Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq19 625 9e-175 >seq19 Length=72585 Score = 625 bits (692), Expect = 9e-175 Identities = 739/999 (74%), Gaps = 4/999 (0%) Strand=Plus/Minus Query 25448 CAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTA 25507 ||||||| | |||||| ||||||||||| ||||||||||| ||||| |||||||| || | Sbjct 11162 CAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGA 11103 Query 25508 AGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGA 25567 || |||||||| | || |||||||| || | || | |||||| ||||| || | Sbjct 11102 GGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTA 11043 Query 25568 CTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGG 25627 | ||||| |||||||| || ||||| || || ||||||||||| || | |||||||| | Sbjct 11042 CAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTG 10983 Query 25628 TAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTAT 25687 | | ||| || | | || ||||| || |||||||| || | ||| || | Sbjct 10982 TGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 10923 Query 25688 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 25747 | || ||| || |||||||| || | || ||||| || || || || || ||||| | Sbjct 10922 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGT 10863 Query 25748 ACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTT 25807 | |||||||||||||| ||||| || ||||| ||| ||| || | |||| || | Sbjct 10862 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCT 10803 Query 25808 CACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGA 25867 |||| || || || ||||| || || |||||||| |||| ||| | | ||||||| Sbjct 10802 CACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGA 10743 Query 25868 ATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAA 25927 |||| || |||||||| ||||| ||||| || ||||||||||| ||||| || ||||| | Sbjct 10742 ATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 10683 Query 25928 AGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCC 25987 | || | ||| || |||||||| || ||||||||||||||||| |||||||||||| | Sbjct 10682 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAAC 10623 Query 25988 CTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAG 26047 | || || | ||||| || | ||||||||| ||||||||| ||||| || || |||| Sbjct 10622 CCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAG 10563 Query 26048 CTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGT 26107 ||||| ||||| || | ||| |||| | || ||| ||||| | || |||| || Sbjct 10562 CTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGT 10503 Query 26108 AAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACA 26167 | | | || ||||||| ||||| | || ||||| || || || |||||||| || | Sbjct 10502 ATGAACAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAA 10443 Query 26168 ACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAG 26227 |||||| || || | || |||||||||||||||||||||||||| ||||| ||||||| Sbjct 10442 GCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAG 10383 Query 26228 ATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAG 26287 ||| |||| | || || ||||||||||||||||| || | | || ||| || || | Sbjct 10382 ATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTG 10323 Query 26288 GCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTG 26347 ||||||| |||||||| ||||| || ||||| ||||||| |||||| | | ||| ||| Sbjct 10322 GCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTG 10263 Query 26348 TCACTGCTGTTA--AAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCG 26405 |||||| | ||||| ||||||||||| ||| || ||||| || | || || || Sbjct 10262 AAGTTGCTGTAAGTAAAGT--AGGGATCATTAATACTCCGAACCAACCGATGTAAAGACG 10205 Query 26406 GTTGTTTGTACTTGTAACCCAGTCACATAAACTTTCCCA 26444 ||| | || |||| ||| ||| |||| | |||| Sbjct 10204 GTTCTCAGTTGAAGTAATCCATGAACAAAAACGTCCCCA 10166 Score = 625 bits (692), Expect = 9e-175 Identities = 739/999 (74%), Gaps = 4/999 (0%) Strand=Plus/Plus Query 25448 CAGATGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTA 25507 ||||||| | |||||| ||||||||||| ||||||||||| ||||| |||||||| || | Sbjct 35981 CAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGA 36040 Query 25508 AGTCGGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGA 25567 || |||||||| | || |||||||| || | || | |||||| ||||| || | Sbjct 36041 GGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTA 36100 Query 25568 CTGACTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGG 25627 | ||||| |||||||| || ||||| || || ||||||||||| || | |||||||| | Sbjct 36101 CAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTG 36160 Query 25628 TAAGCCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTAT 25687 | | ||| || | | || ||||| || |||||||| || | ||| || | Sbjct 36161 TGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 36220 Query 25688 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 25747 | || ||| || |||||||| || | || ||||| || || || || || ||||| | Sbjct 36221 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGT 36280 Query 25748 ACGTCTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTT 25807 | |||||||||||||| ||||| || ||||| ||| ||| || | |||| || | Sbjct 36281 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCT 36340 Query 25808 CACGAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGA 25867 |||| || || || ||||| || || |||||||| |||| ||| | | ||||||| Sbjct 36341 CACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGA 36400 Query 25868 ATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAA 25927 |||| || |||||||| ||||| ||||| || ||||||||||| ||||| || ||||| | Sbjct 36401 ATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 36460 Query 25928 AGACAAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCC 25987 | || | ||| || |||||||| || ||||||||||||||||| |||||||||||| | Sbjct 36461 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAAC 36520 Query 25988 CTTGTCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAG 26047 | || || | ||||| || | ||||||||| ||||||||| ||||| || || |||| Sbjct 36521 CCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAG 36580 Query 26048 CTACACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGT 26107 ||||| ||||| || | ||| |||| | || ||| ||||| | || |||| || Sbjct 36581 CTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGT 36640 Query 26108 AAGCTGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACA 26167 | | | || ||||||| ||||| | || ||||| || || || |||||||| || | Sbjct 36641 ATGAACAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAA 36700 Query 26168 ACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAG 26227 |||||| || || | || |||||||||||||||||||||||||| ||||| ||||||| Sbjct 36701 GCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAG 36760 Query 26228 ATGACGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAG 26287 ||| |||| | || || ||||||||||||||||| || | | || ||| || || | Sbjct 36761 ATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTG 36820 Query 26288 GCTCACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTG 26347 ||||||| |||||||| ||||| || ||||| ||||||| |||||| | | ||| ||| Sbjct 36821 GCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTG 36880 Query 26348 TCACTGCTGTTA--AAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCG 26405 |||||| | ||||| ||||||||||| ||| || ||||| || | || || || Sbjct 36881 AAGTTGCTGTAAGTAAAGT--AGGGATCATTAATACTCCGAACCAACCGATGTAAAGACG 36938 Query 26406 GTTGTTTGTACTTGTAACCCAGTCACATAAACTTTCCCA 26444 ||| | || |||| ||| ||| |||| | |||| Sbjct 36939 GTTCTCAGTTGAAGTAATCCATGAACAAAAACGTCCCCA 36977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151993565706444