Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_015283.1
Length=176428
Score E
Sequences producing significant alignments: (Bits) Value
seq19 729 0.0
>seq19
Length=72585
Score = 729 bits (808), Expect = 0.0
Identities = 742/967 (77%), Gaps = 0/967 (0%)
Strand=Plus/Plus
Query 168512 ACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCATGTTTATTAACA 168571
||| | ||| | ||||| | ||||||||||| || ||||||||||| |||| | |||
Sbjct 10196 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 10255
Query 168572 GCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCACCTGTCGATATCGACGGAATC 168631
||| | || ||||| || |||||||||||||| || ||||| |||||||| || |||
Sbjct 10256 GCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATC 10315
Query 168632 AGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTCAGGTGCAGTTGTT 168691
| || || ||| | || | || ||||| ||||||||||||||||| ||||| || |
Sbjct 10316 CGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATC 10375
Query 168692 CCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGAT 168751
|| | || ||||| ||||| || |||||||||||||| |||||||||||| | | |||
Sbjct 10376 CCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGAT 10435
Query 168752 GAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATC 168811
|||||| | || || ||||||||||||||| | | | | |||||| | ||||||||
Sbjct 10436 GAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATT 10495
Query 168812 TCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATC 168871
| | | ||||||||| | ||||||| | || | | | |||| ||| | ||||||||
Sbjct 10496 TGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATT 10555
Query 168872 TGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTT 168931
||| ||||| || || || ||| | |||||| || |||||| | ||||||||| |
Sbjct 10556 GCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATC 10615
Query 168932 GGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATG 168991
||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||
Sbjct 10616 GGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATG 10675
Query 168992 TTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCA 169051
|||||||||| || ||||||||||| |||||||| || ||||| ||| || || ||
Sbjct 10676 ATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCT 10735
Query 169052 GGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTA 169111
||| | |||||||| || || ||||| |||||||| |||||||| ||||| || |||||
Sbjct 10736 GGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTC 10795
Query 169112 ATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 169171
||| | |||||||||||| | || ||| ||| || ||||||||||| |||||||||
Sbjct 10796 ATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAA 10855
Query 169172 GAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCA 169231
|| || || || || || || ||||| || |||||||| | | |||||||| || ||
Sbjct 10856 GAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCT 10915
Query 169232 AGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTA 169291
|||||||||||| | || ||||||||||| ||| | | ||||| | | |
Sbjct 10916 TCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATC 10975
Query 169292 TGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAAC 169351
||||| || |||||||||| | || ||||| |||||| | |||||||| ||||| |||
Sbjct 10976 TGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAAC 11035
Query 169352 CAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGA 169411
|| || || |||||| ||||| | ||| ||||||| ||| | | ||| |
Sbjct 11036 CAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCGT 11095
Query 169412 GCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTA 169471
|| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| |
Sbjct 11096 GCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTT 11155
Query 169472 GCATCTG 169478
|||||||
Sbjct 11156 GCATCTG 11162
Score = 729 bits (808), Expect = 0.0
Identities = 742/967 (77%), Gaps = 0/967 (0%)
Strand=Plus/Minus
Query 168512 ACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCATGTTTATTAACA 168571
||| | ||| | ||||| | ||||||||||| || ||||||||||| |||| | |||
Sbjct 36947 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 36888
Query 168572 GCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCACCTGTCGATATCGACGGAATC 168631
||| | || ||||| || |||||||||||||| || ||||| |||||||| || |||
Sbjct 36887 GCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATC 36828
Query 168632 AGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTCAGGTGCAGTTGTT 168691
| || || ||| | || | || ||||| ||||||||||||||||| ||||| || |
Sbjct 36827 CGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATC 36768
Query 168692 CCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGAT 168751
|| | || ||||| ||||| || |||||||||||||| |||||||||||| | | |||
Sbjct 36767 CCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGAT 36708
Query 168752 GAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATC 168811
|||||| | || || ||||||||||||||| | | | | |||||| | ||||||||
Sbjct 36707 GAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATT 36648
Query 168812 TCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATC 168871
| | | ||||||||| | ||||||| | || | | | |||| ||| | ||||||||
Sbjct 36647 TGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATT 36588
Query 168872 TGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTT 168931
||| ||||| || || || ||| | |||||| || |||||| | ||||||||| |
Sbjct 36587 GCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATC 36528
Query 168932 GGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATG 168991
||||||||||||||||||||||| |||||||| || ||||||||||| ||||||||||||
Sbjct 36527 GGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATG 36468
Query 168992 TTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCA 169051
|||||||||| || ||||||||||| |||||||| || ||||| ||| || || ||
Sbjct 36467 ATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCT 36408
Query 169052 GGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTA 169111
||| | |||||||| || || ||||| |||||||| |||||||| ||||| || |||||
Sbjct 36407 GGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTC 36348
Query 169112 ATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 169171
||| | |||||||||||| | || ||| ||| || ||||||||||| |||||||||
Sbjct 36347 ATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAA 36288
Query 169172 GAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCA 169231
|| || || || || || || ||||| || |||||||| | | |||||||| || ||
Sbjct 36287 GAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCT 36228
Query 169232 AGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTA 169291
|||||||||||| | || ||||||||||| ||| | | ||||| | | |
Sbjct 36227 TCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATC 36168
Query 169292 TGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAAC 169351
||||| || |||||||||| | || ||||| |||||| | |||||||| ||||| |||
Sbjct 36167 TGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAAC 36108
Query 169352 CAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGA 169411
|| || || |||||| ||||| | ||| ||||||| ||| | | ||| |
Sbjct 36107 CAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCGT 36048
Query 169412 GCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTA 169471
|| ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| |
Sbjct 36047 GCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTT 35988
Query 169472 GCATCTG 169478
|||||||
Sbjct 35987 GCATCTG 35981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564441465945120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |