Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_019444.1
Length=176043
Score E
Sequences producing significant alignments: (Bits) Value
seq19 760 0.0
>seq19
Length=72585
Score = 760 bits (842), Expect = 0.0
Identities = 755/975 (77%), Gaps = 2/975 (0%)
Strand=Plus/Plus
Query 162901 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 162960
||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| ||
Sbjct 10184 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 10243
Query 162961 ACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 163019
||| | | |||||||| || || |||||||| || || | |||||||| ||||| ||
Sbjct 10244 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 10302
Query 163020 CATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTC 163079
|| || || ||||||||||| || |||| ||||| ||||| || ||||||||||||||
Sbjct 10303 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 10362
Query 163080 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 163139
|||||| || | || | || ||||| || || ||||||||||| || |||||||||||
Sbjct 10363 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 10422
Query 163140 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTT 163199
|| || |||||||||||||| || ||||||||||||| ||| || | || | ||||||
Sbjct 10423 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 10482
Query 163200 CCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATCGCTTAGGTAT 163259
| | ||||| || | | |||| ||||| ||||| ||||| ||||| | || ||||| ||
Sbjct 10483 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 10542
Query 163260 GCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCT 163319
||| || ||||| |||||| |||||||| ||||| ||||||||| | || || ||| |
Sbjct 10543 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 10602
Query 163320 GGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCAC 163379
|| || || ||||||| |||||||||||||| | |||||| ||||| || ||||| ||
Sbjct 10603 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 10662
Query 163380 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATAT 163439
||||||| |||| | || ||||| || |||||||||||||| |||||||| ||||| ||
Sbjct 10663 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 10722
Query 163440 GTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGT 163499
| | || || |||||||| |||||||| ||||| ||||| |||||||| || || ||
Sbjct 10723 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 10782
Query 163500 TACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTT 163559
|| || || ||| |||||||||| ||||| | ||||| |||| || ||||||||
Sbjct 10783 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 10842
Query 163560 TGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGAT 163619
|| |||||||||||||| ||||||||||| || ||||| || |||||||| ||| | ||
Sbjct 10843 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 10902
Query 163620 CTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCC 163679
||||||||| || |||||||||||| | || ||||||||||| ||| |||||
Sbjct 10903 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 10962
Query 163680 TGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGG 163739
|| | ||||||||||| || || |||| | || ||||| |||||||| |||||
Sbjct 10963 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 11022
Query 163740 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGA 163799
||||||||||||||||| | | ||| | || ||||| | ||||| ||||| ||
Sbjct 11023 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 11082
Query 163800 CGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 163859
| | ||||| ||| || ||||||||||| ||||| ||||||||||| ||||||||
Sbjct 11083 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 11142
Query 163860 CCCACTCGATCTTGC 163874
|||||| || |||||
Sbjct 11143 CCCACTTGACCTTGC 11157
Score = 760 bits (842), Expect = 0.0
Identities = 755/975 (77%), Gaps = 2/975 (0%)
Strand=Plus/Minus
Query 162901 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 162960
||| | ||||| || | ||||| || || ||||||||||||| ||| | ||||| ||
Sbjct 36959 TGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGATCCCT 36900
Query 162961 ACTCTGTTGGCAGCAACTATCTGT-TTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGA 163019
||| | | |||||||| || || |||||||| || || | |||||||| ||||| ||
Sbjct 36899 ACTTTACTTACAGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGA 36841
Query 163020 CATTGACGGCATCCGTGAGCCCGTCGCTGGTTCACTCATGTATGGCAACAACATCATCTC 163079
|| || || ||||||||||| || |||| ||||| ||||| || ||||||||||||||
Sbjct 36840 TATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTC 36781
Query 163080 TGGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGC 163139
|||||| || | || | || ||||| || || ||||||||||| || |||||||||||
Sbjct 36780 TGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGC 36721
Query 163140 CGCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTCTTTCACTT 163199
|| || |||||||||||||| || ||||||||||||| ||| || | || | ||||||
Sbjct 36720 AGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTT 36661
Query 163200 CCTTATCGGCATCTATGCATATATGGGACGTGAATGGGAACTTTCATATCGCTTAGGTAT 163259
| | ||||| || | | |||| ||||| ||||| ||||| ||||| | || ||||| ||
Sbjct 36660 CTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAAT 36601
Query 163260 GCGCCCCTGGATCTGTGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCCT 163319
||| || ||||| |||||| |||||||| ||||| ||||||||| | || || ||| |
Sbjct 36600 GCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCAT 36541
Query 163320 GGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCAC 163379
|| || || ||||||| |||||||||||||| | |||||| ||||| || ||||| ||
Sbjct 36540 CGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAAC 36481
Query 163380 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATAT 163439
||||||| |||| | || ||||| || |||||||||||||| |||||||| ||||| ||
Sbjct 36480 TTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACAT 36421
Query 163440 GTTGGGAGTCGCTGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGT 163499
| | || || |||||||| |||||||| ||||| ||||| |||||||| || || ||
Sbjct 36420 GCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGT 36361
Query 163500 TACCTCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTT 163559
|| || || ||| |||||||||| ||||| | ||||| |||| || ||||||||
Sbjct 36360 AACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTT 36301
Query 163560 TGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGAT 163619
|| |||||||||||||| ||||||||||| || ||||| || |||||||| ||| | ||
Sbjct 36300 CGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTAT 36241
Query 163620 CTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCC 163679
||||||||| || |||||||||||| | || ||||||||||| ||| |||||
Sbjct 36240 CTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCC 36181
Query 163680 TGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGG 163739
|| | ||||||||||| || || |||| | || ||||| |||||||| |||||
Sbjct 36180 AGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGG 36121
Query 163740 TTTCAACTTCAACCAGTCCATCCTTGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAGA 163799
||||||||||||||||| | | ||| | || ||||| | ||||| ||||| ||
Sbjct 36120 ATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGA 36061
Query 163800 CGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTT 163859
| | ||||| ||| || ||||||||||| ||||| ||||||||||| ||||||||
Sbjct 36060 TATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTT 36001
Query 163860 CCCACTCGATCTTGC 163874
|||||| || |||||
Sbjct 36000 CCCACTTGACCTTGC 35986
Score = 529 bits (586), Expect = 2e-145
Identities = 734/1025 (72%), Gaps = 2/1025 (0%)
Strand=Plus/Plus
Query 164601 GGGTGGTTCGACATCCTAGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGGTGG 164660
|| ||||| |||| | |||| ||||||||||| || ||||| || || || || || |||
Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048
Query 164661 TCTGGATTACTACTTCTTCCCA-CTGCTTATCTGGCCATTGGCGGTTGGCTTACTGGCAC 164719
|| ||| | || || |||||| ||| || | || |||| || ||| ||||||| ||
Sbjct 2049 TCAGGAATTTTA-TTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107
Query 164720 AGCTTTTGTCACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGTGCTAA 164779
| | || || || |||||||| || ||| | || ||| || ||||| || |||
Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167
Query 164780 CTTTCTCACAGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 164839
||| || ||| | || || || || || || | ||||| ||| || |||||||| ||
Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227
Query 164840 TTGGGGTCCTGAGTCTCAGGGGAATTTCCAGCGGTGGTGCCAACTTGGGGGACTATGGAA 164899
|||||| || || | || || | ||| || ||||| || ||||| ||| ||||||
Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287
Query 164900 TTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGTTTCATGCTCCGCCAGTTTGAGCT 164959
||||| || || |||||||| |||| |||| || || |||||||| || ||||| |
Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347
Query 164960 GGCACGTCTCATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGT 165019
|||||| | || ||||| ||||| || ||||| ||||| | ||||| |||||
Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407
Query 165020 TTTTGTCAGCGTCTTCCTTATCTACCCACTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTC 165079
||||| || |||||||| |||||||| || || || | ||||| || || || ||
Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467
Query 165080 CTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTCCACAACTGGAC 165139
||||| || || | ||| || | ||| | | ||| | ||||| ||||||||||||||
Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527
Query 165140 CCTCAACCCCTTCCATATGATGGGTGTTGCAGGTATCTTGGGAGGAGCATTGCTATCTGC 165199
|| ||||| ||||| |||||||| || || ||| | | |||| |||| | || | |||
Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587
Query 165200 TATTCATGGAGTCACAGTTGAAAATACATTATACGAGGATGGAGAGCAGGCAAATACCTT 165259
||||| |||| || || || || ||| | | ||| ||||| || |||| || ||
Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647
Query 165260 TAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTT 165319
|| ||| | | || || | ||||||||||| || ||||| || |||||||| ||
Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707
Query 165320 CTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTT 165379
|||||| ||||| ||||| | || || ||||||||||| |||||||| || || ||| |
Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767
Query 165380 GTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGGTCTTGCTCTCAA 165439
|| || ||||| | || | |||| || | |||| || | || | || || ||
Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827
Query 165440 CCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGATCCAGAATTTGA 165499
||| ||||| ||||| ||||| || |||||| | ||||| |||||||| || |||||
Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887
Query 165500 GACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTACGTGCTTGGTTGGCACCTGC 165559
|| |||||||| || || || || | || ||||| | ||||| ||| ||||| ||
Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947
Query 165560 TGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCT 165619
||||| || ||||||||| || | ||||| || || ||| | || | || ||||| ||
Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007
Query 165620 TTAAT 165624
|||||
Sbjct 3008 TTAAT 3012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563209466237720
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