Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_015285.1
Length=174285
Score E
Sequences producing significant alignments: (Bits) Value
seq19 785 0.0
>seq19
Length=72585
Score = 785 bits (870), Expect = 0.0
Identities = 766/981 (78%), Gaps = 4/981 (0%)
Strand=Plus/Plus
Query 162394 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 162453
||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| ||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 162454 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 162512
||| | | |||||| | || || |||||||| || || | |||||||| ||||| ||
Sbjct 10244 ACTTTACTTACAGCAA-CTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 162513 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 162572
||||| || |||||||| || || |||| ||||| ||||| || ||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 162573 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 162632
|||||| || | || | || ||||| || || ||||||||||| || |||||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 162633 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTT 162692
|| || |||||||||||||| || ||||||||||||| ||| || | |||| |||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 162693 CCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTAT 162752
| | ||||| || | | | |||||||| ||||| ||||| || |||| |||| | || ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 162753 GCGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCC 162811
|||||| ||||| ||| ||||| |||||||| ||||| ||||||||| | || || |||
Sbjct 10543 GCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 10601
Query 162812 TGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTA 162871
| || || || ||||||| |||||||||||||| | |||||| | ||||| ||| |
Sbjct 10602 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 10661
Query 162872 CATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACA 162931
| ||||||| |||| | || ||||| || ||||||||||| || ||||| || |||||||
Sbjct 10662 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 10721
Query 162932 TGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGG 162991
|| | ||||| || ||||| |||||||||||||| ||| ||||||||||||||| | |
Sbjct 10722 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 10781
Query 162992 TTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGT 163051
| || || || ||| |||||||||| ||||| | ||||| ||| || |||||||
Sbjct 10782 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 10841
Query 163052 TCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGA 163111
|||| |||||||||||||| ||||||||||| || || || ||||||||||| ||| | |
Sbjct 10842 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 10901
Query 163112 TCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 163171
|||||||||| || |||||||||||||| ||||| | ||||||||||| || ||||
Sbjct 10902 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 10961
Query 163172 CTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACG 163231
| || | || ||||||||||| || | || | ||||| ||||| |||||||| ||||
Sbjct 10962 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 11021
Query 163232 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 163291
| ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| |
Sbjct 11022 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 11081
Query 163292 ACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACT 163351
| | | |||||||| | ||||||||||| ||||||||||| || ||||||||||
Sbjct 11082 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 11141
Query 163352 TCCCACTTGACCTGGCAGCTG 163372
||||||||||||| ||| |||
Sbjct 11142 TCCCACTTGACCTTGCATCTG 11162
Score = 785 bits (870), Expect = 0.0
Identities = 766/981 (78%), Gaps = 4/981 (0%)
Strand=Plus/Minus
Query 162394 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 162453
||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| ||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 162454 ACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 162512
||| | | ||||||| || || |||||||| || || | |||||||| ||||| ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 162513 CATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTC 162572
||||| || |||||||| || || |||| ||||| ||||| || ||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 162573 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 162632
|||||| || | || | || ||||| || || ||||||||||| || |||||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 162633 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTT 162692
|| || |||||||||||||| || ||||||||||||| ||| || | |||| |||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 162693 CCTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTAT 162752
| | ||||| || | | | |||||||| ||||| ||||| || |||| |||| | || ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 162753 GCGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCC 162811
|||||| ||||| ||| ||||| |||||||| ||||| ||||||||| | || || |||
Sbjct 36600 GCGTCCTTGGAT-TGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCA 36542
Query 162812 TGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTA 162871
| || || || ||||||| |||||||||||||| | |||||| | ||||| ||| |
Sbjct 36541 TCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAA 36482
Query 162872 CATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACA 162931
| ||||||| |||| | || ||||| || ||||||||||| || ||||| || |||||||
Sbjct 36481 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 36422
Query 162932 TGTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGG 162991
|| | ||||| || ||||| |||||||||||||| ||| ||||||||||||||| | |
Sbjct 36421 TGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCG 36362
Query 162992 TTACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGT 163051
| || || || ||| |||||||||| ||||| | ||||| ||| || |||||||
Sbjct 36361 TAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGT 36302
Query 163052 TCGGTCAAGAAGAAGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGA 163111
|||| |||||||||||||| ||||||||||| || || || ||||||||||| ||| | |
Sbjct 36301 TCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTA 36242
Query 163112 TCTTCCAATATGCATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGC 163171
|||||||||| || |||||||||||||| ||||| | ||||||||||| || ||||
Sbjct 36241 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGC 36182
Query 163172 CTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACG 163231
| || | || ||||||||||| || | || | ||||| ||||| |||||||| ||||
Sbjct 36181 CAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACG 36122
Query 163232 GTTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGTTGAACACCTGGGCAG 163291
| ||||||||||||||||| | | ||| | || ||||| | ||||| ||||| |
Sbjct 36121 GATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTG 36062
Query 163292 ACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACT 163351
| | | |||||||| | ||||||||||| ||||||||||| || ||||||||||
Sbjct 36061 ATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 36002
Query 163352 TCCCACTTGACCTGGCAGCTG 163372
||||||||||||| ||| |||
Sbjct 36001 TCCCACTTGACCTTGCATCTG 35981
Score = 567 bits (628), Expect = 8e-157
Identities = 747/1028 (73%), Gaps = 8/1028 (1%)
Strand=Plus/Plus
Query 163615 gggTGGTTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGG 163674
|| |||||||| | | || |||||||||||||| |||||||||||||| | ||||||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 163675 TCTGGATTACTACTTCTTCCCAC-TGCTTATATGGCAATTGGTGGCTGGCTTACTGGTAC 163733
|| ||| | || || |||||| ||| || | ||| ||||||| ||| ||||||| ||
Sbjct 2049 TCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 163734 AACTTTCGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAA 163793
||| ||||| || || |||||||| || || | |||| ||| || |||||||| |||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 163794 TTTTCTCACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTTCT 163853
|| || ||| |||| || ||||| || || || ||||| ||| || |||||||| ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 163854 CTGGGGTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAA 163913
||||| || || || || || || ||| || ||| || ||||| ||| | ||||
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 163914 TTTTGTGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACT 163973
|| || ||||| ||||| || || | | || || || ||||| || ||||||||| |
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 163974 TGCTCGCCTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGT 164033
||| || | ||| | || ||||| |||||||| ||||| | ||||| |||||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 164034 CTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATC 164093
|| || ||| || || || ||||| || || |||||| | |||||||| || || ||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 164094 TTTTGGAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGAC 164153
||||| || || | ||| ||| | ||| | | ||| | ||||| || || ||||||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527
Query 164154 TTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGC 164213
| ||||| ||||| ||||||||||| |||||| |||| || | |||| | || | |||
Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587
Query 164214 TATTCACGGAGTCACAGTTGAAAATACATTGTATGAAGATGGAGAACAAGCAAACACCTT 164273
|||||||||| || || || || ||| | | |||||||| || ||||||| ||
Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647
Query 164274 TAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTT 164333
|| ||| | | || || | ||||||||||| || ||||| || |||||||| ||
Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707
Query 164334 CTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTT 164393
|||||| ||||| |||||||| || || ||||||||||| |||||||| || || ||| |
Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767
Query 164394 GTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAA 164453
|| || ||||| | || |||||| || | |||| || | || | || || ||
Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827
Query 164454 TCTTCGTGCTTACGATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGA 164513
|| ||||| ||||| || ||| |||||||| | ||||| |||||||||||||| ||
Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887
Query 164514 GACTTTCTATACCAAGAACA-TCTTATTGAACGAAGGACTCCGTGCATGGTTAGCACCAG 164572
|| ||||| || ||||| | |||| || |||||||| | ||||||||| | ||| |
Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTT-AACGAAGGTATTCGTGCATGGATGGCAGCTC 2946
Query 164573 TTGACCAGC--CAGGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAATGC 164630
|| |||| || || ||| |||| ||||| || || ||||| || | || || ||
Sbjct 2947 AAGATCAGCCTCATGAAAAC--CTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGC 3004
Query 164631 GCTTTAAT 164638
|||||||
Sbjct 3005 TCTTTAAT 3012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557583867573800
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