Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1 154 1e-31
>seq1
Length=2053059
Score = 154 bits (170), Expect = 1e-31
Identities = 333/491 (68%), Gaps = 9/491 (2%)
Strand=Plus/Plus
Query 475681 TGACAAA-TCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAA 475739
||| ||| ||||| || |||||||||| ||||| || || ||||| ||||||| |||
Sbjct 532501 TGAAAAAGTCACAGATCGATGAAATTGTCCTTGTCGGCGGGTCAACTCGAATTCCTAAAG 532560
Query 475740 TAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTG 475799
| || | || | ||||||| | |||||| | ||| | | || || || |
Sbjct 532561 TTCAAGCGCTACTAAGAGAATATTTTGACGGTAAAGAACCAAACAAGGGAGTCAACCCCG 532620
Query 475800 ATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACG 475859
| ||||| ||||||||||| || ||||| |||| || || | || || || | |
Sbjct 532621 ACGAAGCAGTTGCATATGGCGCAGCTGTGCAAGGAGGAATCCTCTCTGGGGAAGGTGGAG 532680
Query 475860 A-GAAACTAAATA-ATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAAC 475917
| ||||| ||| | || ||| ||| |||| || |||| || | || | |||||
Sbjct 532681 ATGAAACAAAAGACATCTTG--CTTCTTGATGTTGCTCCCCTCACTCAGGGAATCGAAAC 532738
Query 475918 AGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATC 475977
|| ||||| ||||||| || || ||| || || ||| ||||| |||||||||
Sbjct 532739 CGTCGGAGGAGTTATGACAAAGCTGATTCCTAGGAACACTGTGATCCCGACCAAAAAATC 532798
Query 475978 AAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGG 476037
| | |||| ||||||| || |||||| ||||| | || ||| | || || ||
Sbjct 532799 ACAGACATTTACCACTTACCAAGACAATCAACAGACTGTGATGATTCAAGTGTTCGAGGG 532858
Query 476038 TGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGT--ATT 476095
|| || | || ||||| ||| | ||| |||| || | || | || |||
Sbjct 532859 GGAGCGAGCCATGACGAAAGACAATCATCTACTCGGAAAGTTCGAGCTC--ACGTCCATT 532916
Query 476096 CCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGT 476155
|| |||||||| | || ||||||||||| || || |||||||| ||||| ||||||||
Sbjct 532917 CCCCCTGCTCCGCGCGGTGTTCCTCAAATCGAGGTAACTTTTGAAATTGACGCAAATGGC 532976
Query 476156 ATTCTTAATGT 476166
|| | |||||
Sbjct 532977 ATATTGAATGT 532987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268178384997812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |