Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_019443.1
Length=172879
Score E
Sequences producing significant alignments: (Bits) Value
seq19 805 0.0
>seq19
Length=72585
Score = 805 bits (892), Expect = 0.0
Identities = 763/974 (78%), Gaps = 0/974 (0%)
Strand=Plus/Plus
Query 162508 TGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCT 162567
||| | || ||| ||| || || | || ||||||||||||| || || |||||||||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 162568 TGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGAT 162627
|| || ||||| | | |||||| | ||||| ||||| || ||||| || |||
Sbjct 10244 ACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGAT 10303
Query 162628 ATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCT 162687
|||||||||||| | || || || | || |||||| | || || |||||||||||||||
Sbjct 10304 ATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 10363
Query 162688 GGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCA 162747
|||||||| | |||| || || ||||| || ||||||||||| || ||||||||||||
Sbjct 10364 GGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 10423
Query 162748 GCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTC 162807
|| |||||||||||||| | || || ||||| |||| ||| ||| | || | ||||||
Sbjct 10424 GCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTC 10483
Query 162808 CTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATG 162867
| |||||||| ||||| |||||| ||||||| ||||||| ||| ||||| |||
Sbjct 10484 TTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATG 10543
Query 162868 CGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTG 162927
||||||||||| ||| || |||||||| || ||| | |||||| ||||| ||| |
Sbjct 10544 CGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATC 10603
Query 162928 GTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACT 162987
|| || || ||||||| |||||||||||||| | ||||||||||||||||||||| |||
Sbjct 10604 GTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACT 10663
Query 162988 TTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATG 163047
|| |||| |||| |||| ||||| || |||||||||||||| |||||||| ||||| |||
Sbjct 10664 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 10723
Query 163048 ATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTT 163107
|||| || || |||||||||||||||||||| || ||| ||||||||||| || ||
Sbjct 10724 CTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTA 10783
Query 163108 ACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTC 163167
||||| ||||| ||| | || ||||||||| | ||||| ||| || || ||||||
Sbjct 10784 ACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTC 10843
Query 163168 GGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATC 163227
|||||||||||||||||||||||||| || ||||| || || ||||| || || | |||
Sbjct 10844 GGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATC 10903
Query 163228 TTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCT 163287
||||| || || || |||||||||||||||||||| ||||||||||| || | ||
Sbjct 10904 TTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCA 10963
Query 163288 GTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGT 163347
|| | | ||||||||||| || |||||| | ||||||||||| ||||||||||||||
Sbjct 10964 GTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGA 11023
Query 163348 TTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGAT 163407
|||||||||||||| || || || || || || || ||| || ||||| |||
Sbjct 11024 TTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGAT 11083
Query 163408 ATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTC 163467
||| | ||| | || || ||||||||||| |||||||||||||| ||||||||||||
Sbjct 11084 ATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 11143
Query 163468 CCACTTGACCTTGC 163481
||||||||||||||
Sbjct 11144 CCACTTGACCTTGC 11157
Score = 805 bits (892), Expect = 0.0
Identities = 763/974 (78%), Gaps = 0/974 (0%)
Strand=Plus/Minus
Query 162508 TGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCT 162567
||| | || ||| ||| || || | || ||||||||||||| || || |||||||||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 162568 TGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGAT 162627
|| || ||||| | | |||||| | ||||| ||||| || ||||| || |||
Sbjct 36899 ACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGAT 36840
Query 162628 ATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCT 162687
|||||||||||| | || || || | || |||||| | || || |||||||||||||||
Sbjct 36839 ATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 36780
Query 162688 GGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCA 162747
|||||||| | |||| || || ||||| || ||||||||||| || ||||||||||||
Sbjct 36779 GGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 36720
Query 162748 GCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTC 162807
|| |||||||||||||| | || || ||||| |||| ||| ||| | || | ||||||
Sbjct 36719 GCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTC 36660
Query 162808 CTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATG 162867
| |||||||| ||||| |||||| ||||||| ||||||| ||| ||||| |||
Sbjct 36659 TTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATG 36600
Query 162868 CGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTG 162927
||||||||||| ||| || |||||||| || ||| | |||||| ||||| ||| |
Sbjct 36599 CGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATC 36540
Query 162928 GTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACT 162987
|| || || ||||||| |||||||||||||| | ||||||||||||||||||||| |||
Sbjct 36539 GTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACT 36480
Query 162988 TTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATG 163047
|| |||| |||| |||| ||||| || |||||||||||||| |||||||| ||||| |||
Sbjct 36479 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 36420
Query 163048 ATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTT 163107
|||| || || |||||||||||||||||||| || ||| ||||||||||| || ||
Sbjct 36419 CTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTA 36360
Query 163108 ACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTC 163167
||||| ||||| ||| | || ||||||||| | ||||| ||| || || ||||||
Sbjct 36359 ACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTC 36300
Query 163168 GGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATC 163227
|||||||||||||||||||||||||| || ||||| || || ||||| || || | |||
Sbjct 36299 GGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATC 36240
Query 163228 TTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCT 163287
||||| || || || |||||||||||||||||||| ||||||||||| || | ||
Sbjct 36239 TTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCA 36180
Query 163288 GTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGT 163347
|| | | ||||||||||| || |||||| | ||||||||||| ||||||||||||||
Sbjct 36179 GTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGA 36120
Query 163348 TTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGAT 163407
|||||||||||||| || || || || || || || ||| || ||||| |||
Sbjct 36119 TTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGAT 36060
Query 163408 ATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTC 163467
||| | ||| | || || ||||||||||| |||||||||||||| ||||||||||||
Sbjct 36059 ATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 36000
Query 163468 CCACTTGACCTTGC 163481
||||||||||||||
Sbjct 35999 CCACTTGACCTTGC 35986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553084668642360
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