Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq19 737 0.0 >seq19 Length=72585 Score = 737 bits (816), Expect = 0.0 Identities = 757/981 (77%), Gaps = 14/981 (1%) Strand=Plus/Plus Query 164773 TGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCC 164832 ||| | ||||| || | ||||||||||| ||||||||||||| || | |||||||| Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 164833 TGTTTGCTCGCCGCTACAATTTGTTTTATTACT-GCATTCATCGCTGCTCCCCCTGTGGA 164891 ||| || | || || | || || | | ||||| || |||||||| ||||| || Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302 Query 164892 CATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTC 164951 || |||||||| ||||| || || | || || || |||||||| |||||||||||||| Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362 Query 164952 TGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGC 165011 ||||||||| | || | |||||||| ||||||||||||||||| || || |||||||| Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422 Query 165012 TGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTT 165071 || | | ||||| ||| | ||||||||||||||||||||| | | || | ||||| Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482 Query 165072 CCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTAT 165131 | ||||||| | || |||||||||||||||||||| || |||| ||| | || || Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542 Query 165132 GCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCT 165191 ||||||||||||| ||||| || || ||||| || || || | || || ||| | Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602 Query 165192 GGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTAC 165251 || || || ||||||| || |||||||||||| |||||||||||||| ||||| || Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662 Query 165252 TTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACAT 165311 ||| |||| ||| |||| ||||| || || || ||||| |||||||| || |||||||| Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722 Query 165312 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGT 165371 ||| || |||||||| ||||||||||| || ||||||||||| ||||| || || || Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782 Query 165372 TACTTCCTCACTCGTCCGCGAGACAACTGA-AACAGAGAGTCAG--AACTACGGTTATAA 165428 ||||| || ||| |||| ||||| ||||| ||| ||||| | ||| || || || Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAAC---GAGTCTGCAAACGCAGGATACAA 10839 Query 165429 GTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCT 165488 ||| ||||||||||||||||| || |||||||| ||||| ||||| |||||||| ||||| Sbjct 10840 GTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCT 10899 Query 165489 CATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATG 165548 || ||||||||||| || |||||||| || ||||| || ||||||||||||||| || Sbjct 10900 TATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTG 10959 Query 165549 GCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAA 165608 ||| ||| | || ||||||||||| ||| | ||| || || ||||| |||||||| || Sbjct 10960 GCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAA 11019 Query 165609 CGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAA---ATCATCCCTACTTG 165665 ||| |||||||||||||||||| | || ||| ||| ||| | | || || || Sbjct 11020 CGGATTCAACTTCAACCAGTCTGTAGTAGAT--TCA-AACGGACGTGTAATTAACACATG 11076 Query 165666 GGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCA 165725 |||||| | | ||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct 11077 GGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCA 11136 Query 165726 CAACTTCCCCCTCGACCTCGC 165746 ||||||||| || ||||| || Sbjct 11137 CAACTTCCCACTTGACCTTGC 11157 Score = 737 bits (816), Expect = 0.0 Identities = 757/981 (77%), Gaps = 14/981 (1%) Strand=Plus/Minus Query 164773 TGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTTATGATCCCC 164832 ||| | ||||| || | ||||||||||| ||||||||||||| || | |||||||| Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 164833 TGTTTGCTCGCCGCTACAATTTGTTTTATTACT-GCATTCATCGCTGCTCCCCCTGTGGA 164891 ||| || | || || | || || | | ||||| || |||||||| ||||| || Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841 Query 164892 CATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTAACAACATCATCTC 164951 || |||||||| ||||| || || | || || || |||||||| |||||||||||||| Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781 Query 164952 TGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATCCTATTTGGGAAGC 165011 ||||||||| | || | |||||||| ||||||||||||||||| || || |||||||| Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721 Query 165012 TGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAGTTGGTTGTCTTCCACTT 165071 || | | ||||| ||| | ||||||||||||||||||||| | | || | ||||| Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661 Query 165072 CCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCCTCGGTAT 165131 | ||||||| | || |||||||||||||||||||| || |||| ||| | || || Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601 Query 165132 GCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAGTTTTCCT 165191 ||||||||||||| ||||| || || ||||| || || || | || || ||| | Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541 Query 165192 GGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCTCTGGTAC 165251 || || || ||||||| || |||||||||||| |||||||||||||| ||||| || Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481 Query 165252 TTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGTTCCACAT 165311 ||| |||| ||| |||| ||||| || || || ||||| |||||||| || |||||||| Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421 Query 165312 GCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAAGTCTTGT 165371 ||| || |||||||| ||||||||||| || ||||||||||| ||||| || || || Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361 Query 165372 TACTTCCTCACTCGTCCGCGAGACAACTGA-AACAGAGAGTCAG--AACTACGGTTATAA 165428 ||||| || ||| |||| ||||| ||||| ||| ||||| | ||| || || || Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAAC---GAGTCTGCAAACGCAGGATACAA 36304 Query 165429 GTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTCGTCT 165488 ||| ||||||||||||||||| || |||||||| ||||| ||||| |||||||| ||||| Sbjct 36303 GTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCT 36244 Query 165489 CATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAGCATG 165548 || ||||||||||| || |||||||| || ||||| || ||||||||||||||| || Sbjct 36243 TATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTG 36184 Query 165549 GCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTGAA 165608 ||| ||| | || ||||||||||| ||| | ||| || || ||||| |||||||| || Sbjct 36183 GCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAA 36124 Query 165609 CGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAA---ATCATCCCTACTTG 165665 ||| |||||||||||||||||| | || ||| ||| ||| | | || || || Sbjct 36123 CGGATTCAACTTCAACCAGTCTGTAGTAGAT--TCA-AACGGACGTGTAATTAACACATG 36067 Query 165666 GGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTCA 165725 |||||| | | ||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct 36066 GGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCA 36007 Query 165726 CAACTTCCCCCTCGACCTCGC 165746 ||||||||| || ||||| || Sbjct 36006 CAACTTCCCACTTGACCTTGC 35986 Score = 563 bits (624), Expect = 1e-155 Identities = 741/1024 (72%), Gaps = 2/1024 (0%) Strand=Plus/Plus Query 166155 GGGTGGTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGG 166214 || ||||| || | | |||||||||||||| || ||||||||||| || || |||||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 166215 TCTGGACTTCTTCTTCTTCCCA-CTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGAC 166273 || ||| || || || |||||| ||| || |||| |||| || ||| | ||||| || Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 166274 TACTTTCGTCACGAGTTGGTATACTCATGGACTCGCAAGCAGTTATCTGGAGGGTGCAAA 166333 || ||||| || ||||| || || || | ||||| || || ||||| || Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 166334 CTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTTCT 166393 ||| ||||| ||||||| || || ||| | | ||||| ||| || || ||||| || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 166394 CTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGGGC 166453 ||||| || || || ||||| || ||| | ||||| || ||||| || | ||| | Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 166454 CTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAAT 166513 || || || || |||||||| || | |||| || || ||||| || || |||||||| Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 166514 CGCTCGTCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTGT 166573 || ||| |||| |||||||||||||| || || || || || | ||||| ||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 166574 CTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATC 166633 || || ||| || || || ||||| || || ||||| | ||||| || || || || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 166634 TTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGAC 166693 || || || | | ||| ||||| ||| | |||||| | ||||| |||||||||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 166694 ACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGC 166753 ||| |||||||| || |||||||| ||||| ||| | || || | ||| | |||| ||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 166754 CATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTT 166813 || || || | || ||||||||||| || | |||||||||| |||| ||||| Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647 Query 166814 CAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTA 166873 | ||||| || | ||||||| ||||| || || |||||||| ||||||||||| | Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707 Query 166874 TTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCT 166933 ||||| ||||| |||||| | || || ||| ||| | ||| | || ||||||||||| Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767 Query 166934 GTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAA 166993 || || ||||| | || | |||| | | ||| || | || | || || || Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827 Query 166994 CCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGA 167053 ||| ||||| || ||||| || || ||||| | | ||||| || |||||||||||||| Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887 Query 167054 AACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTAT 167113 ||| ||||| || ||||| ||||| | || || ||||| ||| | ||||||||| || Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947 Query 167114 CGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCT 167173 ||||| |||||||| | | ||||||||||| ||||| ||||| | || |||||||| Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007 Query 167174 CTAA 167177 ||| Sbjct 3008 TTAA 3011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563660666130560