Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq19 536 4e-148 >seq19 Length=72585 Score = 536 bits (594), Expect = 4e-148 Identities = 716/989 (72%), Gaps = 6/989 (1%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 |||||| ||| |||| |||||||||||||| || | || |||||||| || | Sbjct 10175 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 10234 Query 25862 ATGATACCCTGCTT-ACTCGCAGCCACTACATGTTTTATACTTGCCTTCATCGCAGCACC 25920 ||||| |||| ||| ||| |||| ||| || || || | || || || || || || Sbjct 10235 ATGAT-CCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCC 10293 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 ||||||||||| ||||| || ||||||||||| || || || | |||||||||||||| Sbjct 10294 TCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAA 10353 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 || || || || || || |||| | |||||||| |||||||| || || ||||| || Sbjct 10354 CATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAAT 10413 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 ||||||||| | | || || |||||||| ||||| || || || || || || || | Sbjct 10414 CTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGT 10473 Query 26101 CTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAG 26160 | |||||||| || ||| | |||| || | ||||||| || |||| | | Sbjct 10474 ATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCG 10533 Query 26161 ACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGC 26220 |||||||| | || ||||| ||| || || | || || || | ||||| || Sbjct 10534 TTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGC 10593 Query 26221 AGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTAT 26280 || ||| | || || || |||| || || ||| ||||||||||||||||||||| Sbjct 10594 TGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTAT 10653 Query 26281 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCC 26340 ||||| ||||| ||||| ||| |||||||||| || || || || || || |||||||| Sbjct 10654 TTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 10713 Query 26341 ATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGG 26400 |||||| ||| |||||||||||| || |||||||| | |||||| |||| |||||||| Sbjct 10714 ATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGG 10773 Query 26401 AAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGA--AGTCTCACAGAATTAT 26458 | || ||||| || || || || || || ||| | ||||| || | | Sbjct 10774 TTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTG-CAAACGCA- 10831 Query 26459 GGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTT 26518 || || ||||| || ||||| |||||||| || || || || ||||||||||| ||||| Sbjct 10832 GGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTC 10891 Query 26519 GGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTT 26578 || | | || || || || || || || ||| ||||| || || ||||| || Sbjct 10892 GGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTC 10951 Query 26579 GCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTT 26638 || | ||||| || | || || ||| | ||| |||||||||| | || ||||| || Sbjct 10952 GCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTC 11011 Query 26639 AACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCT 26698 ||||| || || || ||||| |||||||| ||||||||| || ||| |||| Sbjct 11012 AACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAAC 11071 Query 26699 ACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAAT 26758 |||||||||||| | ||||||| ||||||||||| | ||||| |||||||||||||| Sbjct 11072 ACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAAC 11131 Query 26759 GCTCATAACTTTCCACTTGACTTAGCATC 26787 ||||| ||||| ||||||||| | ||||| Sbjct 11132 GCTCACAACTTCCCACTTGACCTTGCATC 11160 Score = 536 bits (594), Expect = 4e-148 Identities = 716/989 (72%), Gaps = 6/989 (1%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 |||||| ||| |||| |||||||||||||| || | || |||||||| || | Sbjct 36968 TTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTA 36909 Query 25862 ATGATACCCTGCTT-ACTCGCAGCCACTACATGTTTTATACTTGCCTTCATCGCAGCACC 25920 ||||| |||| ||| ||| |||| ||| || || || | || || || || || || Sbjct 36908 ATGAT-CCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCC 36850 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 ||||||||||| ||||| || ||||||||||| || || || | |||||||||||||| Sbjct 36849 TCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAA 36790 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 || || || || || || |||| | |||||||| |||||||| || || ||||| || Sbjct 36789 CATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAAT 36730 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 ||||||||| | | || || |||||||| ||||| || || || || || || || | Sbjct 36729 CTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGT 36670 Query 26101 CTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAG 26160 | |||||||| || ||| | |||| || | ||||||| || |||| | | Sbjct 36669 ATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCG 36610 Query 26161 ACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGC 26220 |||||||| | || ||||| ||| || || | || || || | ||||| || Sbjct 36609 TTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGC 36550 Query 26221 AGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTAT 26280 || ||| | || || || |||| || || ||| ||||||||||||||||||||| Sbjct 36549 TGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTAT 36490 Query 26281 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCC 26340 ||||| ||||| ||||| ||| |||||||||| || || || || || || |||||||| Sbjct 36489 TTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 36430 Query 26341 ATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGG 26400 |||||| ||| |||||||||||| || |||||||| | |||||| |||| |||||||| Sbjct 36429 ATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGG 36370 Query 26401 AAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGA--AGTCTCACAGAATTAT 26458 | || ||||| || || || || || || ||| | ||||| || | | Sbjct 36369 TTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTG-CAAACGCA- 36312 Query 26459 GGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTT 26518 || || ||||| || ||||| |||||||| || || || || ||||||||||| ||||| Sbjct 36311 GGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTC 36252 Query 26519 GGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTT 26578 || | | || || || || || || || ||| ||||| || || ||||| || Sbjct 36251 GGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTC 36192 Query 26579 GCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTT 26638 || | ||||| || | || || ||| | ||| |||||||||| | || ||||| || Sbjct 36191 GCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTC 36132 Query 26639 AACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCT 26698 ||||| || || || ||||| |||||||| ||||||||| || ||| |||| Sbjct 36131 AACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAAC 36072 Query 26699 ACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAAT 26758 |||||||||||| | ||||||| ||||||||||| | ||||| |||||||||||||| Sbjct 36071 ACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAAC 36012 Query 26759 GCTCATAACTTTCCACTTGACTTAGCATC 26787 ||||| ||||| ||||||||| | ||||| Sbjct 36011 GCTCACAACTTCCCACTTGACCTTGCATC 35983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146726366894856