Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10] 19 sequences; 21,109,336 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq19 778 0.0 >seq19 Length=72585 Score = 778 bits (862), Expect = 0.0 Identities = 759/975 (78%), Gaps = 2/975 (0%) Strand=Plus/Minus Query 26734 GCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGACCA 26793 ||||| || | ||| || || || ||||| | ||||| || || || | || || | Sbjct 11157 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 11098 Query 26794 GCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAGAC 26853 |||||||| | | || ||||| ||||| | ||||| || | |||||| | |||||| Sbjct 11097 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 11038 Query 26854 TGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAAC 26913 || ||||||||||| ||||| || ||||||||||| || || | ||| | || |||||| Sbjct 11037 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 10978 Query 26914 CAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAAT 26973 ||||| || | || ||||| || ||||||||||| | |||||||||||||||||| Sbjct 10977 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 10918 Query 26974 GAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTC 27033 ||||| ||||||||||| | ||| |||||||| || ||||| || ||||||||||| ||| Sbjct 10917 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 10858 Query 27034 TCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGG 27093 ||||||||||| |||||||| || || ||| ||||| | ||||| ||||||||| Sbjct 10857 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 10798 Query 27094 ACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATACC 27153 | ||| || || || || || |||||||| ||||||||||| || ||||||||||| Sbjct 10797 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 10738 Query 27154 CCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATACA 27213 ||||||||||| ||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct 10737 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 10678 Query 27214 AGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGA 27273 | |||| |||| ||||| ||||| |||||||||||||| |||| ||||||||||| ||| Sbjct 10677 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 10618 Query 27274 CCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTACA 27333 |||| || || |||| |||||| || | || || || || |||||||| || |||||| Sbjct 10617 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 10558 Query 27334 CAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAAGCA 27393 ||||| |||||||| |||||||| | || || ||||||||||| ||||| || | | Sbjct 10557 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 10498 Query 27394 TAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAACCAC 27453 | || ||||| | |||||| | || | || ||| ||||||||||||| || | |||| Sbjct 10497 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 10438 Query 27454 TCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAACTT 27513 ||||| || || |||||||||||||||||||||||||| || ||||| || || || | Sbjct 10437 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 10378 Query 27514 GGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTTCA 27573 |||| || |||||||| ||||||||||| || ||||||||||| |||| || || ||| Sbjct 10377 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 10318 Query 27574 CGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAAG-CAGACAGT 27632 || ||||| || ||||| || || || || || || ||||| || ||||| | || ||| Sbjct 10317 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGA-AGT 10259 Query 27633 TGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTTGTT 27692 ||||| | | || |||||||| | ||| ||||||||||| | || | |||||| | Sbjct 10258 TGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTC 10199 Query 27693 AGTTGATGTCACCCA 27707 |||||| || | ||| Sbjct 10198 AGTTGAAGTAATCCA 10184 Score = 778 bits (862), Expect = 0.0 Identities = 759/975 (78%), Gaps = 2/975 (0%) Strand=Plus/Plus Query 26734 GCAAGATCCAATGGAAAATTATGGGCGTTCCTTTCGTGAATCACCTCTAATCCAAGACCA 26793 ||||| || | ||| || || || ||||| | ||||| || || || | || || | Sbjct 35986 GCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGAGGTTA 36045 Query 26794 GCACGGTTGAGAACGTCTGCCCAAGTGTTGAGCACACGACCCTGTGAATCAATCACAGAC 26853 |||||||| | | || ||||| ||||| | ||||| || | |||||| | |||||| Sbjct 36046 GCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTACAGAC 36105 Query 26854 TGATTGAAGTTGAAACCGTTGAGATTGAAAGCCATCGTGGATACACCAAGTGCGGTGAAC 26913 || ||||||||||| ||||| || ||||||||||| || || | ||| | || |||||| Sbjct 36106 TGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTGTGAAC 36165 Query 26914 CAGATGCCAACAACGGGCCATGCAGCAAGGAAGAAGTGCAAGGAACGTGAGTTGTTGAAT 26973 ||||| || | || ||||| || ||||||||||| | |||||||||||||||||| Sbjct 36166 CAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGAAT 36225 Query 26974 GAAGCATATTGGAAGATCAAACGACCGAAGTAGCCATGTGCTGCGACGATGTTGTAGGTC 27033 ||||| ||||||||||| | ||| |||||||| || ||||| || ||||||||||| ||| Sbjct 36226 GAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGTAAGTC 36285 Query 27034 TCTTCTTCTTGACCGAACTTATAACCATAGTTCTGTGACTCAGTTTCAGTCGTCTCACGG 27093 ||||||||||| |||||||| || || ||| ||||| | ||||| ||||||||| Sbjct 36286 TCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCTCACGG 36345 Query 27094 ACGAGTGAAGATGTAACCAGACTTCCGTGCATAGCAGAGAAAAGAGATCCACCGAATACC 27153 | ||| || || || || || |||||||| ||||||||||| || ||||||||||| Sbjct 36346 ATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGAATACA 36405 Query 27154 CCAGCAACACCGAGCATGTGGAACGGGTGCATAAGGATATTGTGTTCTGCCTGGAATACA 27213 ||||||||||| ||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct 36406 CCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATACG 36465 Query 27214 AGCATGTAGTTAAAAGTACCAGAGATACCAAGAGGCATAGCATCGGAGAAAGAACCTTGA 27273 | |||| |||| ||||| ||||| |||||||||||||| |||| ||||||||||| ||| Sbjct 36466 ATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAACCCTGA 36525 Query 27274 CCGAAAGGATAGACGAGGAATACTGCACTCGCAGCAGCGACTGGAGCAGAATATGCTACA 27333 |||| || || |||| |||||| || | || || || || |||||||| || |||||| Sbjct 36526 CCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAGCTACA 36585 Query 27334 CAGATCCATGGACGCATACCTAAACGATATGAGAGTTCCCACTCACGTCCCATATAAGCA 27393 ||||| |||||||| |||||||| | || || ||||||||||| ||||| || | | Sbjct 36586 GCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGTATGAA 36645 Query 27394 TAGATGCCGATAAGGAAGTGGAAGACTACCAGTTGGAAAGGACCACCGTTATACAACCAC 27453 | || ||||| | |||||| | || | || ||| ||||||||||||| || | |||| Sbjct 36646 CAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAAGCCAC 36705 Query 27454 TCATCGAGTGATGCTGCTTCCCAGATTGGGTAGAAGTGGAGACCGATTGCATTTGAACTT 27513 ||||| || || |||||||||||||||||||||||||| || ||||| || || || | Sbjct 36706 TCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAGATGTA 36765 Query 27514 GGGACAACTGCACCAGAAATGATGTTGTTGCCATACATAAGTGAACCAGCAACGGGTTCA 27573 |||| || |||||||| ||||||||||| || ||||||||||| |||| || || ||| Sbjct 36766 GGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCTCA 36825 Query 27574 CGAATACCGTCAATATCGACGGGTGGTGCTGCGATGAATGCGACAATGAA-GCAGACAGT 27632 || ||||| || ||||| || || || || || || ||||| || ||||| | || ||| Sbjct 36826 CGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTGA-AGT 36884 Query 27633 TGCTGCTAACAGTGTTGGGATCATCAGTACACCGAACCAACCAACATACAAACGGTTGTT 27692 ||||| | | || |||||||| | ||| ||||||||||| | || | |||||| | Sbjct 36885 TGCTGTAAGTAAAGTAGGGATCATTAATACTCCGAACCAACCGATGTAAAGACGGTTCTC 36944 Query 27693 AGTTGATGTCACCCA 27707 |||||| || | ||| Sbjct 36945 AGTTGAAGTAATCCA 36959 Score = 556 bits (616), Expect = 2e-153 Identities = 743/1029 (72%), Gaps = 8/1029 (1%) Strand=Plus/Minus Query 23385 AATCAAAGAGCATTACCTCTTGGAAGGATTTCCTCA---ATTACAGGAAAGTTTTCGTGT 23441 ||| ||||||| || || | |||||| | |||||| | |||| | |||||| || Sbjct 3013 AATTAAAGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAG---GTTTTCATGA 2957 Query 23442 GGTTGGTCAATAGTCATCATCCATTCACGGAGGCCATTGTTCAACAAAATATTTTTCGTG 23501 || || || || ||||||| |||| | || | ||| | | |||||| || ||| Sbjct 2956 GGCTGATCTTGAGCTGCCATCCATGCACGAATACCTTCGTTAAGAAGAATATTCTTAGTG 2897 Query 23502 TAGAAGGTCTCATACGAACCATCTTCAGCAGCACGAATCTCTTGACTCACAAAATCATAA 23561 ||||| || ||| || | ||||||||| ||||| |||||||| || || || || Sbjct 2896 TAGAATGTTTCAAACTCAGGATCTTCAGCTGCACGGATCTCTTGTGATACGAAGTCGTAT 2837 Query 23562 GCACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAAGAGACCCAAAGACCCATGACA 23621 ||||| || ||||| || | || | | |||| | || | ||| | || | ||| Sbjct 2836 GCACGGAGGTTAAGTGCTAATCCTACAACACCAAGTGCTGACATCCATAACCCTGTTACA 2777 Query 23622 GGAACAAACAACATAAAGAAGTGCAACCAACGCTTATTGCTAAACGCAACCCCGAAGATT 23681 || || || | |||||||||||| | ||||||||| || || || || ||||| || Sbjct 2776 GGTACGAAAAGCATAAAGAAGTGAAGCCAACGCTTGTTAGAGAAAGCTACACCGAAAATC 2717 Query 23682 TGTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTCTCCTCCTCCTGAGTGGAATCG 23741 |||||||| ||||| |||||||| ||||| || || ||||| || | ||||| | | Sbjct 2716 TGTGACCAGAAACGGTTTGCTGTTACCATTGAGTAAGTCTCTTCAGCTTGAGTTGGGTTA 2657 Query 23742 AACGCTTTAAAAGTGTTTGCCTGTTCTCCATCTTCATACAGTGTATTCTCGACAGTAACT 23801 || || |||||||||| || |||||||| | ||||| ||||| ||||| || Sbjct 2656 AATGCACGGAAAGTGTTTGAACCATCACCATCTTCGAAAAGTGTGTTCTCTACAGTTGCT 2597 Query 23802 CCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATACCAGCAACTCCCATCATATGGAAG 23861 || ||||| ||| | ||||||||| |||| |||| |||||| ||||||||||| ||||| Sbjct 2596 CCGTGAATCGCACAAAGAAGTGCTGCTCCAAGTACACCAGCTACTCCCATCATGTGGAAT 2537 Query 23862 GGGTTGAGCGTCCAGTTATGAAAGCCCTGGAGGAAGAGAAGGAACCTGAAAATCGCCGCA 23921 ||||| || |||||||| || || || |||| ||| |||| ||| | |||||| |||| Sbjct 2536 GGGTTAAGTGTCCAGTTGTGGAACCCTTGGAAGAAAAGAATGAAACGGAAAATTCCCGCT 2477 Query 23922 ACACCGAAACTCGGCGCAAAGAACCAAGATGACTGTCCCAAAGGATAGATGAGGAATACA 23981 ||||| || || ||||||||||| ||| ||||| | || || || ||||||||| Sbjct 2476 ACACCAAATGAAGGTGCAAAGAACCATCCTGATTGTCCAAGTGGGTAAATAAGGAATACA 2417 Query 23982 GACACGAATACAGCAATAGGACCAGAAAAAGCAATCGCATTGTAGGGACGGATTCCAATT 24041 || || |||||||| ||||| | || || |||||||| ||||| ||||| ||| | | Sbjct 2416 GATACAAATACAGCGATAGGTGCTGAGAATGCAATCGCGTTGTACGGACGAATTTGTACT 2357 Query 24042 AGACGTGCCAGTTCAAACTGACGTAACATAAAACCTATAAGTGCAAAGGCACCGTGGAGA 24101 |||||| | |||||| ||||| | |||||| || || | | | || |||||||| || Sbjct 2356 GCACGTGCAATTTCAAATTGACGGAGCATAAATCCGATTAATCCGAATGCACCGTGAAGT 2297 Query 24102 GCAACAAAGGACCAAAGCCCTCCAAGTTGGAGCCACCGTTGAAAGTCCCCTTGAGACTCA 24161 || || || | ||| | || ||||| || ||| ||| || || ||||| | || Sbjct 2296 GCTACGAATGTCCATAATCCACCAAGCTGACACCAACGTGTGAACTCACCTTGTGCTTCT 2237 Query 24162 GGACCCCAAAGTAGAAGAAGAGAATGACCCATAGCGTCAGCAGGCGTCGAGACAGCTGCC 24221 || |||||||| |||||||| || ||| ||||| || || || || || || || | Sbjct 2236 GGTCCCCAAAGGAGAAGAAGTGAGTGAGCCATACTGTTAGATGGTGTTGATACTGCCGAT 2177 Query 24222 GTAAGAAAGTTAGCACCCTCAAGATAGGAACTAGCAAGTCCATGGGTGTACCAACTCGTA 24281 ||||| |||||| |||||||| || ||||| || | || || |||||||| || Sbjct 2176 GTAAGGAAGTTACATCCCTCAAGGTATGAACTTGCTAAACCGTGTGTGTACCATGAAGTT 2117 Query 24282 ACAAAAGCTGTGCCAGTAAGCCAACCGCCAATGGCAAGATAAGCAG-TGGGAAGAAGTAG 24340 || || | ||| ||||||| ||| || |||| |||| || ||| |||||| || || Sbjct 2116 ACGAATGTTGTTCCAGTAAACCATCCACCAACTGCAAAGTATGCACATGGGAATAA-TAA 2058 Query 24341 GAGTCCAGACCAACCCACAAAGACAAAGCGATCCCGTTTAACCCAGTCGTCCAAGATGTC 24400 | ||| |||||||| || || || || ||||| || |||| ||||||||| | | |||| Sbjct 2057 AATTCCTGACCAACCTACGAATACGAAACGATCACGCTTAAGCCAGTCGTCTACGTTGTC 1998 Query 24401 AAACCATCC 24409 ||||||||| Sbjct 1997 AAACCATCC 1989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665494241945080