Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 154 1e-31 >seq1 Length=2053059 Score = 154 bits (170), Expect = 1e-31 Identities = 333/491 (68%), Gaps = 9/491 (2%) Strand=Plus/Plus Query 475681 TGACAAA-TCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAA 475739 ||| ||| ||||| || |||||||||| ||||| || || ||||| ||||||| ||| Sbjct 532501 TGAAAAAGTCACAGATCGATGAAATTGTCCTTGTCGGCGGGTCAACTCGAATTCCTAAAG 532560 Query 475740 TAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTG 475799 | || | || | ||||||| | |||||| | ||| | | || || || | Sbjct 532561 TTCAAGCGCTACTAAGAGAATATTTTGACGGTAAAGAACCAAACAAGGGAGTCAACCCCG 532620 Query 475800 ATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACG 475859 | ||||| ||||||||||| || ||||| |||| || || | || || || | | Sbjct 532621 ACGAAGCAGTTGCATATGGCGCAGCTGTGCAAGGAGGAATCCTCTCTGGGGAAGGTGGAG 532680 Query 475860 A-GAAACTAAATA-ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAAC 475917 | ||||| ||| | || ||| ||| |||| || |||| || | || | ||||| Sbjct 532681 ATGAAACAAAAGACATCTTG--CTTCTTGATGTTGCTCCCCTCACTCAGGGAATCGAAAC 532738 Query 475918 AGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATC 475977 || ||||| ||||||| || || ||| || || ||| ||||| ||||||||| Sbjct 532739 CGTCGGAGGAGTTATGACAAAGCTGATTCCTAGGAACACTGTGATCCCGACCAAAAAATC 532798 Query 475978 AAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGG 476037 | | |||| ||||||| || |||||| ||||| | || ||| | || || || Sbjct 532799 ACAGACATTTACCACTTACCAAGACAATCAACAGACTGTGATGATTCAAGTGTTCGAGGG 532858 Query 476038 TGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT--ATT 476095 || || | || ||||| ||| | ||| |||| || | || | || ||| Sbjct 532859 GGAGCGAGCCATGACGAAAGACAATCATCTACTCGGAAAGTTCGAGCTC--ACGTCCATT 532916 Query 476096 CCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGT 476155 || |||||||| | || ||||||||||| || || |||||||| ||||| |||||||| Sbjct 532917 CCCCCTGCTCCGCGCGGTGTTCCTCAAATCGAGGTAACTTTTGAAATTGACGCAAATGGC 532976 Query 476156 ATTCTTAATGT 476166 || | ||||| Sbjct 532977 ATATTGAATGT 532987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178384997812