Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq19 679 0.0
>seq19
Length=72585
Score = 679 bits (752), Expect = 0.0
Identities = 741/984 (75%), Gaps = 0/984 (0%)
Strand=Plus/Plus
Query 171828 ATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCC 171887
|||| | || |||||| | ||| | |||| | ||||||||||| ||| | ||||||||
Sbjct 10183 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 10242
Query 171888 ATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGA 171947
||| || |||||| | || |||||||| ||||| ||||| || |||||||| ||
Sbjct 10243 TACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 171948 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 172007
|||||| || ||| | || ||||| | || || | | || || ||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 172008 TGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGGGAAGC 172067
|||||| || | || |||| ||||| || || || ||||||||||| |||||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 172068 AGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTT 172127
||| | | ||||| ||| | ||||| ||||||||||| ||| | | | | |||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 172128 CCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTAT 172187
| | ||||| || | |||||||||| | ||||||| || || | | | ||||| ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 172188 GAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCT 172247
| | || ||||| |||||| || || || |||||| |||||||| ||||| ||| |
Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602
Query 172248 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 172307
|| || ||| ||||||||||||| ||||||||||| ||||| || ||||| || || ||
Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662
Query 172308 GTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACAT 172367
|||||||| ||| |||| ||||| || ||||| ||||| || ||||| || ||||||||
Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722
Query 172368 GGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGT 172427
| || || || || | || || || || | ||||| |||||||||||||| | ||
Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782
Query 172428 TACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTT 172487
|| || ||||| ||| | ||||| ||||| || || ||| |||||||||||
Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842
Query 172488 CGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTAT 172547
||||||||||||||| || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902
Query 172548 CTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCC 172607
|||||| || ||||| |||||||||||| | || ||||||||||| ||| | | ||
Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962
Query 172608 TGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 172667
|| | | | ||||| || |||||||||| | || ||||| ||||||||||||||
Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022
Query 172668 TTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGA 172727
|||||||||||||| || || |||||| | ||||| | || ||||||| |||
Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 11082
Query 172728 CGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTT 172787
| | ||| | || ||||| ||||||||||| ||||| || | || || ||||||||
Sbjct 11083 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 11142
Query 172788 CCCATTAGACCTTGCTTCTGCAGA 172811
|||| | |||||||| |||| |||
Sbjct 11143 CCCACTTGACCTTGCATCTGTAGA 11166
Score = 679 bits (752), Expect = 0.0
Identities = 741/984 (75%), Gaps = 0/984 (0%)
Strand=Plus/Minus
Query 171828 ATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCC 171887
|||| | || |||||| | ||| | |||| | ||||||||||| ||| | ||||||||
Sbjct 36960 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 36901
Query 171888 ATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGA 171947
||| || |||||| | || |||||||| ||||| ||||| || |||||||| ||
Sbjct 36900 TACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 171948 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 172007
|||||| || ||| | || ||||| | || || | | || || ||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 172008 TGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGGGAAGC 172067
|||||| || | || |||| ||||| || || || ||||||||||| |||||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 172068 AGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTT 172127
||| | | ||||| ||| | ||||| ||||||||||| ||| | | | | |||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 172128 CCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTAT 172187
| | ||||| || | |||||||||| | ||||||| || || | | | ||||| ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 172188 GAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCT 172247
| | || ||||| |||||| || || || |||||| |||||||| ||||| ||| |
Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541
Query 172248 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 172307
|| || ||| ||||||||||||| ||||||||||| ||||| || ||||| || || ||
Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481
Query 172308 GTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACAT 172367
|||||||| ||| |||| ||||| || ||||| ||||| || ||||| || ||||||||
Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421
Query 172368 GGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGT 172427
| || || || || | || || || || | ||||| |||||||||||||| | ||
Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361
Query 172428 TACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTT 172487
|| || ||||| ||| | ||||| ||||| || || ||| |||||||||||
Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301
Query 172488 CGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTAT 172547
||||||||||||||| || |||||||| ||||| |||||||||||||| || ||||||||
Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241
Query 172548 CTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCC 172607
|||||| || ||||| |||||||||||| | || ||||||||||| ||| | | ||
Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181
Query 172608 TGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 172667
|| | | | ||||| || |||||||||| | || ||||| ||||||||||||||
Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121
Query 172668 TTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGA 172727
|||||||||||||| || || |||||| | ||||| | || ||||||| |||
Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 36061
Query 172728 CGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTT 172787
| | ||| | || ||||| ||||||||||| ||||| || | || || ||||||||
Sbjct 36060 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 36001
Query 172788 CCCATTAGACCTTGCTTCTGCAGA 172811
|||| | |||||||| |||| |||
Sbjct 36000 CCCACTTGACCTTGCATCTGTAGA 35977
Score = 531 bits (588), Expect = 6e-146
Identities = 745/1045 (71%), Gaps = 23/1045 (2%)
Strand=Plus/Plus
Query 172945 GGTTGGTTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGG 173004
|| |||||||| | ||||||||| | ||| | ||||||||||||||| | || |||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 173005 TCTGGTCTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACT 173064
|| || ||||| | | || ||||| ||| || | | ||||| ||||| |||||
Sbjct 2049 TCAGGAATTTTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAACA 2108
Query 173065 ACCTTCGTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAAC 173124
|| ||||| || |||||||| ||||| ||| | ||| |||||| ||||| ||| |||
Sbjct 2109 ACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAAC 2168
Query 173125 TTTTTAACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTT 173184
|| | ||| | ||||| || ||||| || |||| ||| ||||| |||||
Sbjct 2169 TTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCTT 2228
Query 173185 TGGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAAC 173244
|||||||| |||||||||||| ||| |||||||| || || || ||| ||||||
Sbjct 2229 TGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGACA 2288
Query 173245 TTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATC 173304
|| |||||| | || || | || ||| | || || || ||||||||||| ||||| ||
Sbjct 2289 TTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAATT 2348
Query 173305 GCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTC 173364
||| | ||| || | || |||||||| | |||||||| || |||||| ||
Sbjct 2349 GCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGTA 2408
Query 173365 TTCACTAGC-ATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTC 173423
|| || | | || | || |||||||| || || | |||||||| ||||||||
Sbjct 2409 TT-TGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 173424 ATTCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTAC 173483
||| ||||| || | ||| || |||| || | ||| | ||||| ||||||||| ||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527
Query 173484 ATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGC 173543
| | || ||||| ||||||||||| || || || |||| || | |||| | || |||||
Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587
Query 173544 CATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGG 173603
||||| || ||||| || |||||||| | | |||| || ||| ||
Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAG------------ATGGTGATGG 2635
Query 173604 TAAGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAG 173663
||||| | |||||| | |||||| | || || || | ||||| |||||
Sbjct 2636 -----TTCAAAC----ACTTTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTC 2686
Query 173664 TATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAG 173723
||| | ||||| ||| | |||||||||||||| || ||| | || || || ||||| |
Sbjct 2687 AATGGTAACAGCAAACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCG 2746
Query 173724 ATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGG 173783
| | |||||| | ||| | ||||||||||| | || | |||| ||| | | ||
Sbjct 2747 TTGGCTTCACTTCTTTATGCTTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGG 2806
Query 173784 TATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGC 173843
| | ||||| | ||||||||||| | ||||||||||| ||||| |||||||| | ||
Sbjct 2807 TGTTGTAGGATTAGCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGC 2866
Query 173844 AGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTAT 173903
||| |||||||| ||||| || || ||||||||||||||||| |||||||| ||||||||
Sbjct 2867 AGCTGAAGATCCTGAGTTTGAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTAT 2926
Query 173904 GAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGT 173963
| ||||||||| || || |||||| || ||||| ||| | ||||| || || || ||
Sbjct 2927 TCGTGCATGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGT 2986
Query 173964 GTTACCAAGAGGTAACGCACTTTAA 173988
| ||| | || ||||| ||||||
Sbjct 2987 ACTTCCACGTGGAAACGCTCTTTAA 3011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588051060337840
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