Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq19 729 0.0 >seq19 Length=72585 Score = 729 bits (808), Expect = 0.0 Identities = 742/967 (77%), Gaps = 0/967 (0%) Strand=Plus/Plus Query 168512 ACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCATGTTTATTAACA 168571 ||| | ||| | ||||| | ||||||||||| || ||||||||||| |||| | ||| Sbjct 10196 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 10255 Query 168572 GCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCACCTGTCGATATCGACGGAATC 168631 ||| | || ||||| || |||||||||||||| || ||||| |||||||| || ||| Sbjct 10256 GCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATC 10315 Query 168632 AGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTCAGGTGCAGTTGTT 168691 | || || ||| | || | || ||||| ||||||||||||||||| ||||| || | Sbjct 10316 CGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATC 10375 Query 168692 CCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGAT 168751 || | || ||||| ||||| || |||||||||||||| |||||||||||| | | ||| Sbjct 10376 CCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGAT 10435 Query 168752 GAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATC 168811 |||||| | || || ||||||||||||||| | | | | |||||| | |||||||| Sbjct 10436 GAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATT 10495 Query 168812 TCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATC 168871 | | | ||||||||| | ||||||| | || | | | |||| ||| | |||||||| Sbjct 10496 TGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATT 10555 Query 168872 TGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTT 168931 ||| ||||| || || || ||| | |||||| || |||||| | ||||||||| | Sbjct 10556 GCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATC 10615 Query 168932 GGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATG 168991 ||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||||| Sbjct 10616 GGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATG 10675 Query 168992 TTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCA 169051 |||||||||| || ||||||||||| |||||||| || ||||| ||| || || || Sbjct 10676 ATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCT 10735 Query 169052 GGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTA 169111 ||| | |||||||| || || ||||| |||||||| |||||||| ||||| || ||||| Sbjct 10736 GGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTC 10795 Query 169112 ATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 169171 ||| | |||||||||||| | || ||| ||| || ||||||||||| ||||||||| Sbjct 10796 ATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAA 10855 Query 169172 GAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCA 169231 || || || || || || || ||||| || |||||||| | | |||||||| || || Sbjct 10856 GAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCT 10915 Query 169232 AGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTA 169291 |||||||||||| | || ||||||||||| ||| | | ||||| | | | Sbjct 10916 TCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATC 10975 Query 169292 TGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAAC 169351 ||||| || |||||||||| | || ||||| |||||| | |||||||| ||||| ||| Sbjct 10976 TGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAAC 11035 Query 169352 CAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGA 169411 || || || |||||| ||||| | ||| ||||||| ||| | | ||| | Sbjct 11036 CAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCGT 11095 Query 169412 GCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTA 169471 || ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| | Sbjct 11096 GCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTT 11155 Query 169472 GCATCTG 169478 ||||||| Sbjct 11156 GCATCTG 11162 Score = 729 bits (808), Expect = 0.0 Identities = 742/967 (77%), Gaps = 0/967 (0%) Strand=Plus/Minus Query 168512 ACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCATGTTTATTAACA 168571 ||| | ||| | ||||| | ||||||||||| || ||||||||||| |||| | ||| Sbjct 36947 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACA 36888 Query 168572 GCAGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCACCTGTCGATATCGACGGAATC 168631 ||| | || ||||| || |||||||||||||| || ||||| |||||||| || ||| Sbjct 36887 GCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATC 36828 Query 168632 AGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTCAGGTGCAGTTGTT 168691 | || || ||| | || | || ||||| ||||||||||||||||| ||||| || | Sbjct 36827 CGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATC 36768 Query 168692 CCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGCAGCTACAATCGAT 168751 || | || ||||| ||||| || |||||||||||||| |||||||||||| | | ||| Sbjct 36767 CCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGAT 36708 Query 168752 GAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTAATCGGAATC 168811 |||||| | || || ||||||||||||||| | | | | |||||| | |||||||| Sbjct 36707 GAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATT 36648 Query 168812 TCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGACTAGGTATGAGACCTTGGATC 168871 | | | ||||||||| | ||||||| | || | | | |||| ||| | |||||||| Sbjct 36647 TGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATT 36588 Query 168872 TGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCTTGTATACCCATTT 168931 ||| ||||| || || || ||| | |||||| || |||||| | ||||||||| | Sbjct 36587 GCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATC 36528 Query 168932 GGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAACATTCAACTTCATG 168991 ||||||||||||||||||||||| |||||||| || ||||||||||| |||||||||||| Sbjct 36527 GGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATG 36468 Query 168992 TTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCA 169051 |||||||||| || ||||||||||| |||||||| || ||||| ||| || || || Sbjct 36467 ATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCT 36408 Query 169052 GGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTA 169111 ||| | |||||||| || || ||||| |||||||| |||||||| ||||| || ||||| Sbjct 36407 GGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTC 36348 Query 169112 ATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 169171 ||| | |||||||||||| | || ||| ||| || ||||||||||| ||||||||| Sbjct 36347 ATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAA 36288 Query 169172 GAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCA 169231 || || || || || || || ||||| || |||||||| | | |||||||| || || Sbjct 36287 GAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCT 36228 Query 169232 AGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCCAGTTGTATGTGTA 169291 |||||||||||| | || ||||||||||| ||| | | ||||| | | | Sbjct 36227 TCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATC 36168 Query 169292 TGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGGATTTAACTTTAAC 169351 ||||| || |||||||||| | || ||||| |||||| | |||||||| ||||| ||| Sbjct 36167 TGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAAC 36108 Query 169352 CAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTGACGTACTTAACAGA 169411 || || || |||||| ||||| | ||| ||||||| ||| | | ||| | Sbjct 36107 CAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACCGT 36048 Query 169412 GCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACTTCCCACTAGACTTA 169471 || ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||| | Sbjct 36047 GCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTT 35988 Query 169472 GCATCTG 169478 ||||||| Sbjct 35987 GCATCTG 35981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564441465945120