Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_019516.1
Length=161440
Score E
Sequences producing significant alignments: (Bits) Value
seq19 765 0.0
>seq19
Length=72585
Score = 765 bits (848), Expect = 0.0
Identities = 765/992 (77%), Gaps = 0/992 (0%)
Strand=Plus/Plus
Query 8239 TGGGAAAATTTTTGCGAATGGGTCACTTCGACCAATAATCGCTTGTATGTCGGCTGGTTT 8298
|||| | |||||| |||| | ||||| || | || || | || |||| |||||
Sbjct 10166 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 10225
Query 8299 GGCGTTCTCATGATCCCAACCCTTCTTGCCGCTACAATTTGCTTCATTACCGCATTCGTT 8358
|| || | |||||||| || | ||| | || || ||||| ||||| ||
Sbjct 10226 GGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATT 10285
Query 8359 GCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATCTCTCATGTAC 8418
|||||||||||||| || ||||| || ||||| || ||||| ||||||| || ||||||
Sbjct 10286 GCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTAC 10345
Query 8419 GGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGGCCTCCACTTC 8478
|| |||||||||||||||||||| || | || | |||||||| || || || ||||||
Sbjct 10346 GGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTC 10405
Query 8479 TACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGGTCCTTACCAG 8538
||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 10406 TACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAG 10465
Query 8539 CTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGAATGGGAACTT 8598
||| | || | |||||| || | || | | | | || ||||||||||| ||||| |||
Sbjct 10466 CTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTT 10525
Query 8599 TCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCCTGTTGCCGCT 8658
|||| ||| | || |||||||||||||| ||| || |||||||||||||| || ||
Sbjct 10526 TCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCA 10585
Query 8659 GCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGATGGTATGCCT 8718
|| | ||||||||| | || || || | ||||| ||||| ||||||||||| ||||||
Sbjct 10586 GCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCT 10645
Query 8719 CTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCACAACATCCTG 8778
|||||||| || || || ||||||| ||| | || |||||||||||||||||||||||
Sbjct 10646 CTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTT 10705
Query 8779 ATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTCTTTTCCGCA 8838
|||||||| |||||||||||||||||||||||||| ||||| || || || || || |||
Sbjct 10706 ATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCA 10765
Query 8839 ATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAA 8898
||||| ||||||||||| ||||| || || | |||||||| || || | ||||||| |
Sbjct 10766 ATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCA 10825
Query 8899 AACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGC 8958
||| || ||||||||||| |||||||| || ||||||||||| || || || || ||
Sbjct 10826 AACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGT 10885
Query 8959 TACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTC 9018
||||| || || | ||||||||||| || || || ||||| || | | || |||
Sbjct 10886 TACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTC 10945
Query 9019 TTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATG 9078
|||||||| ||||| || ||||||||||||| || || | || | || || |||
Sbjct 10946 TTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATG 11005
Query 9079 GCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTG 9138
||||||||||| || || ||||||||||||||||| | | || | | ||||| ||
Sbjct 11006 GCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTA 11065
Query 9139 CTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAA 9198
| ||||| ||||| || | | ||||| || |||||||||||||| ||||||||
Sbjct 11066 ATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAG 11125
Query 9199 AGAAACGCACACAACTTCCCGCTTGACCTTGC 9230
| ||||| ||||||||||| |||||||||||
Sbjct 11126 CGTAACGCTCACAACTTCCCACTTGACCTTGC 11157
Score = 765 bits (848), Expect = 0.0
Identities = 765/992 (77%), Gaps = 0/992 (0%)
Strand=Plus/Minus
Query 8239 TGGGAAAATTTTTGCGAATGGGTCACTTCGACCAATAATCGCTTGTATGTCGGCTGGTTT 8298
|||| | |||||| |||| | ||||| || | || || | || |||| |||||
Sbjct 36977 TGGGGACGTTTTTGTTCATGGATTACTTCAACTGAGAACCGTCTTTACATCGGTTGGTTC 36918
Query 8299 GGCGTTCTCATGATCCCAACCCTTCTTGCCGCTACAATTTGCTTCATTACCGCATTCGTT 8358
|| || | |||||||| || | ||| | || || ||||| ||||| ||
Sbjct 36917 GGAGTATTAATGATCCCTACTTTACTTACAGCAACTTCAGTATTCATCGTAGCATTTATT 36858
Query 8359 GCTGCTCCTCCTGTGGACATCGACGGCATCCGCGAACCAGTTGCTGGATCTCTCATGTAC 8418
|||||||||||||| || ||||| || ||||| || ||||| ||||||| || ||||||
Sbjct 36857 GCTGCTCCTCCTGTAGATATCGATGGTATCCGTGAGCCAGTATCTGGATCACTTATGTAC 36798
Query 8419 GGTAACAACATCATCTCTGGTGCAGTTGTTCCCAGCTCTAACGCAATTGGCCTCCACTTC 8478
|| |||||||||||||||||||| || | || | |||||||| || || || ||||||
Sbjct 36797 GGAAACAACATCATCTCTGGTGCTGTAATCCCTACATCTAACGCTATCGGACTTCACTTC 36738
Query 8479 TACCCCATCTGGGAAGCCGCTTCTCTTGATGAGTGGCTCTACAACGGTGGTCCTTACCAG 8538
||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 36737 TACCCAATCTGGGAAGCAGCTTCTCTTGATGAGTGGCTTTACAACGGTGGTCCTTACCAG 36678
Query 8539 CTTGTAGTTTTCCACTTCCTCCTTGGCGTCTTTGCTTATATGGGTCGTGAATGGGAACTT 8598
||| | || | |||||| || | || | | | | || ||||||||||| ||||| |||
Sbjct 36677 CTTATCGTATGTCACTTCTTCATCGGAATTTGTTCATACATGGGTCGTGAGTGGGAGCTT 36618
Query 8599 TCTTACCGCCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCTCCTGTTGCCGCT 8658
|||| ||| | || |||||||||||||| ||| || |||||||||||||| || ||
Sbjct 36617 TCTTTCCGTTTAGGAATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCTGTAGCAGCA 36558
Query 8659 GCTTCTGCTGTATTCCTTGTCTATCCTTTTGGTCAAGGTTCGTTCTCTGATGGTATGCCT 8718
|| | ||||||||| | || || || | ||||| ||||| ||||||||||| ||||||
Sbjct 36557 GCAACAGCTGTATTCATCGTATACCCAATCGGTCAGGGTTCTTTCTCTGATGGAATGCCT 36498
Query 8719 CTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGAGCACAACATCCTG 8778
|||||||| || || || ||||||| ||| | || |||||||||||||||||||||||
Sbjct 36497 CTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTT 36438
Query 8779 ATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATCTCTCTTTTCCGCA 8838
|||||||| |||||||||||||||||||||||||| ||||| || || || || || |||
Sbjct 36437 ATGCACCCATTCCACATGCTTGGTGTTGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCA 36378
Query 8839 ATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAACCGAGTCTCAA 8898
||||| ||||||||||| ||||| || || | |||||||| || || | ||||||| |
Sbjct 36377 ATGCACGGTTCACTCGTAACTTCATCTCTCATCCGTGAGACTACTGAGAACGAGTCTGCA 36318
Query 8899 AACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGTTGCCGCTCATGGC 8958
||| || ||||||||||| |||||||| || ||||||||||| || || || || ||
Sbjct 36317 AACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAACATCGTAGCTGCACACGGT 36258
Query 8959 TACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTAGAAGCTTGCATTTC 9018
||||| || || | ||||||||||| || || || ||||| || | | || |||
Sbjct 36257 TACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTC 36198
Query 9019 TTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCGGCGTCTCGACCATG 9078
|||||||| ||||| || ||||||||||||| || || | || | || || |||
Sbjct 36197 TTCCTCGCAATCTGGCCAGTAATGGGAATCTGGTTCACAGCTATGGGTATTTCAACTATG 36138
Query 9079 GCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACGGACAAGGACGAGTG 9138
||||||||||| || || ||||||||||||||||| | | || | | ||||| ||
Sbjct 36137 GCTTTCAACCTTAACGGATTCAACTTCAACCAGTCTGTAGTAGATTCAAACGGACGTGTA 36078
Query 9139 CTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGGAAGTCATGCACGAA 9198
| ||||| ||||| || | | ||||| || |||||||||||||| ||||||||
Sbjct 36077 ATTAACACATGGGCTGATATCGTAAACCGTGCTAACCTCGGTATGGAAGTAATGCACGAG 36018
Query 9199 AGAAACGCACACAACTTCCCGCTTGACCTTGC 9230
| ||||| ||||||||||| |||||||||||
Sbjct 36017 CGTAACGCTCACAACTTCCCACTTGACCTTGC 35986
Score = 598 bits (662), Expect = 4e-166
Identities = 736/1003 (73%), Gaps = 2/1003 (0%)
Strand=Plus/Plus
Query 9811 ATGGTTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTTTTTGTGGGTTGGTC 9870
||||||||||| | | || ||||||||||| || ||||| || || || || ||||||||
Sbjct 1991 ATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGGTC 2050
Query 9871 TGGACTACTTCTTTTTCCCAC-TGCTTATCTTGCAATTGGTGGCTGGCTTACTGGCACTA 9929
||| | || || |||||| ||| || ||||| ||||||| ||| ||||||| || |
Sbjct 2051 AGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAACAA 2109
Query 9930 CGTTTGTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGTGCTAATT 9989
| || || || |||||||| ||||| | |||||| ||||||||||| ||| |
Sbjct 2110 CATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAACT 2169
Query 9990 TCCTTACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTT 10049
|||||||| |||| || ||||| || || | ||||| ||| || |||||||| ||||
Sbjct 2170 TCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCTTT 2229
Query 10050 GGGGTCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTCTGGGCTT 10109
|||| || || | || || || ||| || ||| |||||||| ||| | ||| | |
Sbjct 2230 GGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGACAT 2289
Query 10110 TTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCAGTTTGAGCTGG 10169
| || || || ||||| || |||| |||||||| |||||| | || || ||||| | |
Sbjct 2290 TCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAATTG 2349
Query 10170 CGAGATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCCTATTGCTGTTT 10229
| | | | ||| || || ||||| || || || || || | ||||| ||||| |
Sbjct 2350 CACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGTAT 2409
Query 10230 TTGTCAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTCTTTGCGCCGAGTT 10289
|||| ||| ||||| || || ||||| ||||| || | ||||||||||| || |
Sbjct 2410 TTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTCAT 2469
Query 10290 TCGGCGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGC 10349
| || || |||| |||||||| ||| |||| ||| |||| || || || || ||||| |
Sbjct 2470 TTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGACAC 2529
Query 10350 TCAATCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCGCTCCTATCAGCAA 10409
| || || ||||| ||||||||||| |||||| |||| |||| || || || | || |
Sbjct 2530 TTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGCGA 2589
Query 10410 TCCACGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAAGCAAACACTTTCA 10469
| ||||||| |||||||| |||||||||| ||||||| || |||||||||||
Sbjct 2590 TTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTTCC 2649
Query 10470 AAGCTTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTTACTGCTAACCGTTTCT 10529
|| ||| | ||||||| |||||||| || || ||||| || || ||||||||||
Sbjct 2650 GTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTTCT 2709
Query 10530 GGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTTCATTTCTTTATGCTGT 10589
|||| ||||| || || | ||||| || || || |||||||| ||||||||||| |
Sbjct 2710 GGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCTTT 2769
Query 10590 TTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATTGGTCTTGCTCTCAATC 10649
| |||||||| | || | |||| || | |||| | | || | || || || |
Sbjct 2770 TCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAACC 2829
Query 10650 TTCGTGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAAGATCCTGAATTTGAGA 10709
| ||||| ||||| || ||||| ||||||||| | || | ||||||||||| ||||| |
Sbjct 2830 TCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGAAA 2889
Query 10710 CGTTCTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCATGGATGGCACCAGTTG 10769
| ||||| || |||||||| ||||| ||||||||| ||||||||||||||||| | |
Sbjct 2890 CATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCAAG 2949
Query 10770 ACCAACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTCC 10812
| || || || |||| | |||| ||||| || || || |||||
Sbjct 2950 ATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCC 2992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 516479877336000
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