Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq19 782 0.0 >seq19 Length=72585 Score = 782 bits (866), Expect = 0.0 Identities = 755/964 (78%), Gaps = 4/964 (0%) Strand=Plus/Plus Query 160897 ACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTGATGATTCCCTGCTTG-CTCGC 160955 || || ||||| ||||| | ||||||||||| || | ||||| |||| ||| || | Sbjct 10196 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGAT-CCCTACTTTACTTAC 10254 Query 160956 TGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTCCCCCTGTGGACATCGACGGCA 161014 || || | || |||||| | || || ||| |||||| ||||| || ||||| || | Sbjct 10255 AGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTA 10313 Query 161015 TTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAACATCATCTCTGGTGCTGTTA 161074 | ||||| || || |||| || || ||||| |||||||||||||||||||||||||| | Sbjct 10314 TCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAA 10373 Query 161075 TCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGGGAAGCAGCAAGTCTGG 161134 ||||| | |||||||||||||| || ||||||||||| |||||||||||||| ||| | Sbjct 10374 TCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTG 10433 Query 161135 ACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTGTTCCACTTCCTGATTGGCA 161194 | || ||||| |||||||||||||||| ||| || | || | |||||| | || || | Sbjct 10434 ATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAA 10493 Query 161195 TCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCGTCTGGGAATGCGTCCTTGGA 161254 | | | | |||||||||||||||||||| ||||||| |||| | |||||||||||||||| Sbjct 10494 TTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGA 10553 Query 161255 TTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCAGTGTTCCTGGTCTATCCTT 161314 || ||||| |||||||||||||| || ||||| | || || ||| | || || || Sbjct 10554 TTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAA 10613 Query 161315 TCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTCAACTACA 161374 ||||||| |||||||||||||||| ||||||||| || || ||||| || ||||||| || Sbjct 10614 TCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCA 10673 Query 161375 TGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGCTCGGCGTAG 161434 || | || ||||| || ||||||||||| || |||||||| ||||| ||||| || || | Sbjct 10674 TGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTG 10733 Query 161435 CAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGC 161494 | ||||| || || ||||| || ||| ||||||||||||||| || || || || || | Sbjct 10734 CTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTC 10793 Query 161495 TGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAG 161554 | | ||||| || || || |||||||| ||| || ||||||||||| ||||||| Sbjct 10794 TCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAG 10853 Query 161555 AAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACG 161614 ||||||| ||||||||||| ||||| ||||| |||||||| ||||| || |||||||||| Sbjct 10854 AAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACG 10913 Query 161615 CTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCA 161674 |||| ||||||||||| || || || ||||||||||| || ||||| || | || | Sbjct 10914 CTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAA 10973 Query 161675 TCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCA 161734 |||||||||| || |||| | || ||||| |||||||| || || |||||||||| Sbjct 10974 TCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCA 11033 Query 161735 ACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACC 161794 |||||||| | || ||| | || || || ||||| ||||| || | | |||| Sbjct 11034 ACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACC 11093 Query 161795 GTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCTCTTGACC 161854 ||||| || || |||||||| ||||||||||| || |||||||||||||| ||||||| Sbjct 11094 GTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACC 11153 Query 161855 TTGC 161858 |||| Sbjct 11154 TTGC 11157 Score = 782 bits (866), Expect = 0.0 Identities = 755/964 (78%), Gaps = 4/964 (0%) Strand=Plus/Minus Query 160897 ACCGACAACCGCCTTTATGTTGGTTGGTTCGGCGTCCTGATGATTCCCTGCTTG-CTCGC 160955 || || ||||| ||||| | ||||||||||| || | ||||| |||| ||| || | Sbjct 36947 ACTGAGAACCGTCTTTACATCGGTTGGTTCGGAGTATTAATGAT-CCCTACTTTACTTAC 36889 Query 160956 TGCTACCATTTGT-TTCATCATTGCCTTCGTTGGTGCTCCCCCTGTGGACATCGACGGCA 161014 || || | || |||||| | || || ||| |||||| ||||| || ||||| || | Sbjct 36888 AGCAACT-TCAGTATTCATCGTAGCATTTATTGCTGCTCCTCCTGTAGATATCGATGGTA 36830 Query 161015 TTCGTGAACCCGTCGCTGGTTCGCTCATGTATGGAAACAACATCATCTCTGGTGCTGTTA 161074 | ||||| || || |||| || || ||||| |||||||||||||||||||||||||| | Sbjct 36829 TCCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAA 36770 Query 161075 TCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCATCTGGGAAGCAGCAAGTCTGG 161134 ||||| | |||||||||||||| || ||||||||||| |||||||||||||| ||| | Sbjct 36769 TCCCTACATCTAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTTCTCTTG 36710 Query 161135 ACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTGTGTTCCACTTCCTGATTGGCA 161194 | || ||||| |||||||||||||||| ||| || | || | |||||| | || || | Sbjct 36709 ATGAGTGGCTTTACAACGGTGGTCCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAA 36650 Query 161195 TCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACCGTCTGGGAATGCGTCCTTGGA 161254 | | | | |||||||||||||||||||| ||||||| |||| | |||||||||||||||| Sbjct 36649 TTTGTTCATACATGGGTCGTGAGTGGGAGCTTTCTTTCCGTTTAGGAATGCGTCCTTGGA 36590 Query 161255 TTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTGCAGTGTTCCTGGTCTATCCTT 161314 || ||||| |||||||||||||| || ||||| | || || ||| | || || || Sbjct 36589 TTGCTGTAGCTTACTCTGCTCCTGTAGCAGCAGCAACAGCTGTATTCATCGTATACCCAA 36530 Query 161315 TCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTCAACTACA 161374 ||||||| |||||||||||||||| ||||||||| || || ||||| || ||||||| || Sbjct 36529 TCGGTCAGGGTTCTTTCTCTGATGGAATGCCTCTTGGTATTTCTGGAACTTTCAACTTCA 36470 Query 161375 TGCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGCTCGGCGTAG 161434 || | || ||||| || ||||||||||| || |||||||| ||||| ||||| || || | Sbjct 36469 TGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGTGTTG 36410 Query 161435 CAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGC 161494 | ||||| || || ||||| || ||| ||||||||||||||| || || || || || | Sbjct 36409 CTGGTGTATTCGGTGGTTCACTTTTCTCTGCAATGCACGGTTCACTCGTAACTTCATCTC 36350 Query 161495 TGGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAG 161554 | | ||||| || || || |||||||| ||| || ||||||||||| ||||||| Sbjct 36349 TCATCCGTGAGACTACTGAGAACGAGTCTGCAAACGCAGGATACAAGTTCGGACAAGAAG 36290 Query 161555 AAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACG 161614 ||||||| ||||||||||| ||||| ||||| |||||||| ||||| || |||||||||| Sbjct 36289 AAGAGACTTACAACATCGTAGCTGCACACGGTTACTTCGGACGTCTTATCTTCCAATACG 36230 Query 161615 CTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCA 161674 |||| ||||||||||| || || || ||||||||||| || ||||| || | || | Sbjct 36229 CTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCAATCTGGCCAGTAATGGGAA 36170 Query 161675 TCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCA 161734 |||||||||| || |||| | || ||||| |||||||| || || |||||||||| Sbjct 36169 TCTGGTTCACAGCTATGGGTATTTCAACTATGGCTTTCAACCTTAACGGATTCAACTTCA 36110 Query 161735 ACCAGTCTATCGTTGATAGTCAGGGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACC 161794 |||||||| | || ||| | || || || ||||| ||||| || | | |||| Sbjct 36109 ACCAGTCTGTAGTAGATTCAAACGGACGTGTAATTAACACATGGGCTGATATCGTAAACC 36050 Query 161795 GTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCTCTTGACC 161854 ||||| || || |||||||| ||||||||||| || |||||||||||||| ||||||| Sbjct 36049 GTGCTAACCTCGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACC 35990 Query 161855 TTGC 161858 |||| Sbjct 35989 TTGC 35986 Score = 610 bits (676), Expect = 7e-170 Identities = 749/1020 (73%), Gaps = 2/1020 (0%) Strand=Plus/Plus Query 162111 GGGTGGTTTGATGTCCTTGACGACTGGCTTAAAAGAGACCGTTTCGTTTTTGTTGGCTGG 162170 || |||||||| | | |||||||||||||| | || |||||||| || || || ||| Sbjct 1989 GGATGGTTTGACAACGTAGACGACTGGCTTAAGCGTGATCGTTTCGTATTCGTAGGTTGG 2048 Query 162171 TCTGGACTTCTTCTTTTTCCCAC-TGCTTATCTTGCTCTTGGGGGTTGGCTTACTGGGAC 162229 || ||| || || || |||||| ||| || |||| |||| || ||| ||||||| || Sbjct 2049 TCAGGAATT-TTATTATTCCCATGTGCATACTTTGCAGTTGGTGGATGGTTTACTGGAAC 2107 Query 162230 TACTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGTGCAAA 162289 || ||||| || ||||| || ||||| | || ||||| || |||||||| || Sbjct 2108 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAGGGATGTAA 2167 Query 162290 CTTTCTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTGCTTCT 162349 ||| ||||| ||||||| || || ||| | || ||||| ||| || ||||| || || Sbjct 2168 CTTCCTTACATCGGCAGTATCAACACCATCTAACAGTATGGCTCACTCACTTCTTCTCCT 2227 Query 162350 ATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTCTGGAC 162409 ||||| || || | ||||| || |||| || ||||| || ||||| ||| | ||||| Sbjct 2228 TTGGGGACCAGAAGCACAAGGTGAGTTCACACGTTGGTGTCAGCTTGGTGGATTATGGAC 2287 Query 162410 TTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTCGCCAGTTTGAACT 162469 || || || || ||||| || || | | | || || || ||||| || || |||||| | Sbjct 2288 ATTCGTAGCACTTCACGGTGCATTCGGATTAATCGGATTTATGCTCCGTCAATTTGAAAT 2347 Query 162470 GGCACGACTTATCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGTCCTATTGCTGT 162529 ||||| | |||||||| ||||| || ||||| ||||||| ||||| ||||| Sbjct 2348 TGCACGTGCAGTACAAATTCGTCCGTACAACGCGATTGCATTCTCAGCACCTATCGCTGT 2407 Query 162530 ATTCGTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGTTCTTCGCACCGTC 162589 ||| || ||| || ||||| || || | |||||||| |||||||| ||||| || Sbjct 2408 ATTTGTATCTGTATTCCTTATTTACCCACTTGGACAATCAGGATGGTTCTTTGCACCTTC 2467 Query 162590 GTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGTTCCATAACTGGAC 162649 || || || || | ||| ||||| ||| | || ||| ||||||||||||| |||||||| Sbjct 2468 ATTTGGTGTAGCGGGAATTTTCCGTTTCATTCTTTTCTTCCAAGGGTTCCACAACTGGAC 2527 Query 162650 GCTAAATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTGCATTGCTCTCTGC 162709 || || || || ||||||||||| ||||| ||| | ||||| | ||| | || | ||| Sbjct 2528 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTTGGAGCAGCACTTCTTTGTGC 2587 Query 162710 TATTCATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAACAAGCAAACACTTT 162769 ||||| |||| || || || || ||||| | ||||||||| || |||||||||| Sbjct 2588 GATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACTTT 2647 Query 162770 TAAAGCATTTGACTCCACACAGGAGGAAGAAACGTATTCGATGGTTACTGCGAACCGCTT 162829 |||||| || | || || | ||||| || || || ||||| || || ||||| || Sbjct 2648 CCGTGCATTTAACCCAACTCAAGCTGAAGAGACTTACTCAATGGTAACAGCAAACCGTTT 2707 Query 162830 CTGGTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGGTTGCATTTCTTTATGCT 162889 ||||||||||||||||||| | ||||| ||||||||||||| | || ||||||||||| Sbjct 2708 CTGGTCACAGATTTTCGGTGTAGCTTTCTCTAACAAGCGTTGGCTTCACTTCTTTATGCT 2767 Query 162890 CTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTCAA 162949 || || || || | || | |||| | | ||| || | ||| | || || || Sbjct 2768 TTTCGTACCTGTAACAGGGTTATGGATGTCAGCACTTGGTGTTGTAGGATTAGCACTTAA 2827 Query 162950 TCTTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCAGAAGACCCTGAGTTTGA 163009 || ||||| |||||||| ||||| ||||| | ||||| || ||||| ||||||||||| Sbjct 2828 CCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCAGCTGAAGATCCTGAGTTTGA 2887 Query 163010 GACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGAGCATGGTTAGCACCAGT 163069 || ||||| || ||||| |||||||| || ||||| |||| |||||| | ||| | Sbjct 2888 AACATTCTACACTAAGAATATTCTTCTTAACGAAGGTATTCGTGCATGGATGGCAGCTCA 2947 Query 163070 GGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCTTGCCAAGAGGCAACGCTCT 163129 || || |||||||| ||| |||| |||||||| ||||| | ||| | || |||||||| Sbjct 2948 AGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 3007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547747069910040