Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_015290.1
Length=182180
Score E
Sequences producing significant alignments: (Bits) Value
seq19 719 0.0
>seq19
Length=72585
Score = 719 bits (796), Expect = 0.0
Identities = 727/946 (77%), Gaps = 0/946 (0%)
Strand=Plus/Plus
Query 169732 GGTTGGTTCGGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTT 169791
||||||||||| || || |||||||| | || | ||||| | | || |||||
Sbjct 10217 GGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTA 10276
Query 169792 GCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCA 169851
|| || || || ||||| ||||| || |||||||| ||| | || || ||| | || |||
Sbjct 10277 GCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCA 10336
Query 169852 TTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGT 169911
| ||||| || |||||||||||||||||||| || | || | || ||||| |||||
Sbjct 10337 CTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGA 10396
Query 169912 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGT 169971
|| |||||||| || || ||||||||||| |||| ||||||||| | || |||||||||
Sbjct 10397 CTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGT 10456
Query 169972 CCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAG 170031
||||| || | | | | |||||| | |||||||| | | | ||||||||| | ||
Sbjct 10457 CCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAG 10516
Query 170032 TGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCA 170091
||||| || || | ||||||||| |||||||||||||| |||||| || ||||||||
Sbjct 10517 TGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCT 10576
Query 170092 GTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGAC 170151
|| |||||||| ||||||||| | || || || |||||||||| |||||||| ||
Sbjct 10577 GTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGAT 10636
Query 170152 GGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCAC 170211
||||||||||| ||||| || || || || ||||||||| |||||||||| || ||||||
Sbjct 10637 GGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCAC 10696
Query 170212 AACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTC 170271
||||| ||||||||||||||||| ||| || ||||||||| | ||||| || ||||
Sbjct 10697 AACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTT 10756
Query 170272 TTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAAC 170331
||||| ||||||||||||||||| ||||| || ||||| ||| | ||||| || || |||
Sbjct 10757 TTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAAC 10816
Query 170332 GAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCA 170391
||||| ||| |||||||| ||||||||||||||||| || |||||||| || ||
Sbjct 10817 GAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCT 10876
Query 170392 GCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGT 170451
||||| || ||||| || | |||||||||||||| ||| || ||||| |||
Sbjct 10877 GCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCA 10936
Query 170452 CTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATT 170511
|| ||||||||||| || | | || ||| | | |||||||| || | |||||||||
Sbjct 10937 CTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATT 10996
Query 170512 TGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCT 170571
| || ||||| || |||||||| ||||| |||||||||||||| | |||||| |
Sbjct 10997 TCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAAC 11056
Query 170572 GGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTA 170631
|| ||| || |||||||| || | | ||| | || ||||| ||||||||||||
Sbjct 11057 GGACGTGTAATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTA 11116
Query 170632 ATGCATGAGCGTAATGCACACAACTTCCCACTTGACTTGGCAACTG 170677
||||| |||||||| || |||||||||||||||||| | ||| |||
Sbjct 11117 ATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTTGCATCTG 11162
Score = 719 bits (796), Expect = 0.0
Identities = 727/946 (77%), Gaps = 0/946 (0%)
Strand=Plus/Minus
Query 169732 GGTTGGTTCGGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAACCTGCTTTATCGTT 169791
||||||||||| || || |||||||| | || | ||||| | | || |||||
Sbjct 36926 GGTTGGTTCGGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTA 36867
Query 169792 GCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCA 169851
|| || || || ||||| ||||| || |||||||| ||| | || || ||| | || |||
Sbjct 36866 GCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCA 36807
Query 169852 TTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGT 169911
| ||||| || |||||||||||||||||||| || | || | || ||||| |||||
Sbjct 36806 CTTATGTACGGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGA 36747
Query 169912 CTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTGGT 169971
|| |||||||| || || ||||||||||| |||| ||||||||| | || |||||||||
Sbjct 36746 CTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGT 36687
Query 169972 CCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACAG 170031
||||| || | | | | |||||| | |||||||| | | | ||||||||| | ||
Sbjct 36686 CCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAG 36627
Query 170032 TGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCA 170091
||||| || || | ||||||||| |||||||||||||| |||||| || ||||||||
Sbjct 36626 TGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCT 36567
Query 170092 GTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGAC 170151
|| |||||||| ||||||||| | || || || |||||||||| |||||||| ||
Sbjct 36566 GTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGAT 36507
Query 170152 GGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCAC 170211
||||||||||| ||||| || || || || ||||||||| |||||||||| || ||||||
Sbjct 36506 GGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCAC 36447
Query 170212 AACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTC 170271
||||| ||||||||||||||||| ||| || ||||||||| | ||||| || ||||
Sbjct 36446 AACATCCTTATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTT 36387
Query 170272 TTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAGACAACAGATAAC 170331
||||| ||||||||||||||||| ||||| || ||||| ||| | ||||| || || |||
Sbjct 36386 TTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAAC 36327
Query 170332 GAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGTTGCA 170391
||||| ||| |||||||| ||||||||||||||||| || |||||||| || ||
Sbjct 36326 GAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCT 36267
Query 170392 GCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGT 170451
||||| || ||||| || | |||||||||||||| ||| || ||||| |||
Sbjct 36266 GCACACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCA 36207
Query 170452 CTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATT 170511
|| ||||||||||| || | | || ||| | | |||||||| || | |||||||||
Sbjct 36206 CTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATT 36147
Query 170512 TGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCT 170571
| || ||||| || |||||||| ||||| |||||||||||||| | |||||| |
Sbjct 36146 TCAACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAAC 36087
Query 170572 GGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTA 170631
|| ||| || |||||||| || | | ||| | || ||||| ||||||||||||
Sbjct 36086 GGACGTGTAATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTA 36027
Query 170632 ATGCATGAGCGTAATGCACACAACTTCCCACTTGACTTGGCAACTG 170677
||||| |||||||| || |||||||||||||||||| | ||| |||
Sbjct 36026 ATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTTGCATCTG 35981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582847861573600
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