Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq19 706 0.0
>seq19
Length=72585
Score = 706 bits (782), Expect = 0.0
Identities = 744/979 (76%), Gaps = 0/979 (0%)
Strand=Plus/Minus
Query 124044 CAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCA 124103
||||||| ||||| |||||||||||||| || || | || ||||| ||||||||||| |
Sbjct 11162 CAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGA 11103
Query 124104 AGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAA 124163
||| || | ||||| | |||| ||||||| | | |||||| | ||| || |
Sbjct 11102 GGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTA 11043
Query 124164 CTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGG 124223
| || ||||| |||||||| || || | |||||| ||||| || | |||||||||| |
Sbjct 11042 CAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTG 10983
Query 124224 TTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGT 124283
| ||||| | | | || || | | ||| ||||||||||| || | ||||||||
Sbjct 10982 TGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 10923
Query 124284 TGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGT 124343
|||||||||| || |||||||||||||| || |||||||||||||| ||||| |||||||
Sbjct 10922 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGT 10863
Query 124344 ATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTT 124403
| || |||||||||||||||||||| || || ||| ||||| | ||| || || |
Sbjct 10862 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCT 10803
Query 124404 CTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGA 124463
| | ||| ||||| || || || || ||||| |||||||| ||||| | || || ||||
Sbjct 10802 CACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGA 10743
Query 124464 ACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGA 124523
| | || || || || ||||||||| || ||||| || ||||| ||||| || ||||
Sbjct 10742 ATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 10683
Query 124524 AAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAAC 124583
| |||| ||| ||||||||||| || || |||||||| ||||| ||||||||||| ||||
Sbjct 10682 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAAC 10623
Query 124584 CCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAG 124643
||||||| | ||||||||| | ||||||||| ||| || | ||| || || || ||||
Sbjct 10622 CCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAG 10563
Query 124644 CAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGT 124703
| ||| |||||||||||||||||||| | | | || || ||||||| | |||||||
Sbjct 10562 CTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGT 10503
Query 124704 ATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACA 124763
||| |||| || || | |||||| | | | | ||| ||||||||||| || || |
Sbjct 10502 ATGAACAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAA 10443
Query 124764 ACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTG 124823
||| ||||||| || |||||||||||||||||||||||||| |||||||||||||| |
Sbjct 10442 GCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAG 10383
Query 124824 ATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTG 124883
||| || | || |||||||||||||||||||| || || | | || || | |||||
Sbjct 10382 ATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTG 10323
Query 124884 GTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAAACATG 124943
| || | ||| || |||||||| |||||||| || ||||||||||| |||||||| ||
Sbjct 10322 GCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTG 10263
Query 124944 CTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGT 125003
| |||||| ||||| || ||||||| || || |||||||| | |||| | ||
Sbjct 10262 AAGTTGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGT 10203
Query 125004 TGTTTGTTGATGTTACCCA 125022
| | ||||| || | |||
Sbjct 10202 TCTCAGTTGAAGTAATCCA 10184
Score = 706 bits (782), Expect = 0.0
Identities = 744/979 (76%), Gaps = 0/979 (0%)
Strand=Plus/Plus
Query 124044 CAGATGCTAGGTCTAGTGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCCA 124103
||||||| ||||| |||||||||||||| || || | || ||||| ||||||||||| |
Sbjct 35981 CAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGA 36040
Query 124104 AGTTTGCTCTGTTTAGAACATCACCCCATGTTGGGACGATTTTTCCGTTAGCATCAACAA 124163
||| || | ||||| | |||| ||||||| | | |||||| | ||| || |
Sbjct 36041 GGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTA 36100
Query 124164 CTGATTGGTTAAAGTTGAAACCATTCAAGTTGAATGCCATTGTGCAGATACCCATAGAGG 124223
| || ||||| |||||||| || || | |||||| ||||| || | |||||||||| |
Sbjct 36101 CAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTG 36160
Query 124224 TTAACCATACACATACAACAGGGAAAACTGCTAGGAAGAAGTGAAGACTTCTTGAGTTGT 124283
| ||||| | | | || || | | ||| ||||||||||| || | ||||||||
Sbjct 36161 TGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 36220
Query 124284 TGAATGAAGCATACTGGAAGATAAGACGACCAAAGTAACCGTGTGCTGCTACTATGTTGT 124343
|||||||||| || |||||||||||||| || |||||||||||||| ||||| |||||||
Sbjct 36221 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGT 36280
Query 124344 ATGTTTCTTCTTCTTGTCCGAACTTATAACCATAGTTCTGTGACTCTTGCTCTGTTGTTT 124403
| || |||||||||||||||||||| || || ||| ||||| | ||| || || |
Sbjct 36281 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCT 36340
Query 124404 CTCTGATTAGAGAAGATGTAACAAGAGAACCATGCATTGCTGAGAATAAAGATCCTCCGA 124463
| | ||| ||||| || || || || ||||| |||||||| ||||| | || || ||||
Sbjct 36341 CACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGA 36400
Query 124464 ACATTCCTGCTACTCCTGCCATGTGGAAAGGATGCATTAGAATGTTATGCTCTGCTTGGA 124523
| | || || || || ||||||||| || ||||| || ||||| ||||| || ||||
Sbjct 36401 ATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 36460
Query 124524 AAACGAACATAAAGTTGAAAGTACCTGAGATACCAAGTGGCATACCATCAGAGAATGAAC 124583
| |||| ||| ||||||||||| || || |||||||| ||||| ||||||||||| ||||
Sbjct 36461 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAAC 36520
Query 124584 CCTGACCAAATGGGTATACTAAGAATACAGCGAATGCAGCAGATACTGGTGCTGAATAAG 124643
||||||| | ||||||||| | ||||||||| ||| || | ||| || || || ||||
Sbjct 36521 CCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAG 36580
Query 124644 CAACACAGATCCAAGGACGCATTCCTAATCTGTATGATAGTTCCCACTGTCTTCCCATGT 124703
| ||| |||||||||||||||||||| | | | || || ||||||| | |||||||
Sbjct 36581 CTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGT 36640
Query 124704 ATGCTGAAATACCAATAAGGAAGTGGAAAATTACCAACTGATAAGGACCACCATTATACA 124763
||| |||| || || | |||||| | | | | ||| ||||||||||| || || |
Sbjct 36641 ATGAACAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAA 36700
Query 124764 ACCATTCATCAACAGTTGCTGCTTCCCAGATTGGGTAGAAGTGTAGTCCGATAGCGTTTG 124823
||| ||||||| || |||||||||||||||||||||||||| |||||||||||||| |
Sbjct 36701 GCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAG 36760
Query 124824 ATGATGGAACAACTGCACCAGAGATGATGTTGTTACCATATAAGAAAGAACCCGCTACTG 124883
||| || | || |||||||||||||||||||| || || | | || || | |||||
Sbjct 36761 ATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTG 36820
Query 124884 GTTCTCTGATTCCGTCGATATCGACAGGAGGTGCTGCAATAAATGCAACGATGAAACATG 124943
| || | ||| || |||||||| |||||||| || ||||||||||| |||||||| ||
Sbjct 36821 GCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTG 36880
Query 124944 CTGCTGCTGTGAGTAAGCATGGAATCATTAGAACACCAAACCAACCAACATAAATTCTGT 125003
| |||||| ||||| || ||||||| || || |||||||| | |||| | ||
Sbjct 36881 AAGTTGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGT 36940
Query 125004 TGTTTGTTGATGTTACCCA 125022
| | ||||| || | |||
Sbjct 36941 TCTCAGTTGAAGTAATCCA 36959
Score = 499 bits (552), Expect = 3e-136
Identities = 738/1045 (71%), Gaps = 23/1045 (2%)
Strand=Plus/Minus
Query 122866 TTAAAGTGCGTTACCTCTTGGTAACACTTCTTCTGGGAATACAAAATTCTCATGCGGTTG 122925
|||||| ||||| || | ||| | || || || |||||||||| || ||||| || ||
Sbjct 3011 TTAAAGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAGGTTTTCATGAGGCTG 2952
Query 122926 GTCAACAGATGACATCCATGCTCTCATGCCTTCATTAAGAAGAATGTTCTTCGTATAGAA 122985
|| || || ||||||||| | || ||||| ||||||||||| ||||| || |||||
Sbjct 2951 ATCTTGAGCTGCCATCCATGCACGAATACCTTCGTTAAGAAGAATATTCTTAGTGTAGAA 2892
Query 122986 AGTCTCGAACTCTGGGTCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCT 123045
|| || ||||| || ||||| ||||| | |||||||| ||||| ||||||||||| |
Sbjct 2891 TGTTTCAAACTCAGGATCTTCAGCTGCACGGATCTCTTGTGATACGAAGTCGTATGCACG 2832
Query 123046 GAGGTTAAGTGCTAGACCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAAC 123105
|||||||||||||| ||||| | ||| | | ||| |||| | || | ||||| ||
Sbjct 2831 GAGGTTAAGTGCTAATCCTACAACACCAAGTGCTGACATCCATAACCCTGTTACAGGTAC 2772
Query 123106 GAACAACATAAGGAAGTGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGA 123165
||| | ||||| |||||| | | | |||||||| || || | ||| || ||||||||
Sbjct 2771 GAAAAGCATAAAGAAGTGAAGCCAACGCTTGTTAGAGAAAGCTACACCGAAAATCTGTGA 2712
Query 123166 CCAGAATCTGTTCGCTGTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGC 123225
|||||| | ||| ||||| | ||| ||||| ||||| | || || || | |||||
Sbjct 2711 CCAGAAACGGTTTGCTGTTACCATTGAGTAAGTCTCTTCAGCTTGAGTTGGGTTAAATGC 2652
Query 123226 TCTGAAAGTTGTAGATTGAATCTTACCTTCAGTATATTGTGATGTGTCTTCATACAATGT 123285
| |||||| | ||||| || ||| || |||| | | |||
Sbjct 2651 ACGGAAAGT----GTTTGAA-----CCATCACCAT------------CTTCGAAAAGTGT 2613
Query 123286 GTTCTGCACTGTTGCACCATGAATGGCACATAGTAATGCTCCACCTAGTATTCCTGCAAC 123345
||||| || ||||| || ||||| ||||| || | |||| | || |||| || || ||
Sbjct 2612 GTTCTCTACAGTTGCTCCGTGAATCGCACAAAGAAGTGCTGCTCCAAGTACACCAGCTAC 2553
Query 123346 ACCCATCATGTGAAATGGATTCAATGTAATGTTGTGGAAACCTTGTATGAATAAGATATA 123405
||||||||||| ||||| || | ||| ||||||||| ||||| | ||| | || |
Sbjct 2552 TCCCATCATGTGGAATGGGTTAAGTGTCCAGTTGTGGAACCCTTGGAAGAAAAGAATGAA 2493
Query 123406 ACGAAAGATTGCTGCGACACCGAATGATGGTGCGAAGAACCAACTGTGCTGACCTAGTGG 123465
||| || ||| | || ||||| ||||| ||||| |||||||| | || || |||||
Sbjct 2492 ACGGAAAATTCCCGCTACACCAAATGAAGGTGCAAAGAACCATCCTGATTGTCCAAGTGG 2433
Query 123466 ATAGATCAGAAAGAT-GCTAGTGAAGACTGCGATAACAGCAGAGAATGCGAGTGCGTTGT 123524
|| || || || | | || || || |||||| || |||||||| | |||||||
Sbjct 2432 GTAAATAAGGAATACAGATACA-AATACAGCGATAGGTGCTGAGAATGCAATCGCGTTGT 2374
Query 123525 AAGGTCTAATGCCTACAAGTCCTGCGATCTCAAATTGTCTGAGCATGAAACCTATGAGTC 123584
| || | ||| ||| | ||| || |||||||| | |||||| || || || | ||
Sbjct 2373 ACGGACGAATTTGTACTGCACGTGCAATTTCAAATTGACGGAGCATAAATCCGATTAATC 2314
Query 123585 CAAAGACTCCATGTAATGCTACAAAGTTCCATAGACCTCCGAGTTGTAACCAACGAACGA 123644
| || | || || | |||||| || |||||| || || || || ||||||| ||
Sbjct 2313 CGAATGCACCGTGAAGTGCTACGAATGTCCATAATCCACCAAGCTGACACCAACGTGTGA 2254
Query 123645 ATGATCCTTGTGCTTCAGGTCCCCAAAGGAACATGAGACTATGACCCATTGCGTCACCAG 123704
| ||||||||||| ||||||||||||| | || ||| |||| || | |
Sbjct 2253 ACTCACCTTGTGCTTCTGGTCCCCAAAGGAGAAGAAGTGAGTGAGCCATACTGTTAGATG 2194
Query 123705 GTGTGGAGACTGCTGCTGTTAAGAAGTTTGCTCCCTCAAGATATGAAGATGCAATACCAT 123764
|||| || ||||| | ||| | |||||| ||||||||| |||||| ||| | ||| |
Sbjct 2193 GTGTTGATACTGCCGATGTAAGGAAGTTACATCCCTCAAGGTATGAACTTGCTAAACCGT 2134
Query 123765 GTGTATACCATGATGTAACGAAGGTAGTTCCTAAGAACCAACCACCGATTGATAGATACG 123824
|||| |||||||| || ||||| || ||||| ||||| ||||| | || | || |
Sbjct 2133 GTGTGTACCATGAAGTTACGAATGTTGTTCCAGTAAACCATCCACCAACTGCAAAGTATG 2074
Query 123825 CACAAGGCAGAAGTAAAAGACCAGACCATCCTATGAATACAAAACGATCTCTCTTTAACC 123884
|||| || | | ||||| || ||||| |||| |||||| |||||||| | ||| | ||
Sbjct 2073 CACATGGGAATAATAAAATTCCTGACCAACCTACGAATACGAAACGATCACGCTTAAGCC 2014
Query 123885 AGTCGTCAAGAACATCAAACCAACC 123909
||||||| | |||||||| ||
Sbjct 2013 AGTCGTCTACGTTGTCAAACCATCC 1989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998262487880
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