Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq19 805 0.0 >seq19 Length=72585 Score = 805 bits (892), Expect = 0.0 Identities = 763/974 (78%), Gaps = 0/974 (0%) Strand=Plus/Plus Query 162508 TGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCT 162567 ||| | || ||| ||| || || | || ||||||||||||| || || ||||||||| Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243 Query 162568 TGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGAT 162627 || || ||||| | | |||||| | ||||| ||||| || ||||| || ||| Sbjct 10244 ACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGAT 10303 Query 162628 ATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCT 162687 |||||||||||| | || || || | || |||||| | || || ||||||||||||||| Sbjct 10304 ATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 10363 Query 162688 GGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCA 162747 |||||||| | |||| || || ||||| || ||||||||||| || |||||||||||| Sbjct 10364 GGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 10423 Query 162748 GCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTC 162807 || |||||||||||||| | || || ||||| |||| ||| ||| | || | |||||| Sbjct 10424 GCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTC 10483 Query 162808 CTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATG 162867 | |||||||| ||||| |||||| ||||||| ||||||| ||| ||||| ||| Sbjct 10484 TTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATG 10543 Query 162868 CGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTG 162927 ||||||||||| ||| || |||||||| || ||| | |||||| ||||| ||| | Sbjct 10544 CGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATC 10603 Query 162928 GTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACT 162987 || || || ||||||| |||||||||||||| | ||||||||||||||||||||| ||| Sbjct 10604 GTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACT 10663 Query 162988 TTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATG 163047 || |||| |||| |||| ||||| || |||||||||||||| |||||||| ||||| ||| Sbjct 10664 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 10723 Query 163048 ATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTT 163107 |||| || || |||||||||||||||||||| || ||| ||||||||||| || || Sbjct 10724 CTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTA 10783 Query 163108 ACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTC 163167 ||||| ||||| ||| | || ||||||||| | ||||| ||| || || |||||| Sbjct 10784 ACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTC 10843 Query 163168 GGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATC 163227 |||||||||||||||||||||||||| || ||||| || || ||||| || || | ||| Sbjct 10844 GGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATC 10903 Query 163228 TTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCT 163287 ||||| || || || |||||||||||||||||||| ||||||||||| || | || Sbjct 10904 TTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCA 10963 Query 163288 GTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGT 163347 || | | ||||||||||| || |||||| | ||||||||||| |||||||||||||| Sbjct 10964 GTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGA 11023 Query 163348 TTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGAT 163407 |||||||||||||| || || || || || || || ||| || ||||| ||| Sbjct 11024 TTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGAT 11083 Query 163408 ATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTC 163467 ||| | ||| | || || ||||||||||| |||||||||||||| |||||||||||| Sbjct 11084 ATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 11143 Query 163468 CCACTTGACCTTGC 163481 |||||||||||||| Sbjct 11144 CCACTTGACCTTGC 11157 Score = 805 bits (892), Expect = 0.0 Identities = 763/974 (78%), Gaps = 0/974 (0%) Strand=Plus/Minus Query 162508 TGGGTCACCTCAGTTGACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCT 162567 ||| | || ||| ||| || || | || ||||||||||||| || || ||||||||| Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900 Query 162568 TGCTTGCTCGCAGCAGCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGAT 162627 || || ||||| | | |||||| | ||||| ||||| || ||||| || ||| Sbjct 36899 ACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGAT 36840 Query 162628 ATCGATGGTATCAGAGAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCT 162687 |||||||||||| | || || || | || |||||| | || || ||||||||||||||| Sbjct 36839 ATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCT 36780 Query 162688 GGTGCTGTCGTTCCTAGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCA 162747 |||||||| | |||| || || ||||| || ||||||||||| || |||||||||||| Sbjct 36779 GGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCA 36720 Query 162748 GCAACTCTTGATGAGTGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTC 162807 || |||||||||||||| | || || ||||| |||| ||| ||| | || | |||||| Sbjct 36719 GCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTC 36660 Query 162808 CTTATCGGAATCACAGCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATG 162867 | |||||||| ||||| |||||| ||||||| ||||||| ||| ||||| ||| Sbjct 36659 TTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATG 36600 Query 162868 CGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTG 162927 ||||||||||| ||| || |||||||| || ||| | |||||| ||||| ||| | Sbjct 36599 CGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATC 36540 Query 162928 GTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACT 162987 || || || ||||||| |||||||||||||| | ||||||||||||||||||||| ||| Sbjct 36539 GTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACT 36480 Query 162988 TTTAACTACATGTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATG 163047 || |||| |||| |||| ||||| || |||||||||||||| |||||||| ||||| ||| Sbjct 36479 TTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATG 36420 Query 163048 ATTGGAGTCGCAGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTT 163107 |||| || || |||||||||||||||||||| || ||| ||||||||||| || || Sbjct 36419 CTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTA 36360 Query 163108 ACTTCTTCTCTTATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTC 163167 ||||| ||||| ||| | || ||||||||| | ||||| ||| || || |||||| Sbjct 36359 ACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTC 36300 Query 163168 GGACAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATC 163227 |||||||||||||||||||||||||| || ||||| || || ||||| || || | ||| Sbjct 36299 GGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATC 36240 Query 163228 TTCCAGTATGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCT 163287 ||||| || || || |||||||||||||||||||| ||||||||||| || | || Sbjct 36239 TTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCA 36180 Query 163288 GTGGTCTGCATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGT 163347 || | | ||||||||||| || |||||| | ||||||||||| |||||||||||||| Sbjct 36179 GTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGA 36120 Query 163348 TTCAACTTCAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGAT 163407 |||||||||||||| || || || || || || || ||| || ||||| ||| Sbjct 36119 TTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGAT 36060 Query 163408 ATCCTTAACAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTC 163467 ||| | ||| | || || ||||||||||| |||||||||||||| |||||||||||| Sbjct 36059 ATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTC 36000 Query 163468 CCACTTGACCTTGC 163481 |||||||||||||| Sbjct 35999 CCACTTGACCTTGC 35986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553084668642360