Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_015569.1
Length=178563
Score E
Sequences producing significant alignments: (Bits) Value
seq19 704 0.0
>seq19
Length=72585
Score = 704 bits (780), Expect = 0.0
Identities = 751/985 (76%), Gaps = 10/985 (1%)
Strand=Plus/Minus
Query 83967 ACTGACGCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCA 84026
|| || ||||| || | |||||||| || |||||||| |||||||| |||||||||||
Sbjct 11163 ACAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCG 11104
Query 84027 AGCCCGGCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGT--TTTGGCTATCGA 84084
|| ||||| || | | ||| ||||| || || | ||||| |||| ||| |
Sbjct 11103 AGGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGA--ATCTA 11046
Query 84085 CAAGACTCTGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAG 84144
| | | ||| |||||||| ||||| || || || || ||||| || || ||||| ||
Sbjct 11045 CTACAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAG 10986
Query 84145 CAGCAAACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTAT 84204
| | ||||| || || | |||||||| || | ||| |||||||| ||||| |
Sbjct 10985 CTGTGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGT 10926
Query 84205 TGTTGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATAT 84264
||||||| ||||| || |||||||||||||| |||||||| ||||| ||||| || || |
Sbjct 10925 TGTTGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGT 10866
Query 84265 TATAAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAG 84324
| ||||| || |||||||| ||||||||||| || |||| || | || || ||||
Sbjct 10865 TGTAAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAG 10806
Query 84325 TTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCAC 84384
| || ||||| ||||| ||||| || |||||||| |||||||||||||| || | ||||
Sbjct 10805 TCTCACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCAC 10746
Query 84385 CGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCT 84444
|||||||||||||||| || | |||||| || || |||||||||||||| || || ||||
Sbjct 10745 CGAATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCT 10686
Query 84445 GGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAG 84504
|||| || | |||| ||||||| ||||| || |||||||| ||||| |||||||||||||
Sbjct 10685 GGAATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAG 10626
Query 84505 AACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGT 84564
|||| || |||| || || || | ||||||||| | ||| ||||| || ||||||||||
Sbjct 10625 AACCCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGT 10566
Query 84565 AAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCA 84624
|||| ||| ||||| |||||||| || | ||| | ||||| ||||| ||||||||||
Sbjct 10565 AAGCTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCA 10506
Query 84625 TGTAAG--CAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATT 84682
|||| | ||||| | | || | ||||||| | || | ||| || ||||| ||||| ||
Sbjct 10505 TGTATGAACAAATTC--CGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTT 10448
Query 84683 ATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGC 84742
|| ||||| || || | | ||||||||||| || || ||||| || || || |||||
Sbjct 10447 GTAAAGCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGC 10388
Query 84743 ATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGC 84802
||||| | || | ||| |||||||| |||||||||||||||||||| || || ||||
Sbjct 10387 GTTAGATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGA 10328
Query 84803 GACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA 84862
||||||||||||||||| || ||||| || || || ||| ||| ||||| | ||||||
Sbjct 10327 TACTGGCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAA 10268
Query 84863 -ACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGA 84921
|| || ||| || | ||||| ||| || ||||| | ||| |||||||| | || |
Sbjct 10267 TACTGA-AGTTGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAA 10209
Query 84922 TACGGTTGTTAGTGGAGGTGACCCA 84946
|||||| | ||| || || | |||
Sbjct 10208 GACGGTTCTCAGTTGAAGTAATCCA 10184
Score = 704 bits (780), Expect = 0.0
Identities = 751/985 (76%), Gaps = 10/985 (1%)
Strand=Plus/Plus
Query 83967 ACTGACGCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCA 84026
|| || ||||| || | |||||||| || |||||||| |||||||| |||||||||||
Sbjct 35980 ACAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCG 36039
Query 84027 AGCCCGGCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGT--TTTGGCTATCGA 84084
|| ||||| || | | ||| ||||| || || | ||||| |||| ||| |
Sbjct 36040 AGGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGA--ATCTA 36097
Query 84085 CAAGACTCTGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAG 84144
| | | ||| |||||||| ||||| || || || || ||||| || || ||||| ||
Sbjct 36098 CTACAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAG 36157
Query 84145 CAGCAAACCAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTAT 84204
| | ||||| || || | |||||||| || | ||| |||||||| ||||| |
Sbjct 36158 CTGTGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGT 36217
Query 84205 TGTTGAAGGAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATAT 84264
||||||| ||||| || |||||||||||||| |||||||| ||||| ||||| || || |
Sbjct 36218 TGTTGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGT 36277
Query 84265 TATAAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAG 84324
| ||||| || |||||||| ||||||||||| || |||| || | || || ||||
Sbjct 36278 TGTAAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAG 36337
Query 84325 TTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCAC 84384
| || ||||| ||||| ||||| || |||||||| |||||||||||||| || | ||||
Sbjct 36338 TCTCACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCAC 36397
Query 84385 CGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCT 84444
|||||||||||||||| || | |||||| || || |||||||||||||| || || ||||
Sbjct 36398 CGAATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCT 36457
Query 84445 GGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAG 84504
|||| || | |||| ||||||| ||||| || |||||||| ||||| |||||||||||||
Sbjct 36458 GGAATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAG 36517
Query 84505 AACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGT 84564
|||| || |||| || || || | ||||||||| | ||| ||||| || ||||||||||
Sbjct 36518 AACCCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGT 36577
Query 84565 AAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCA 84624
|||| ||| ||||| |||||||| || | ||| | ||||| ||||| ||||||||||
Sbjct 36578 AAGCTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCA 36637
Query 84625 TGTA--AGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATT 84682
|||| | ||||| || || | ||||||| | || | ||| || ||||| ||||| ||
Sbjct 36638 TGTATGAACAAAT--TCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTT 36695
Query 84683 ATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGC 84742
|| ||||| || || | | ||||||||||| || || ||||| || || || |||||
Sbjct 36696 GTAAAGCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGC 36755
Query 84743 ATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGC 84802
||||| | || | ||| |||||||| |||||||||||||||||||| || || ||||
Sbjct 36756 GTTAGATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGA 36815
Query 84803 GACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA 84862
||||||||||||||||| || ||||| || || || ||| ||| ||||| | ||||||
Sbjct 36816 TACTGGCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAA 36875
Query 84863 -ACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGA 84921
|| || ||| || | ||||| ||| || ||||| | ||| |||||||| | || |
Sbjct 36876 TACTGA-AGTTGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAA 36934
Query 84922 TACGGTTGTTAGTGGAGGTGACCCA 84946
|||||| | ||| || || | |||
Sbjct 36935 GACGGTTCTCAGTTGAAGTAATCCA 36959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571273464322520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |