Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq19 719 0.0 >seq19 Length=72585 Score = 719 bits (796), Expect = 0.0 Identities = 727/946 (77%), Gaps = 0/946 (0%) Strand=Plus/Plus Query 169732 GGTTGGTTCGGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTT 169791 ||||||||||| || || |||||||| | || | ||||| | | || ||||| Sbjct 10217 GGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTA 10276 Query 169792 GCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCA 169851 || || || || ||||| ||||| || |||||||| ||| | || || ||| | || ||| Sbjct 10277 GCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCA 10336 Query 169852 TTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGT 169911 | ||||| || |||||||||||||||||||| || | || | || ||||| ||||| Sbjct 10337 CTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGA 10396 Query 169912 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGT 169971 || |||||||| || || ||||||||||| |||| ||||||||| | || ||||||||| Sbjct 10397 CTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGT 10456 Query 169972 CCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAG 170031 ||||| || | | | | |||||| | |||||||| | | | ||||||||| | || Sbjct 10457 CCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAG 10516 Query 170032 TGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCA 170091 ||||| || || | ||||||||| |||||||||||||| |||||| || |||||||| Sbjct 10517 TGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCT 10576 Query 170092 GTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGAC 170151 || |||||||| ||||||||| | || || || |||||||||| |||||||| || Sbjct 10577 GTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGAT 10636 Query 170152 GGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCAC 170211 ||||||||||| ||||| || || || || ||||||||| |||||||||| || |||||| Sbjct 10637 GGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCAC 10696 Query 170212 AACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTC 170271 ||||| ||||||||||||||||| ||| || ||||||||| | ||||| || |||| Sbjct 10697 AACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTT 10756 Query 170272 TTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAAC 170331 ||||| ||||||||||||||||| ||||| || ||||| ||| | ||||| || || ||| Sbjct 10757 TTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAAC 10816 Query 170332 GAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCA 170391 ||||| ||| |||||||| ||||||||||||||||| || |||||||| || || Sbjct 10817 GAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCT 10876 Query 170392 GCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGT 170451 ||||| || ||||| || | |||||||||||||| ||| || ||||| ||| Sbjct 10877 GCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCA 10936 Query 170452 CTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATT 170511 || ||||||||||| || | | || ||| | | |||||||| || | ||||||||| Sbjct 10937 CTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATT 10996 Query 170512 TGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCT 170571 | || ||||| || |||||||| ||||| |||||||||||||| | |||||| | Sbjct 10997 TCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAAC 11056 Query 170572 GGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTA 170631 || ||| || |||||||| || | | ||| | || ||||| |||||||||||| Sbjct 11057 GGACGTGTAATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTA 11116 Query 170632 ATGCATGAGCGTAATGCACACAACTTCCCACTTGACTTGGCAACTG 170677 ||||| |||||||| || |||||||||||||||||| | ||| ||| Sbjct 11117 ATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTTGCATCTG 11162 Score = 719 bits (796), Expect = 0.0 Identities = 727/946 (77%), Gaps = 0/946 (0%) Strand=Plus/Minus Query 169732 GGTTGGTTCGGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTT 169791 ||||||||||| || || |||||||| | || | ||||| | | || ||||| Sbjct 36926 GGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTA 36867 Query 169792 GCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCA 169851 || || || || ||||| ||||| || |||||||| ||| | || || ||| | || ||| Sbjct 36866 GCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCA 36807 Query 169852 TTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGT 169911 | ||||| || |||||||||||||||||||| || | || | || ||||| ||||| Sbjct 36806 CTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGA 36747 Query 169912 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGT 169971 || |||||||| || || ||||||||||| |||| ||||||||| | || ||||||||| Sbjct 36746 CTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGT 36687 Query 169972 CCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAG 170031 ||||| || | | | | |||||| | |||||||| | | | ||||||||| | || Sbjct 36686 CCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAG 36627 Query 170032 TGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCA 170091 ||||| || || | ||||||||| |||||||||||||| |||||| || |||||||| Sbjct 36626 TGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCT 36567 Query 170092 GTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGAC 170151 || |||||||| ||||||||| | || || || |||||||||| |||||||| || Sbjct 36566 GTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGAT 36507 Query 170152 GGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCAC 170211 ||||||||||| ||||| || || || || ||||||||| |||||||||| || |||||| Sbjct 36506 GGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCAC 36447 Query 170212 AACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTC 170271 ||||| ||||||||||||||||| ||| || ||||||||| | ||||| || |||| Sbjct 36446 AACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTT 36387 Query 170272 TTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAAC 170331 ||||| ||||||||||||||||| ||||| || ||||| ||| | ||||| || || ||| Sbjct 36386 TTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAAC 36327 Query 170332 GAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCA 170391 ||||| ||| |||||||| ||||||||||||||||| || |||||||| || || Sbjct 36326 GAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCT 36267 Query 170392 GCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGT 170451 ||||| || ||||| || | |||||||||||||| ||| || ||||| ||| Sbjct 36266 GCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCA 36207 Query 170452 CTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATT 170511 || ||||||||||| || | | || ||| | | |||||||| || | ||||||||| Sbjct 36206 CTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATT 36147 Query 170512 TGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCT 170571 | || ||||| || |||||||| ||||| |||||||||||||| | |||||| | Sbjct 36146 TCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAAC 36087 Query 170572 GGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTA 170631 || ||| || |||||||| || | | ||| | || ||||| |||||||||||| Sbjct 36086 GGACGTGTAATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTA 36027 Query 170632 ATGCATGAGCGTAATGCACACAACTTCCCACTTGACTTGGCAACTG 170677 ||||| |||||||| || |||||||||||||||||| | ||| ||| Sbjct 36026 ATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTTGCATCTG 35981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582847861573600