Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_015287.1
Length=232878
Score E
Sequences producing significant alignments: (Bits) Value
seq19 796 0.0
>seq19
Length=72585
Score = 796 bits (882), Expect = 0.0
Identities = 769/986 (78%), Gaps = 1/986 (0%)
Strand=Plus/Plus
Query 215286 GGGACGAGTTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTG 215345
|||||| |||||| ||| ||||||| ||||| || ||| | ||| | |||||||| |
Sbjct 10168 GGGACGT-TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCG 10226
Query 215346 GTGTCCTCATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCG 215405
| || | ||||| ||| | || |||| || | |||||||||||||| || |
Sbjct 10227 GAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTG 10286
Query 215406 CTGCACCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATG 215465
|||| |||||||| |||||||| || ||| | |||||||| |||| || | ||||| |
Sbjct 10287 CTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACG 10346
Query 215466 GTAACAACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCT 215525
| ||||||||||||||||||||||| | |||| || ||||| |||||| | |||||||
Sbjct 10347 GAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCT 10406
Query 215526 ACCCTATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAAC 215585
|||| |||||||||||||| | |||| || ||||| ||||| ||||| |||| ||| |
Sbjct 10407 ACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGC 10466
Query 215586 TGGTTATCTTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTT 215645
| | | | |||||| |||| || |||| | ||||| || | ||||||| ||||
Sbjct 10467 TTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTT 10526
Query 215646 CTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTG 215705
||| | | ||||| ||| | |||||||| ||| |||||||| || |||||| | || |
Sbjct 10527 CTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAG 10586
Query 215706 CCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCAC 215765
| || |||||| | || || ||| |||||||||||||||||||||||| ||||| |
Sbjct 10587 CAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTC 10646
Query 215766 TTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGA 215825
|||| || |||||||| ||||||| |||| | || |||||||||||||||||||| || |
Sbjct 10647 TTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTA 10706
Query 215826 TGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAA 215885
||||||||||||||||| | ||||| |||||||| |||||||||||| | ||||||||||
Sbjct 10707 TGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAA 10766
Query 215886 TGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGA 215945
||||||||||||| || || || ||||| ||| | ||||| |||||| | || ||| |
Sbjct 10767 TGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAA 10826
Query 215946 ACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTT 216005
|| || ||||||||||||||||| || || || |||||||||||||||||||||||||
Sbjct 10827 ACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTT 10886
Query 216006 ACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCT 216065
|||| || || || |||||||||||||| || |||||||||||| | || |||||||
Sbjct 10887 ACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCT 10946
Query 216066 TCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGG 216125
|||| ||| | || || || | |||||| || || |||||| | ||||||||||
Sbjct 10947 TCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGG 11006
Query 216126 CGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTA 216185
| |||||||||||||| |||||||||||||||||||| ||||| || || || |
Sbjct 11007 CTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAA 11066
Query 216186 TTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGC 216245
|| || ||||| || | | ||| | || || ||||||||||||||||||||||
Sbjct 11067 TTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGC 11126
Query 216246 GTAACGCTCACAACTTCCCATTAGAC 216271
|||||||||||||||||||| | |||
Sbjct 11127 GTAACGCTCACAACTTCCCACTTGAC 11152
Score = 796 bits (882), Expect = 0.0
Identities = 769/986 (78%), Gaps = 1/986 (0%)
Strand=Plus/Minus
Query 215286 GGGACGAGTTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTG 215345
|||||| |||||| ||| ||||||| ||||| || ||| | ||| | |||||||| |
Sbjct 36975 GGGACGT-TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCG 36917
Query 215346 GTGTCCTCATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCG 215405
| || | ||||| ||| | || |||| || | |||||||||||||| || |
Sbjct 36916 GAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTG 36857
Query 215406 CTGCACCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATG 215465
|||| |||||||| |||||||| || ||| | |||||||| |||| || | ||||| |
Sbjct 36856 CTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACG 36797
Query 215466 GTAACAACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCT 215525
| ||||||||||||||||||||||| | |||| || ||||| |||||| | |||||||
Sbjct 36796 GAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCT 36737
Query 215526 ACCCTATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAAC 215585
|||| |||||||||||||| | |||| || ||||| ||||| ||||| |||| ||| |
Sbjct 36736 ACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGC 36677
Query 215586 TGGTTATCTTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTT 215645
| | | | |||||| |||| || |||| | ||||| || | ||||||| ||||
Sbjct 36676 TTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTT 36617
Query 215646 CTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTG 215705
||| | | ||||| ||| | |||||||| ||| |||||||| || |||||| | || |
Sbjct 36616 CTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAG 36557
Query 215706 CCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCAC 215765
| || |||||| | || || ||| |||||||||||||||||||||||| ||||| |
Sbjct 36556 CAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTC 36497
Query 215766 TTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGA 215825
|||| || |||||||| ||||||| |||| | || |||||||||||||||||||| || |
Sbjct 36496 TTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTA 36437
Query 215826 TGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAA 215885
||||||||||||||||| | ||||| |||||||| |||||||||||| | ||||||||||
Sbjct 36436 TGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAA 36377
Query 215886 TGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGA 215945
||||||||||||| || || || ||||| ||| | ||||| |||||| | || ||| |
Sbjct 36376 TGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAA 36317
Query 215946 ACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTT 216005
|| || ||||||||||||||||| || || || |||||||||||||||||||||||||
Sbjct 36316 ACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTT 36257
Query 216006 ACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCT 216065
|||| || || || |||||||||||||| || |||||||||||| | || |||||||
Sbjct 36256 ACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCT 36197
Query 216066 TCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGG 216125
|||| ||| | || || || | |||||| || || |||||| | ||||||||||
Sbjct 36196 TCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGG 36137
Query 216126 CGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTA 216185
| |||||||||||||| |||||||||||||||||||| ||||| || || || |
Sbjct 36136 CTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAA 36077
Query 216186 TTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGC 216245
|| || ||||| || | | ||| | || || ||||||||||||||||||||||
Sbjct 36076 TTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGC 36017
Query 216246 GTAACGCTCACAACTTCCCATTAGAC 216271
|||||||||||||||||||| | |||
Sbjct 36016 GTAACGCTCACAACTTCCCACTTGAC 35991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 745081423043120
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