||| ||| |||| | |||| Sbjct 36721 CAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACT 36662 Query 164092 TCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTGTCTTACCGTCTTGGTA 164151 || | ||||| || | | |||||||||||||||||||||| || |||| |||| | || | Sbjct 36661 TCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAA 36602 Query 164152 TGCGTCCTTGGATTTGTGTTGCTTACTCTGCACCCGTTGCAGCAGCATCCGCAGTCTTCC 164211 |||||||||||||| ||| ||||||||||| || || ||||||||| | || || ||| Sbjct 36601 TGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542 Query 164212 TGGTCTATCCTTTCGGTCAAGGTTCGTTCTCTGACGCAATGCCCCTGGGCATCTCTGGCA 164271 | || || || ||||||| ||||| |||||||| | |||||| || || || ||||| | Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482 Query 164272 CCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATA 164331 | ||||||| |||| | || ||||| || |||||||||||||| |||||||| ||||| | Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422 Query 164332 TGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGG 164391 |||| || |||||||| ||||| || ||||| || ||| ||||||||||||||| || | Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362 Query 164392 TTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGT 164451 | ||||| || || | ||||| || || || | ||||| ||| || ||||||| Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 36302 Query 164452 TTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGA 164511 | || ||||||||||| || |||||||| || || || ||||||||||| || ||||| | Sbjct 36301 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 36242 Query 164512 TCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 164571 |||||||||||||||||||||||||||| ||||| | ||||||||||| || |||| Sbjct 36241 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 36182 Query 164572 CTGTTGTTGGCATCTGGTTCACCGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACG 164631 | || | || ||||||||||| || | ||| |||| || ||||| |||||||| |||| Sbjct 36181 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 36122 Query 164632 GTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAG 164691 | ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| | Sbjct 36121 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 36062 Query 164692 ACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACT 164751 | | | ||||| ||| || ||||||||||| ||||||||||||||||||||||||| Sbjct 36061 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 36002 Query 164752 TCCCTCTGGATCTCGC 164767 |||| || || || || Sbjct 36001 TCCCACTTGACCTTGC 35986 Score = 574 bits (636), Expect = 5e-159 Identities = 741/1020 (73%), Gaps = 2/1020 (0%) Strand=Plus/Plus Query 165188 GGGTGGTTCGATGTCCTCGATGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGG 165247 || ||||| || | | || ||||||||||| || ||||||||||| || || |||||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 165248 TCTGGACTTCTTCTTTTTCCCA-CTGCTTATCTTGCTATTGGCGGTTGGCTTACTGGGAC 165306 || ||| || || || |||||| ||| || |||| |||| || ||| ||||||| || Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 165307 TACTTTCGCGACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGTGCAAA 165366 || |||| || ||||| || ||||| || |||||||| || || ||||| || Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 165367 CTTTCTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCT 165426 ||| ||||| ||||||| || || ||| | || ||||| ||| || ||||| || || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 165427 CTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGC 165486 ||||| || || || ||||| || ||| | ||| || ||||| ||| | ||| | Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 165487 TTTTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGTTTCATGCTTCGTCAGTTTGAATT 165546 || || || || ||||| || |||| |||| || || ||||| ||||| |||||| | Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 165547 AGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGT 165606 |||||| | || ||||| ||||| || ||||| ||||| | ||||||||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 165607 TTTTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATC 165666 ||||| || || || || ||||| || || ||||| | ||||| || || || || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 165667 TTTCGGGGTCGCAGCAATCTTCAGGTTCCTTCTCTTCCTACAAGGATTCCATAACTGGAC 165726 || || || || | ||| ||| | ||| |||| ||| | ||||| ||||| |||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 165727 CTTGAATCCCTTTCATATGATGGGTGTTGCAGGTATCCTGGGTGGTGCATTGCTTTCTGC 165786 | || || || || |||||||| || || ||| | || || | ||| | |||| ||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 165787 CATCCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGACGATGCAAATACTTT 165846 || || || | || |||||||| || || | |||||||||| | | |||| ||||| Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647 Query 165847 CAAGGCATTTGACTCTACTCAAGAGGAAGAAACCTACTCAATGGTTACTGCAAACCGTTT 165906 | |||||| || | ||||||| ||||| || ||||||||||| || ||||||||||| Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707 Query 165907 CTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCT 165966 |||||| ||||| |||||| | || || ||| ||| | ||| | || ||||||||||| Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767 Query 165967 GTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAA 166026 || || ||||| | || | |||| | | ||| || | || | || || || Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827 Query 166027 CCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGACCCAGAGTTTGA 166086 ||| ||||| || ||||| ||||| ||||||||| | ||||| ||||| || |||||||| Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887 Query 166087 AACCTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTGCTTGGTTGGCACCAGT 166146 ||| |||||||| || || ||||| | || |||||| ||||||| ||| ||||| | Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947 Query 166147 CGATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCTGCCTAGGGGTAACGCGCT 166206 ||||| || ||||| ||| |||| |||||||| || || || || | || ||||| || Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556924667730360