Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq19 778 0.0
>seq19
Length=72585
Score = 778 bits (862), Expect = 0.0
Identities = 759/975 (78%), Gaps = 2/975 (0%)
Strand=Plus/Minus
Query 26734 GCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGACCA 26793
||||| || | ||| || || || ||||| | ||||| || || || | || || |
Sbjct 11157 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 11098
Query 26794 GCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAGAC 26853
|||||||| | | || ||||| ||||| | ||||| || | |||||| | ||||||
Sbjct 11097 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 11038
Query 26854 TGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAAC 26913
|| ||||||||||| ||||| || ||||||||||| || || | ||| | || ||||||
Sbjct 11037 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 10978
Query 26914 CAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAAT 26973
||||| || | || ||||| || ||||||||||| | ||||||||||||||||||
Sbjct 10977 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 10918
Query 26974 GAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTC 27033
||||| ||||||||||| | ||| |||||||| || ||||| || ||||||||||| |||
Sbjct 10917 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 10858
Query 27034 TCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGG 27093
||||||||||| |||||||| || || ||| ||||| | ||||| |||||||||
Sbjct 10857 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 10798
Query 27094 ACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATACC 27153
| ||| || || || || || |||||||| ||||||||||| || |||||||||||
Sbjct 10797 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 10738
Query 27154 CCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATACA 27213
||||||||||| ||||||||||| |||||||||||||| ||||| || |||||||||||
Sbjct 10737 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 10678
Query 27214 AGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGA 27273
| |||| |||| ||||| ||||| |||||||||||||| |||| ||||||||||| |||
Sbjct 10677 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 10618
Query 27274 CCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTACA 27333
|||| || || |||| |||||| || | || || || || |||||||| || ||||||
Sbjct 10617 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 10558
Query 27334 CAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAAGCA 27393
||||| |||||||| |||||||| | || || ||||||||||| ||||| || | |
Sbjct 10557 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 10498
Query 27394 TAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAACCAC 27453
| || ||||| | |||||| | || | || ||| ||||||||||||| || | ||||
Sbjct 10497 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 10438
Query 27454 TCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAACTT 27513
||||| || || |||||||||||||||||||||||||| || ||||| || || || |
Sbjct 10437 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 10378
Query 27514 GGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTTCA 27573
|||| || |||||||| ||||||||||| || ||||||||||| |||| || || |||
Sbjct 10377 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 10318
Query 27574 CGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAAG-CAGACAGT 27632
|| ||||| || ||||| || || || || || || ||||| || ||||| | || |||
Sbjct 10317 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGA-AGT 10259
Query 27633 TGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTTGTT 27692
||||| | | || |||||||| | ||| ||||||||||| | || | |||||| |
Sbjct 10258 TGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTC 10199
Query 27693 AGTTGATGTCACCCA 27707
|||||| || | |||
Sbjct 10198 AGTTGAAGTAATCCA 10184
Score = 778 bits (862), Expect = 0.0
Identities = 759/975 (78%), Gaps = 2/975 (0%)
Strand=Plus/Plus
Query 26734 GCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGACCA 26793
||||| || | ||| || || || ||||| | ||||| || || || | || || |
Sbjct 35986 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 36045
Query 26794 GCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAGAC 26853
|||||||| | | || ||||| ||||| | ||||| || | |||||| | ||||||
Sbjct 36046 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 36105
Query 26854 TGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAAC 26913
|| ||||||||||| ||||| || ||||||||||| || || | ||| | || ||||||
Sbjct 36106 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 36165
Query 26914 CAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAAT 26973
||||| || | || ||||| || ||||||||||| | ||||||||||||||||||
Sbjct 36166 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 36225
Query 26974 GAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTC 27033
||||| ||||||||||| | ||| |||||||| || ||||| || ||||||||||| |||
Sbjct 36226 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 36285
Query 27034 TCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGG 27093
||||||||||| |||||||| || || ||| ||||| | ||||| |||||||||
Sbjct 36286 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 36345
Query 27094 ACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATACC 27153
| ||| || || || || || |||||||| ||||||||||| || |||||||||||
Sbjct 36346 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 36405
Query 27154 CCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATACA 27213
||||||||||| ||||||||||| |||||||||||||| ||||| || |||||||||||
Sbjct 36406 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 36465
Query 27214 AGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGA 27273
| |||| |||| ||||| ||||| |||||||||||||| |||| ||||||||||| |||
Sbjct 36466 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 36525
Query 27274 CCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTACA 27333
|||| || || |||| |||||| || | || || || || |||||||| || ||||||
Sbjct 36526 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 36585
Query 27334 CAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAAGCA 27393
||||| |||||||| |||||||| | || || ||||||||||| ||||| || | |
Sbjct 36586 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 36645
Query 27394 TAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAACCAC 27453
| || ||||| | |||||| | || | || ||| ||||||||||||| || | ||||
Sbjct 36646 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 36705
Query 27454 TCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAACTT 27513
||||| || || |||||||||||||||||||||||||| || ||||| || || || |
Sbjct 36706 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 36765
Query 27514 GGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTTCA 27573
|||| || |||||||| ||||||||||| || ||||||||||| |||| || || |||
Sbjct 36766 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 36825
Query 27574 CGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGACAGT 27632
|| ||||| || ||||| || || || || || || ||||| || ||||| | || |||
Sbjct 36826 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGA-AGT 36884
Query 27633 TGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTTGTT 27692
||||| | | || |||||||| | ||| ||||||||||| | || | |||||| |
Sbjct 36885 TGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTC 36944
Query 27693 AGTTGATGTCACCCA 27707
|||||| || | |||
Sbjct 36945 AGTTGAAGTAATCCA 36959
Score = 556 bits (616), Expect = 2e-153
Identities = 743/1029 (72%), Gaps = 8/1029 (1%)
Strand=Plus/Minus
Query 23385 AATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCA---ATTACAGGAAAGTTTTCGTGT 23441
||| ||||||| || || | |||||| | |||||| | |||| | |||||| ||
Sbjct 3013 AATTAAAGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAG---GTTTTCATGA 2957
Query 23442 GGTTGGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTG 23501
|| || || || ||||||| |||| | || | ||| | | |||||| || |||
Sbjct 2956 GGCTGATCTTGAGCTGCCATCCATGCACGAATACCTTCGTTAAGAAGAATATTCTTAGTG 2897
Query 23502 TAGAAGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAA 23561
||||| || ||| || | ||||||||| ||||| |||||||| || || || ||
Sbjct 2896 TAGAATGTTTCAAACTCAGGATCTTCAGCTGCACGGATCTCTTGTGATACGAAGTCGTAT 2837
Query 23562 GCACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACA 23621
||||| || ||||| || | || | | |||| | || | ||| | || | |||
Sbjct 2836 GCACGGAGGTTAAGTGCTAATCCTACAACACCAAGTGCTGACATCCATAACCCTGTTACA 2777
Query 23622 GGAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATT 23681
|| || || | |||||||||||| | ||||||||| || || || || ||||| ||
Sbjct 2776 GGTACGAAAAGCATAAAGAAGTGAAGCCAACGCTTGTTAGAGAAAGCTACACCGAAAATC 2717
Query 23682 TGTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCG 23741
|||||||| ||||| |||||||| ||||| || || ||||| || | ||||| | |
Sbjct 2716 TGTGACCAGAAACGGTTTGCTGTTACCATTGAGTAAGTCTCTTCAGCTTGAGTTGGGTTA 2657
Query 23742 AACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACT 23801
|| || |||||||||| || |||||||| | ||||| ||||| ||||| ||
Sbjct 2656 AATGCACGGAAAGTGTTTGAACCATCACCATCTTCGAAAAGTGTGTTCTCTACAGTTGCT 2597
Query 23802 CCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAG 23861
|| ||||| ||| | ||||||||| |||| |||| |||||| ||||||||||| |||||
Sbjct 2596 CCGTGAATCGCACAAAGAAGTGCTGCTCCAAGTACACCAGCTACTCCCATCATGTGGAAT 2537
Query 23862 GGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCA 23921
||||| || |||||||| || || || |||| ||| |||| ||| | |||||| ||||
Sbjct 2536 GGGTTAAGTGTCCAGTTGTGGAACCCTTGGAAGAAAAGAATGAAACGGAAAATTCCCGCT 2477
Query 23922 ACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACA 23981
||||| || || ||||||||||| ||| ||||| | || || || |||||||||
Sbjct 2476 ACACCAAATGAAGGTGCAAAGAACCATCCTGATTGTCCAAGTGGGTAAATAAGGAATACA 2417
Query 23982 GACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATT 24041
|| || |||||||| ||||| | || || |||||||| ||||| ||||| ||| | |
Sbjct 2416 GATACAAATACAGCGATAGGTGCTGAGAATGCAATCGCGTTGTACGGACGAATTTGTACT 2357
Query 24042 AGACGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGA 24101
|||||| | |||||| ||||| | |||||| || || | | | || |||||||| ||
Sbjct 2356 GCACGTGCAATTTCAAATTGACGGAGCATAAATCCGATTAATCCGAATGCACCGTGAAGT 2297
Query 24102 GCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCA 24161
|| || || | ||| | || ||||| || ||| ||| || || ||||| | ||
Sbjct 2296 GCTACGAATGTCCATAATCCACCAAGCTGACACCAACGTGTGAACTCACCTTGTGCTTCT 2237
Query 24162 GGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCC 24221
|| |||||||| |||||||| || ||| ||||| || || || || || || || |
Sbjct 2236 GGTCCCCAAAGGAGAAGAAGTGAGTGAGCCATACTGTTAGATGGTGTTGATACTGCCGAT 2177
Query 24222 GTAAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTA 24281
||||| |||||| |||||||| || ||||| || | || || |||||||| ||
Sbjct 2176 GTAAGGAAGTTACATCCCTCAAGGTATGAACTTGCTAAACCGTGTGTGTACCATGAAGTT 2117
Query 24282 ACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAG-TGGGAAGAAGTAG 24340
|| || | ||| ||||||| ||| || |||| |||| || ||| |||||| || ||
Sbjct 2116 ACGAATGTTGTTCCAGTAAACCATCCACCAACTGCAAAGTATGCACATGGGAATAA-TAA 2058
Query 24341 GAGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTC 24400
| ||| |||||||| || || || || ||||| || |||| ||||||||| | | ||||
Sbjct 2057 AATTCCTGACCAACCTACGAATACGAAACGATCACGCTTAAGCCAGTCGTCTACGTTGTC 1998
Query 24401 AAACCATCC 24409
|||||||||
Sbjct 1997 AAACCATCC 1989
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665494241945080
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