Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq19 706 0.0 >seq19 Length=72585 Score = 706 bits (782), Expect = 0.0 Identities = 744/979 (76%), Gaps = 0/979 (0%) Strand=Plus/Minus Query 124044 CAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCA 124103 ||||||| ||||| |||||||||||||| || || | || ||||| ||||||||||| | Sbjct 11162 CAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGA 11103 Query 124104 AGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAA 124163 ||| || | ||||| | |||| ||||||| | | |||||| | ||| || | Sbjct 11102 GGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTA 11043 Query 124164 CTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGG 124223 | || ||||| |||||||| || || | |||||| ||||| || | |||||||||| | Sbjct 11042 CAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTG 10983 Query 124224 TTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGT 124283 | ||||| | | | || || | | ||| ||||||||||| || | |||||||| Sbjct 10982 TGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 10923 Query 124284 TGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGT 124343 |||||||||| || |||||||||||||| || |||||||||||||| ||||| ||||||| Sbjct 10922 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGT 10863 Query 124344 ATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTT 124403 | || |||||||||||||||||||| || || ||| ||||| | ||| || || | Sbjct 10862 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCT 10803 Query 124404 CTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGA 124463 | | ||| ||||| || || || || ||||| |||||||| ||||| | || || |||| Sbjct 10802 CACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGA 10743 Query 124464 ACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGA 124523 | | || || || || ||||||||| || ||||| || ||||| ||||| || |||| Sbjct 10742 ATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 10683 Query 124524 AAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAAC 124583 | |||| ||| ||||||||||| || || |||||||| ||||| ||||||||||| |||| Sbjct 10682 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAAC 10623 Query 124584 CCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAG 124643 ||||||| | ||||||||| | ||||||||| ||| || | ||| || || || |||| Sbjct 10622 CCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAG 10563 Query 124644 CAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGT 124703 | ||| |||||||||||||||||||| | | | || || ||||||| | ||||||| Sbjct 10562 CTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGT 10503 Query 124704 ATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACA 124763 ||| |||| || || | |||||| | | | | ||| ||||||||||| || || | Sbjct 10502 ATGAACAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAA 10443 Query 124764 ACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTG 124823 ||| ||||||| || |||||||||||||||||||||||||| |||||||||||||| | Sbjct 10442 GCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAG 10383 Query 124824 ATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTG 124883 ||| || | || |||||||||||||||||||| || || | | || || | ||||| Sbjct 10382 ATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTG 10323 Query 124884 GTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAAACATG 124943 | || | ||| || |||||||| |||||||| || ||||||||||| |||||||| || Sbjct 10322 GCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTG 10263 Query 124944 CTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGT 125003 | |||||| ||||| || ||||||| || || |||||||| | |||| | || Sbjct 10262 AAGTTGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGT 10203 Query 125004 TGTTTGTTGATGTTACCCA 125022 | | ||||| || | ||| Sbjct 10202 TCTCAGTTGAAGTAATCCA 10184 Score = 706 bits (782), Expect = 0.0 Identities = 744/979 (76%), Gaps = 0/979 (0%) Strand=Plus/Plus Query 124044 CAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCA 124103 ||||||| ||||| |||||||||||||| || || | || ||||| ||||||||||| | Sbjct 35981 CAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGA 36040 Query 124104 AGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAA 124163 ||| || | ||||| | |||| ||||||| | | |||||| | ||| || | Sbjct 36041 GGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTA 36100 Query 124164 CTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGG 124223 | || ||||| |||||||| || || | |||||| ||||| || | |||||||||| | Sbjct 36101 CAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTG 36160 Query 124224 TTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGT 124283 | ||||| | | | || || | | ||| ||||||||||| || | |||||||| Sbjct 36161 TGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 36220 Query 124284 TGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGT 124343 |||||||||| || |||||||||||||| || |||||||||||||| ||||| ||||||| Sbjct 36221 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGT 36280 Query 124344 ATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTT 124403 | || |||||||||||||||||||| || || ||| ||||| | ||| || || | Sbjct 36281 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCT 36340 Query 124404 CTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGA 124463 | | ||| ||||| || || || || ||||| |||||||| ||||| | || || |||| Sbjct 36341 CACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGA 36400 Query 124464 ACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGA 124523 | | || || || || ||||||||| || ||||| || ||||| ||||| || |||| Sbjct 36401 ATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 36460 Query 124524 AAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAAC 124583 | |||| ||| ||||||||||| || || |||||||| ||||| ||||||||||| |||| Sbjct 36461 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAAC 36520 Query 124584 CCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAG 124643 ||||||| | ||||||||| | ||||||||| ||| || | ||| || || || |||| Sbjct 36521 CCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAG 36580 Query 124644 CAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGT 124703 | ||| |||||||||||||||||||| | | | || || ||||||| | ||||||| Sbjct 36581 CTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGT 36640 Query 124704 ATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACA 124763 ||| |||| || || | |||||| | | | | ||| ||||||||||| || || | Sbjct 36641 ATGAACAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAA 36700 Query 124764 ACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTG 124823 ||| ||||||| || |||||||||||||||||||||||||| |||||||||||||| | Sbjct 36701 GCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAG 36760 Query 124824 ATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTG 124883 ||| || | || |||||||||||||||||||| || || | | || || | ||||| Sbjct 36761 ATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTG 36820 Query 124884 GTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAAACATG 124943 | || | ||| || |||||||| |||||||| || ||||||||||| |||||||| || Sbjct 36821 GCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTG 36880 Query 124944 CTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGT 125003 | |||||| ||||| || ||||||| || || |||||||| | |||| | || Sbjct 36881 AAGTTGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGT 36940 Query 125004 TGTTTGTTGATGTTACCCA 125022 | | ||||| || | ||| Sbjct 36941 TCTCAGTTGAAGTAATCCA 36959 Score = 499 bits (552), Expect = 3e-136 Identities = 738/1045 (71%), Gaps = 23/1045 (2%) Strand=Plus/Minus Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925 |||||| ||||| || | ||| | || || || |||||||||| || ||||| || || Sbjct 3011 TTAAAGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAGGTTTTCATGAGGCTG 2952 Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985 || || || ||||||||| | || ||||| ||||||||||| ||||| || ||||| Sbjct 2951 ATCTTGAGCTGCCATCCATGCACGAATACCTTCGTTAAGAAGAATATTCTTAGTGTAGAA 2892 Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045 || || ||||| || ||||| ||||| | |||||||| ||||| ||||||||||| | Sbjct 2891 TGTTTCAAACTCAGGATCTTCAGCTGCACGGATCTCTTGTGATACGAAGTCGTATGCACG 2832 Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105 |||||||||||||| ||||| | ||| | | ||| |||| | || | ||||| || Sbjct 2831 GAGGTTAAGTGCTAATCCTACAACACCAAGTGCTGACATCCATAACCCTGTTACAGGTAC 2772 Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165 ||| | ||||| |||||| | | | |||||||| || || | ||| || |||||||| Sbjct 2771 GAAAAGCATAAAGAAGTGAAGCCAACGCTTGTTAGAGAAAGCTACACCGAAAATCTGTGA 2712 Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225 |||||| | ||| ||||| | ||| ||||| ||||| | || || || | ||||| Sbjct 2711 CCAGAAACGGTTTGCTGTTACCATTGAGTAAGTCTCTTCAGCTTGAGTTGGGTTAAATGC 2652 Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285 | |||||| | ||||| || ||| || |||| | | ||| Sbjct 2651 ACGGAAAGT----GTTTGAA-----CCATCACCAT------------CTTCGAAAAGTGT 2613 Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345 ||||| || ||||| || ||||| ||||| || | |||| | || |||| || || || Sbjct 2612 GTTCTCTACAGTTGCTCCGTGAATCGCACAAAGAAGTGCTGCTCCAAGTACACCAGCTAC 2553 Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405 ||||||||||| ||||| || | ||| ||||||||| ||||| | ||| | || | Sbjct 2552 TCCCATCATGTGGAATGGGTTAAGTGTCCAGTTGTGGAACCCTTGGAAGAAAAGAATGAA 2493 Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465 ||| || ||| | || ||||| ||||| ||||| |||||||| | || || ||||| Sbjct 2492 ACGGAAAATTCCCGCTACACCAAATGAAGGTGCAAAGAACCATCCTGATTGTCCAAGTGG 2433 Query 123466 ATAGATCAGAAAGAT-GCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGT 123524 || || || || | | || || || |||||| || |||||||| | ||||||| Sbjct 2432 GTAAATAAGGAATACAGATACA-AATACAGCGATAGGTGCTGAGAATGCAATCGCGTTGT 2374 Query 123525 AAGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTC 123584 | || | ||| ||| | ||| || |||||||| | |||||| || || || | || Sbjct 2373 ACGGACGAATTTGTACTGCACGTGCAATTTCAAATTGACGGAGCATAAATCCGATTAATC 2314 Query 123585 CAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGA 123644 | || | || || | |||||| || |||||| || || || || ||||||| || Sbjct 2313 CGAATGCACCGTGAAGTGCTACGAATGTCCATAATCCACCAAGCTGACACCAACGTGTGA 2254 Query 123645 ATGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAG 123704 | ||||||||||| ||||||||||||| | || ||| |||| || | | Sbjct 2253 ACTCACCTTGTGCTTCTGGTCCCCAAAGGAGAAGAAGTGAGTGAGCCATACTGTTAGATG 2194 Query 123705 GTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCAT 123764 |||| || ||||| | ||| | |||||| ||||||||| |||||| ||| | ||| | Sbjct 2193 GTGTTGATACTGCCGATGTAAGGAAGTTACATCCCTCAAGGTATGAACTTGCTAAACCGT 2134 Query 123765 GTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACG 123824 |||| |||||||| || ||||| || ||||| ||||| ||||| | || | || | Sbjct 2133 GTGTGTACCATGAAGTTACGAATGTTGTTCCAGTAAACCATCCACCAACTGCAAAGTATG 2074 Query 123825 CACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACC 123884 |||| || | | ||||| || ||||| |||| |||||| |||||||| | ||| | || Sbjct 2073 CACATGGGAATAATAAAATTCCTGACCAACCTACGAATACGAAACGATCACGCTTAAGCC 2014 Query 123885 AGTCGTCAAGAACATCAAACCAACC 123909 ||||||| | |||||||| || Sbjct 2013 AGTCGTCTACGTTGTCAAACCATCC 1989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998262487880