Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq19 785 0.0 >seq19 Length=72585 Score = 785 bits (870), Expect = 0.0 Identities = 766/981 (78%), Gaps = 4/981 (0%) Strand=Plus/Plus Query 162394 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 162453 ||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| || Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 162454 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 162512 ||| | | |||||| | || || |||||||| || || | |||||||| ||||| || Sbjct 10244 ACTTTACTTACAGCAA-CTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302 Query 162513 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 162572 ||||| || |||||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362 Query 162573 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 162632 |||||| || | || | || ||||| || || ||||||||||| || ||||||||||| Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422 Query 162633 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTT 162692 || || |||||||||||||| || ||||||||||||| ||| || | |||| ||||| Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482 Query 162693 CCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTAT 162752 | | ||||| || | | | |||||||| ||||| ||||| || |||| |||| | || || Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542 Query 162753 GCGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCC 162811 |||||| ||||| ||| ||||| |||||||| ||||| ||||||||| | || || ||| Sbjct 10543 GCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601 Query 162812 TGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTA 162871 | || || || ||||||| |||||||||||||| | |||||| | ||||| ||| | Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661 Query 162872 CATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACA 162931 | ||||||| |||| | || ||||| || ||||||||||| || ||||| || ||||||| Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721 Query 162932 TGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGG 162991 || | ||||| || ||||| |||||||||||||| ||| ||||||||||||||| | | Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781 Query 162992 TTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGT 163051 | || || || ||| |||||||||| ||||| | ||||| ||| || ||||||| Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 10841 Query 163052 TCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGA 163111 |||| |||||||||||||| ||||||||||| || || || ||||||||||| ||| | | Sbjct 10842 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 10901 Query 163112 TCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 163171 |||||||||| || |||||||||||||| ||||| | ||||||||||| || |||| Sbjct 10902 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 10961 Query 163172 CTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACG 163231 | || | || ||||||||||| || | || | ||||| ||||| |||||||| |||| Sbjct 10962 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 11021 Query 163232 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 163291 | ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| | Sbjct 11022 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 11081 Query 163292 ACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACT 163351 | | | |||||||| | ||||||||||| ||||||||||| || |||||||||| Sbjct 11082 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 11141 Query 163352 TCCCACTTGACCTGGCAGCTG 163372 ||||||||||||| ||| ||| Sbjct 11142 TCCCACTTGACCTTGCATCTG 11162 Score = 785 bits (870), Expect = 0.0 Identities = 766/981 (78%), Gaps = 4/981 (0%) Strand=Plus/Minus Query 162394 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 162453 ||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| || Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 162454 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 162512 ||| | | ||||||| || || |||||||| || || | |||||||| ||||| || Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841 Query 162513 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 162572 ||||| || |||||||| || || |||| ||||| ||||| || |||||||||||||| Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781 Query 162573 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 162632 |||||| || | || | || ||||| || || ||||||||||| || ||||||||||| Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721 Query 162633 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTT 162692 || || |||||||||||||| || ||||||||||||| ||| || | |||| ||||| Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661 Query 162693 CCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTAT 162752 | | ||||| || | | | |||||||| ||||| ||||| || |||| |||| | || || Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601 Query 162753 GCGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCC 162811 |||||| ||||| ||| ||||| |||||||| ||||| ||||||||| | || || ||| Sbjct 36600 GCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542 Query 162812 TGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTA 162871 | || || || ||||||| |||||||||||||| | |||||| | ||||| ||| | Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482 Query 162872 CATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACA 162931 | ||||||| |||| | || ||||| || ||||||||||| || ||||| || ||||||| Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422 Query 162932 TGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGG 162991 || | ||||| || ||||| |||||||||||||| ||| ||||||||||||||| | | Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362 Query 162992 TTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGT 163051 | || || || ||| |||||||||| ||||| | ||||| ||| || ||||||| Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 36302 Query 163052 TCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGA 163111 |||| |||||||||||||| ||||||||||| || || || ||||||||||| ||| | | Sbjct 36301 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 36242 Query 163112 TCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 163171 |||||||||| || |||||||||||||| ||||| | ||||||||||| || |||| Sbjct 36241 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 36182 Query 163172 CTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACG 163231 | || | || ||||||||||| || | || | ||||| ||||| |||||||| |||| Sbjct 36181 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 36122 Query 163232 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 163291 | ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| | Sbjct 36121 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 36062 Query 163292 ACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACT 163351 | | | |||||||| | ||||||||||| ||||||||||| || |||||||||| Sbjct 36061 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 36002 Query 163352 TCCCACTTGACCTGGCAGCTG 163372 ||||||||||||| ||| ||| Sbjct 36001 TCCCACTTGACCTTGCATCTG 35981 Score = 567 bits (628), Expect = 8e-157 Identities = 747/1028 (73%), Gaps = 8/1028 (1%) Strand=Plus/Plus Query 163615 gggTGGTTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGG 163674 || |||||||| | | || |||||||||||||| |||||||||||||| | |||||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 163675 TCTGGATTACTACTTCTTCCCAC-TGCTTATATGGCAATTGGTGGCTGGCTTACTGGTAC 163733 || ||| | || || |||||| ||| || | ||| ||||||| ||| ||||||| || Sbjct 2049 TCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 163734 AACTTTCGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAA 163793 ||| ||||| || || |||||||| || || | |||| ||| || |||||||| ||| Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 163794 TTTTCTCACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTTCT 163853 || || ||| |||| || ||||| || || || ||||| ||| || |||||||| || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 163854 CTGGGGTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAA 163913 ||||| || || || || || || ||| || ||| || ||||| ||| | |||| Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 163914 TTTTGTGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACT 163973 || || ||||| ||||| || || | | || || || ||||| || ||||||||| | Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 163974 TGCTCGCCTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGT 164033 ||| || | ||| | || ||||| |||||||| ||||| | ||||| ||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 164034 CTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATC 164093 || || ||| || || || ||||| || || |||||| | |||||||| || || || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 164094 TTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGAC 164153 ||||| || || | ||| ||| | ||| | | ||| | ||||| || || |||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 164154 TTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGC 164213 | ||||| ||||| ||||||||||| |||||| |||| || | |||| | || | ||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 164214 TATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTT 164273 |||||||||| || || || || ||| | | |||||||| || ||||||| || Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647 Query 164274 TAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTT 164333 || ||| | | || || | ||||||||||| || ||||| || |||||||| || Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707 Query 164334 CTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTT 164393 |||||| ||||| |||||||| || || ||||||||||| |||||||| || || ||| | Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767 Query 164394 GTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAA 164453 || || ||||| | || |||||| || | |||| || | || | || || || Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827 Query 164454 TCTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGA 164513 || ||||| ||||| || ||| |||||||| | ||||| |||||||||||||| || Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887 Query 164514 GACTTTCTATACCAAGAACA-TCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAG 164572 || ||||| || ||||| | |||| || |||||||| | ||||||||| | ||| | Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTT-AACGAAGGTATTCGTGCATGGATGGCAGCTC 2946 Query 164573 TTGACCAGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGC 164630 || |||| || || ||| |||| ||||| || || ||||| || | || || || Sbjct 2947 AAGATCAGCCTCATGAAAAC--CTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGC 3004 Query 164631 GCTTTAAT 164638 ||||||| Sbjct 3005 TCTTTAAT 3012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557583867573800