Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq19 765 0.0 >seq19 Length=72585 Score = 765 bits (848), Expect = 0.0 Identities = 765/992 (77%), Gaps = 0/992 (0%) Strand=Plus/Plus Query 8239 TGGGAAAATTTTTGCGAATGGGTCACTTCGACCAATAATCGCTTGTATGTCGGCTGGTTT 8298 |||| | |||||| |||| | ||||| || | || || | || |||| ||||| Sbjct 10166 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 10225 Query 8299 GGCGTTCTCATGATCCCAACCCTTCTTGCCGCTACAATTTGCTTCATTACCGCATTCGTT 8358 || || | |||||||| || | ||| | || || ||||| ||||| || Sbjct 10226 GGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATT 10285 Query 8359 GCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATCTCTCATGTAC 8418 |||||||||||||| || ||||| || ||||| || ||||| ||||||| || |||||| Sbjct 10286 GCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTAC 10345 Query 8419 GGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGGCCTCCACTTC 8478 || |||||||||||||||||||| || | || | |||||||| || || || |||||| Sbjct 10346 GGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTC 10405 Query 8479 TACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGGTCCTTACCAG 8538 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 10406 TACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAG 10465 Query 8539 CTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGAATGGGAACTT 8598 ||| | || | |||||| || | || | | | | || ||||||||||| ||||| ||| Sbjct 10466 CTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTT 10525 Query 8599 TCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCCTGTTGCCGCT 8658 |||| ||| | || |||||||||||||| ||| || |||||||||||||| || || Sbjct 10526 TCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCA 10585 Query 8659 GCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGATGGTATGCCT 8718 || | ||||||||| | || || || | ||||| ||||| ||||||||||| |||||| Sbjct 10586 GCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCT 10645 Query 8719 CTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCACAACATCCTG 8778 |||||||| || || || ||||||| ||| | || ||||||||||||||||||||||| Sbjct 10646 CTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTT 10705 Query 8779 ATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTCTTTTCCGCA 8838 |||||||| |||||||||||||||||||||||||| ||||| || || || || || ||| Sbjct 10706 ATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCA 10765 Query 8839 ATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAA 8898 ||||| ||||||||||| ||||| || || | |||||||| || || | ||||||| | Sbjct 10766 ATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCA 10825 Query 8899 AACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGC 8958 ||| || ||||||||||| |||||||| || ||||||||||| || || || || || Sbjct 10826 AACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGT 10885 Query 8959 TACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTC 9018 ||||| || || | ||||||||||| || || || ||||| || | | || ||| Sbjct 10886 TACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTC 10945 Query 9019 TTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATG 9078 |||||||| ||||| || ||||||||||||| || || | || | || || ||| Sbjct 10946 TTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATG 11005 Query 9079 GCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTG 9138 ||||||||||| || || ||||||||||||||||| | | || | | ||||| || Sbjct 11006 GCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTA 11065 Query 9139 CTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAA 9198 | ||||| ||||| || | | ||||| || |||||||||||||| |||||||| Sbjct 11066 ATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAG 11125 Query 9199 AGAAACGCACACAACTTCCCGCTTGACCTTGC 9230 | ||||| ||||||||||| ||||||||||| Sbjct 11126 CGTAACGCTCACAACTTCCCACTTGACCTTGC 11157 Score = 765 bits (848), Expect = 0.0 Identities = 765/992 (77%), Gaps = 0/992 (0%) Strand=Plus/Minus Query 8239 TGGGAAAATTTTTGCGAATGGGTCACTTCGACCAATAATCGCTTGTATGTCGGCTGGTTT 8298 |||| | |||||| |||| | ||||| || | || || | || |||| ||||| Sbjct 36977 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 36918 Query 8299 GGCGTTCTCATGATCCCAACCCTTCTTGCCGCTACAATTTGCTTCATTACCGCATTCGTT 8358 || || | |||||||| || | ||| | || || ||||| ||||| || Sbjct 36917 GGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATT 36858 Query 8359 GCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATCTCTCATGTAC 8418 |||||||||||||| || ||||| || ||||| || ||||| ||||||| || |||||| Sbjct 36857 GCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTAC 36798 Query 8419 GGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGGCCTCCACTTC 8478 || |||||||||||||||||||| || | || | |||||||| || || || |||||| Sbjct 36797 GGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTC 36738 Query 8479 TACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGGTCCTTACCAG 8538 ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 36737 TACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAG 36678 Query 8539 CTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGAATGGGAACTT 8598 ||| | || | |||||| || | || | | | | || ||||||||||| ||||| ||| Sbjct 36677 CTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTT 36618 Query 8599 TCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCCTGTTGCCGCT 8658 |||| ||| | || |||||||||||||| ||| || |||||||||||||| || || Sbjct 36617 TCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCA 36558 Query 8659 GCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGATGGTATGCCT 8718 || | ||||||||| | || || || | ||||| ||||| ||||||||||| |||||| Sbjct 36557 GCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCT 36498 Query 8719 CTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCACAACATCCTG 8778 |||||||| || || || ||||||| ||| | || ||||||||||||||||||||||| Sbjct 36497 CTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTT 36438 Query 8779 ATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTCTTTTCCGCA 8838 |||||||| |||||||||||||||||||||||||| ||||| || || || || || ||| Sbjct 36437 ATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCA 36378 Query 8839 ATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAA 8898 ||||| ||||||||||| ||||| || || | |||||||| || || | ||||||| | Sbjct 36377 ATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCA 36318 Query 8899 AACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGC 8958 ||| || ||||||||||| |||||||| || ||||||||||| || || || || || Sbjct 36317 AACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGT 36258 Query 8959 TACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTC 9018 ||||| || || | ||||||||||| || || || ||||| || | | || ||| Sbjct 36257 TACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTC 36198 Query 9019 TTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATG 9078 |||||||| ||||| || ||||||||||||| || || | || | || || ||| Sbjct 36197 TTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATG 36138 Query 9079 GCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTG 9138 ||||||||||| || || ||||||||||||||||| | | || | | ||||| || Sbjct 36137 GCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTA 36078 Query 9139 CTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAA 9198 | ||||| ||||| || | | ||||| || |||||||||||||| |||||||| Sbjct 36077 ATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAG 36018 Query 9199 AGAAACGCACACAACTTCCCGCTTGACCTTGC 9230 | ||||| ||||||||||| ||||||||||| Sbjct 36017 CGTAACGCTCACAACTTCCCACTTGACCTTGC 35986 Score = 598 bits (662), Expect = 4e-166 Identities = 736/1003 (73%), Gaps = 2/1003 (0%) Strand=Plus/Plus Query 9811 ATGGTTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTC 9870 ||||||||||| | | || ||||||||||| || ||||| || || || || |||||||| Sbjct 1991 ATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGGTC 2050 Query 9871 TGGACTACTTCTTTTTCCCAC-TGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTA 9929 ||| | || || |||||| ||| || ||||| ||||||| ||| ||||||| || | Sbjct 2051 AGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAACAA 2109 Query 9930 CGTTTGTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATT 9989 | || || || |||||||| ||||| | |||||| ||||||||||| ||| | Sbjct 2110 CATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAACT 2169 Query 9990 TCCTTACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTT 10049 |||||||| |||| || ||||| || || | ||||| ||| || |||||||| |||| Sbjct 2170 TCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCTTT 2229 Query 10050 GGGGTCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTT 10109 |||| || || | || || || ||| || ||| |||||||| ||| | ||| | | Sbjct 2230 GGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGACAT 2289 Query 10110 TTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGG 10169 | || || || ||||| || |||| |||||||| |||||| | || || ||||| | | Sbjct 2290 TCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAATTG 2349 Query 10170 CGAGATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTT 10229 | | | | ||| || || ||||| || || || || || | ||||| ||||| | Sbjct 2350 CACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGTAT 2409 Query 10230 TTGTCAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTT 10289 |||| ||| ||||| || || ||||| ||||| || | ||||||||||| || | Sbjct 2410 TTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTCAT 2469 Query 10290 TCGGCGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGC 10349 | || || |||| |||||||| ||| |||| ||| |||| || || || || ||||| | Sbjct 2470 TTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGACAC 2529 Query 10350 TCAATCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAA 10409 | || || ||||| ||||||||||| |||||| |||| |||| || || || | || | Sbjct 2530 TTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGCGA 2589 Query 10410 TCCACGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCA 10469 | ||||||| |||||||| |||||||||| ||||||| || ||||||||||| Sbjct 2590 TTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTTCC 2649 Query 10470 AAGCTTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCT 10529 || ||| | ||||||| |||||||| || || ||||| || || |||||||||| Sbjct 2650 GTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTTCT 2709 Query 10530 GGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGT 10589 |||| ||||| || || | ||||| || || || |||||||| ||||||||||| | Sbjct 2710 GGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCTTT 2769 Query 10590 TTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATC 10649 | |||||||| | || | |||| || | |||| | | || | || || || | Sbjct 2770 TCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAACC 2829 Query 10650 TTCGTGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGA 10709 | ||||| ||||| || ||||| ||||||||| | || | ||||||||||| ||||| | Sbjct 2830 TCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGAAA 2889 Query 10710 CGTTCTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTG 10769 | ||||| || |||||||| ||||| ||||||||| ||||||||||||||||| | | Sbjct 2890 CATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCAAG 2949 Query 10770 ACCAACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812 | || || || |||| | |||| ||||| || || || ||||| Sbjct 2950 ATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCC 2992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516479877336000