Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq19 704 0.0 >seq19 Length=72585 Score = 704 bits (780), Expect = 0.0 Identities = 751/985 (76%), Gaps = 10/985 (1%) Strand=Plus/Minus Query 83967 ACTGACGCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCA 84026 || || ||||| || | |||||||| || |||||||| |||||||| ||||||||||| Sbjct 11163 ACAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCG 11104 Query 84027 AGCCCGGCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGT--TTTGGCTATCGA 84084 || ||||| || | | ||| ||||| || || | ||||| |||| ||| | Sbjct 11103 AGGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGA--ATCTA 11046 Query 84085 CAAGACTCTGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAG 84144 | | | ||| |||||||| ||||| || || || || ||||| || || ||||| || Sbjct 11045 CTACAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAG 10986 Query 84145 CAGCAAACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTAT 84204 | | ||||| || || | |||||||| || | ||| |||||||| ||||| | Sbjct 10985 CTGTGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGT 10926 Query 84205 TGTTGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATAT 84264 ||||||| ||||| || |||||||||||||| |||||||| ||||| ||||| || || | Sbjct 10925 TGTTGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGT 10866 Query 84265 TATAAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAG 84324 | ||||| || |||||||| ||||||||||| || |||| || | || || |||| Sbjct 10865 TGTAAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAG 10806 Query 84325 TTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCAC 84384 | || ||||| ||||| ||||| || |||||||| |||||||||||||| || | |||| Sbjct 10805 TCTCACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCAC 10746 Query 84385 CGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCT 84444 |||||||||||||||| || | |||||| || || |||||||||||||| || || |||| Sbjct 10745 CGAATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCT 10686 Query 84445 GGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAG 84504 |||| || | |||| ||||||| ||||| || |||||||| ||||| ||||||||||||| Sbjct 10685 GGAATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAG 10626 Query 84505 AACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGT 84564 |||| || |||| || || || | ||||||||| | ||| ||||| || |||||||||| Sbjct 10625 AACCCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGT 10566 Query 84565 AAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCA 84624 |||| ||| ||||| |||||||| || | ||| | ||||| ||||| |||||||||| Sbjct 10565 AAGCTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCA 10506 Query 84625 TGTAAG--CAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATT 84682 |||| | ||||| | | || | ||||||| | || | ||| || ||||| ||||| || Sbjct 10505 TGTATGAACAAATTC--CGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTT 10448 Query 84683 ATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGC 84742 || ||||| || || | | ||||||||||| || || ||||| || || || ||||| Sbjct 10447 GTAAAGCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGC 10388 Query 84743 ATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGC 84802 ||||| | || | ||| |||||||| |||||||||||||||||||| || || |||| Sbjct 10387 GTTAGATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGA 10328 Query 84803 GACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA 84862 ||||||||||||||||| || ||||| || || || ||| ||| ||||| | |||||| Sbjct 10327 TACTGGCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAA 10268 Query 84863 -ACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGA 84921 || || ||| || | ||||| ||| || ||||| | ||| |||||||| | || | Sbjct 10267 TACTGA-AGTTGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAA 10209 Query 84922 TACGGTTGTTAGTGGAGGTGACCCA 84946 |||||| | ||| || || | ||| Sbjct 10208 GACGGTTCTCAGTTGAAGTAATCCA 10184 Score = 704 bits (780), Expect = 0.0 Identities = 751/985 (76%), Gaps = 10/985 (1%) Strand=Plus/Plus Query 83967 ACTGACGCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCA 84026 || || ||||| || | |||||||| || |||||||| |||||||| ||||||||||| Sbjct 35980 ACAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCG 36039 Query 84027 AGCCCGGCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGT--TTTGGCTATCGA 84084 || ||||| || | | ||| ||||| || || | ||||| |||| ||| | Sbjct 36040 AGGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGA--ATCTA 36097 Query 84085 CAAGACTCTGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAG 84144 | | | ||| |||||||| ||||| || || || || ||||| || || ||||| || Sbjct 36098 CTACAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAG 36157 Query 84145 CAGCAAACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTAT 84204 | | ||||| || || | |||||||| || | ||| |||||||| ||||| | Sbjct 36158 CTGTGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGT 36217 Query 84205 TGTTGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATAT 84264 ||||||| ||||| || |||||||||||||| |||||||| ||||| ||||| || || | Sbjct 36218 TGTTGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGT 36277 Query 84265 TATAAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAG 84324 | ||||| || |||||||| ||||||||||| || |||| || | || || |||| Sbjct 36278 TGTAAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAG 36337 Query 84325 TTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCAC 84384 | || ||||| ||||| ||||| || |||||||| |||||||||||||| || | |||| Sbjct 36338 TCTCACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCAC 36397 Query 84385 CGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCT 84444 |||||||||||||||| || | |||||| || || |||||||||||||| || || |||| Sbjct 36398 CGAATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCT 36457 Query 84445 GGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAG 84504 |||| || | |||| ||||||| ||||| || |||||||| ||||| ||||||||||||| Sbjct 36458 GGAATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAG 36517 Query 84505 AACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGT 84564 |||| || |||| || || || | ||||||||| | ||| ||||| || |||||||||| Sbjct 36518 AACCCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGT 36577 Query 84565 AAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCA 84624 |||| ||| ||||| |||||||| || | ||| | ||||| ||||| |||||||||| Sbjct 36578 AAGCTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCA 36637 Query 84625 TGTA--AGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATT 84682 |||| | ||||| || || | ||||||| | || | ||| || ||||| ||||| || Sbjct 36638 TGTATGAACAAAT--TCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTT 36695 Query 84683 ATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGC 84742 || ||||| || || | | ||||||||||| || || ||||| || || || ||||| Sbjct 36696 GTAAAGCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGC 36755 Query 84743 ATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGC 84802 ||||| | || | ||| |||||||| |||||||||||||||||||| || || |||| Sbjct 36756 GTTAGATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGA 36815 Query 84803 GACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA 84862 ||||||||||||||||| || ||||| || || || ||| ||| ||||| | |||||| Sbjct 36816 TACTGGCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAA 36875 Query 84863 -ACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGA 84921 || || ||| || | ||||| ||| || ||||| | ||| |||||||| | || | Sbjct 36876 TACTGA-AGTTGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAA 36934 Query 84922 TACGGTTGTTAGTGGAGGTGACCCA 84946 |||||| | ||| || || | ||| Sbjct 36935 GACGGTTCTCAGTTGAAGTAATCCA 36959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571273464322520