Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq19 679 0.0 >seq19 Length=72585 Score = 679 bits (752), Expect = 0.0 Identities = 741/984 (75%), Gaps = 0/984 (0%) Strand=Plus/Plus Query 171828 ATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCC 171887 |||| | || |||||| | ||| | |||| | ||||||||||| ||| | |||||||| Sbjct 10183 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 10242 Query 171888 ATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGA 171947 ||| || |||||| | || |||||||| ||||| ||||| || |||||||| || Sbjct 10243 TACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302 Query 171948 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 172007 |||||| || ||| | || ||||| | || || | | || || |||||||||||||| Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362 Query 172008 TGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGGGAAGC 172067 |||||| || | || |||| ||||| || || || ||||||||||| ||||||||||| Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422 Query 172068 AGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTT 172127 ||| | | ||||| ||| | ||||| ||||||||||| ||| | | | | ||||| Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482 Query 172128 CCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTAT 172187 | | ||||| || | |||||||||| | ||||||| || || | | | ||||| || Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542 Query 172188 GAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCT 172247 | | || ||||| |||||| || || || |||||| |||||||| ||||| ||| | Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602 Query 172248 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 172307 || || ||| ||||||||||||| ||||||||||| ||||| || ||||| || || || Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662 Query 172308 GTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACAT 172367 |||||||| ||| |||| ||||| || ||||| ||||| || ||||| || |||||||| Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722 Query 172368 GGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGT 172427 | || || || || | || || || || | ||||| |||||||||||||| | || Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782 Query 172428 TACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTT 172487 || || ||||| ||| | ||||| ||||| || || ||| ||||||||||| Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842 Query 172488 CGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTAT 172547 ||||||||||||||| || |||||||| ||||| |||||||||||||| || |||||||| Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902 Query 172548 CTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCC 172607 |||||| || ||||| |||||||||||| | || ||||||||||| ||| | | || Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962 Query 172608 TGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 172667 || | | | ||||| || |||||||||| | || ||||| |||||||||||||| Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022 Query 172668 TTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGA 172727 |||||||||||||| || || |||||| | ||||| | || ||||||| ||| Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 11082 Query 172728 CGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTT 172787 | | ||| | || ||||| ||||||||||| ||||| || | || || |||||||| Sbjct 11083 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 11142 Query 172788 CCCATTAGACCTTGCTTCTGCAGA 172811 |||| | |||||||| |||| ||| Sbjct 11143 CCCACTTGACCTTGCATCTGTAGA 11166 Score = 679 bits (752), Expect = 0.0 Identities = 741/984 (75%), Gaps = 0/984 (0%) Strand=Plus/Minus Query 171828 ATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCC 171887 |||| | || |||||| | ||| | |||| | ||||||||||| ||| | |||||||| Sbjct 36960 ATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCC 36901 Query 171888 ATGTTTGCTCACAGCAGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGA 171947 ||| || |||||| | || |||||||| ||||| ||||| || |||||||| || Sbjct 36900 TACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841 Query 171948 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 172007 |||||| || ||| | || ||||| | || || | | || || |||||||||||||| Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781 Query 172008 TGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGGGAAGC 172067 |||||| || | || |||| ||||| || || || ||||||||||| ||||||||||| Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721 Query 172068 AGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTAATCTTCCACTT 172127 ||| | | ||||| ||| | ||||| ||||||||||| ||| | | | | ||||| Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661 Query 172128 CCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATACAGATTAGGTAT 172187 | | ||||| || | |||||||||| | ||||||| || || | | | ||||| || Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601 Query 172188 GAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTTGCTGTGTTCCT 172247 | | || ||||| |||||| || || || |||||| |||||||| ||||| ||| | Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541 Query 172248 TGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGTATCTCAGGTAC 172307 || || ||| ||||||||||||| ||||||||||| ||||| || ||||| || || || Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481 Query 172308 GTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACAT 172367 |||||||| ||| |||| ||||| || ||||| ||||| || ||||| || |||||||| Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421 Query 172368 GGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGT 172427 | || || || || | || || || || | ||||| |||||||||||||| | || Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361 Query 172428 TACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTT 172487 || || ||||| ||| | ||||| ||||| || || ||| ||||||||||| Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301 Query 172488 CGGACAAGAAGAAGAAACATACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTAT 172547 ||||||||||||||| || |||||||| ||||| |||||||||||||| || |||||||| Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241 Query 172548 CTTCCAGTATGCTTCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCC 172607 |||||| || ||||| |||||||||||| | || ||||||||||| ||| | | || Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181 Query 172608 TGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGG 172667 || | | | ||||| || |||||||||| | || ||||| |||||||||||||| Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121 Query 172668 TTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGA 172727 |||||||||||||| || || |||||| | ||||| | || ||||||| ||| Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 36061 Query 172728 CGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTT 172787 | | ||| | || ||||| ||||||||||| ||||| || | || || |||||||| Sbjct 36060 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 36001 Query 172788 CCCATTAGACCTTGCTTCTGCAGA 172811 |||| | |||||||| |||| ||| Sbjct 36000 CCCACTTGACCTTGCATCTGTAGA 35977 Score = 531 bits (588), Expect = 6e-146 Identities = 745/1045 (71%), Gaps = 23/1045 (2%) Strand=Plus/Plus Query 172945 GGTTGGTTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGG 173004 || |||||||| | ||||||||| | ||| | ||||||||||||||| | || ||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 173005 TCTGGTCTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACT 173064 || || ||||| | | || ||||| ||| || | | ||||| ||||| ||||| Sbjct 2049 TCAGGAATTTTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAACA 2108 Query 173065 ACCTTCGTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAAC 173124 || ||||| || |||||||| ||||| ||| | ||| |||||| ||||| ||| ||| Sbjct 2109 ACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAAC 2168 Query 173125 TTTTTAACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTT 173184 || | ||| | ||||| || ||||| || |||| ||| ||||| ||||| Sbjct 2169 TTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCTT 2228 Query 173185 TGGGGACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAAC 173244 |||||||| |||||||||||| ||| |||||||| || || || ||| |||||| Sbjct 2229 TGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGACA 2288 Query 173245 TTTGTAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATC 173304 || |||||| | || || | || ||| | || || || ||||||||||| ||||| || Sbjct 2289 TTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAATT 2348 Query 173305 GCAGGACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTC 173364 ||| | ||| || | || |||||||| | |||||||| || |||||| || Sbjct 2349 GCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGTA 2408 Query 173365 TTCACTAGC-ATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTC 173423 || || | | || | || |||||||| || || | |||||||| |||||||| Sbjct 2409 TT-TGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 173424 ATTCGGTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTAC 173483 ||| ||||| || | ||| || |||| || | ||| | ||||| ||||||||| || Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 173484 ATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGC 173543 | | || ||||| ||||||||||| || || || |||| || | |||| | || ||||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 173544 CATTCATGGTGCAACAGTGCAGAACACATTGTATGAAGACACATCACAATATACTGAAGG 173603 ||||| || ||||| || |||||||| | | |||| || ||| || Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAG------------ATGGTGATGG 2635 Query 173604 TAAGATTCAATCCACAACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAG 173663 ||||| | |||||| | |||||| | || || || | ||||| ||||| Sbjct 2636 -----TTCAAAC----ACTTTCCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTC 2686 Query 173664 TATGATTACAGCGAACAGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAG 173723 ||| | ||||| ||| | |||||||||||||| || ||| | || || || ||||| | Sbjct 2687 AATGGTAACAGCAAACCGTTTCTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCG 2746 Query 173724 ATTTTTACACTTCCTCATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGG 173783 | | |||||| | ||| | ||||||||||| | || | |||| ||| | | || Sbjct 2747 TTGGCTTCACTTCTTTATGCTTTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGG 2806 Query 173784 TATCGTAGGTCTTGCACTTAACCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGC 173843 | | ||||| | ||||||||||| | ||||||||||| ||||| |||||||| | || Sbjct 2807 TGTTGTAGGATTAGCACTTAACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGC 2866 Query 173844 AGCAGAAGATCCAGAGTTCGAGACTTTCTACACTAAGAATATACTTCTTAATGAAGGTAT 173903 ||| |||||||| ||||| || || ||||||||||||||||| |||||||| |||||||| Sbjct 2867 AGCTGAAGATCCTGAGTTTGAAACATTCTACACTAAGAATATTCTTCTTAACGAAGGTAT 2926 Query 173904 GAGAGCATGGATGTCATCTGTAGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGT 173963 | ||||||||| || || |||||| || ||||| ||| | ||||| || || || || Sbjct 2927 TCGTGCATGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGT 2986 Query 173964 GTTACCAAGAGGTAACGCACTTTAA 173988 | ||| | || ||||| |||||| Sbjct 2987 ACTTCCACGTGGAAACGCTCTTTAA 3011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051060337840