Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Micromonas_20commoda_20[refseq_20GCF_5F000090985.2_202009-04-10]
19 sequences; 21,109,336 total letters
Query= NC_020855.1
Length=192497
Score E
Sequences producing significant alignments: (Bits) Value
seq19 618 6e-172
>seq19
Length=72585
Score = 618 bits (684), Expect = 6e-172
Identities = 717/964 (74%), Gaps = 6/964 (1%)
Strand=Plus/Minus
Query 7886 CAGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTA 7945
||||||| | ||| | |||||||||||| || || | || ||||| ||||||||||| |
Sbjct 11162 CAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGA 11103
Query 7946 AGTTTGCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAA 8005
||| || | ||||| | ||| ||||||| ||| | || || ||| || |
Sbjct 11102 GGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTA 11043
Query 8006 CTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAG 8065
| || ||||| ||||| |||||||||||||| || ||||| || |||||||||||| |
Sbjct 11042 CAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTG 10983
Query 8066 TTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGT 8125
| ||||| | | | ||||| | | |||||||||||||| || | |||||
Sbjct 10982 TGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 10923
Query 8126 TAAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTAT 8185
| || || || || |||||||| | | || ||||| || || ||||| || || || |
Sbjct 10922 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGT 10863
Query 8186 AGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCT 8245
| |||||||||||||| || ||||| || || ||| |||||| | ||||| ||||
Sbjct 10862 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCT 10803
Query 8246 CTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGA 8305
| | ||| ||||| || || || | ||||||||||| ||| ||| ||||| |||||||
Sbjct 10802 CACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGA 10743
Query 8306 ACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGA 8365
| | ||| || || || ||| ||||| || |||||||| ||||| ||||| || ||||
Sbjct 10742 ATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 10683
Query 8366 ATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAAC 8425
|||||| ||||||||| || || ||||||||||| |||||||||||||||||||| ||||
Sbjct 10682 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAAC 10623
Query 8426 CCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATG 8485
||||||| | ||| ||||| | ||| || || || || | ||| |||||| || |
Sbjct 10622 CCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAG 10563
Query 8486 CTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGT 8545
||||| ||||| || | ||| ||||| ||| | || | |||||||| | ||||||||
Sbjct 10562 CTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGT 10503
Query 8546 AAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACA 8605
| | | ||||||| || | |||||| | | | | ||| || ||||| ||||| || |
Sbjct 10502 ATGAACAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAA 10443
Query 8606 ACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGG 8665
||||||||| | | || |||||||| || || |||||||| | ||| |||||||| |
Sbjct 10442 GCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAG 10383
Query 8666 AAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAG 8725
| | || | |||||||||||||||||||||||||| ||||| | ||| || | || |
Sbjct 10382 ATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTG 10323
Query 8726 GTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAA---GC 8782
| ||||| ||||| |||||||| ||||| ||||||||||||||||| ||||| ||
Sbjct 10322 GCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTG 10263
Query 8783 AAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTC 8842
|||| || | | || ||| ||| ||||||| ||||| |||||||||| ||||| |
Sbjct 10262 AAGTTGCTGTAAGTA--AAG-TAGGGATCATTAATACTCCGAACCAACCGATGTAAAGAC 10206
Query 8843 TGTT 8846
|||
Sbjct 10205 GGTT 10202
Score = 618 bits (684), Expect = 6e-172
Identities = 717/964 (74%), Gaps = 6/964 (1%)
Strand=Plus/Plus
Query 7886 CAGATGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTA 7945
||||||| | ||| | |||||||||||| || || | || ||||| ||||||||||| |
Sbjct 35981 CAGATGCAAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCGA 36040
Query 7946 AGTTTGCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAA 8005
||| || | ||||| | ||| ||||||| ||| | || || ||| || |
Sbjct 36041 GGTTAGCACGGTTTACGATATCAGCCCATGTGTTAATTACACGTCCGTTTGAATCTACTA 36100
Query 8006 CTGATTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAG 8065
| || ||||| ||||| |||||||||||||| || ||||| || |||||||||||| |
Sbjct 36101 CAGACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTTGAAATACCCATAGCTG 36160
Query 8066 TTAACCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAAGACTTCTACTGTTGT 8125
| ||||| | | | ||||| | | |||||||||||||| || | |||||
Sbjct 36161 TGAACCAGATTCCCATTACTGGCCAGATTGCGAGGAAGAAGTGGAGTGAACGTGAGTTGT 36220
Query 8126 TAAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTAT 8185
| || || || || |||||||| | | || ||||| || || ||||| || || || |
Sbjct 36221 TGAATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGTGCAGCTACGATGTTGT 36280
Query 8186 AGGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCT 8245
| |||||||||||||| || ||||| || || ||| |||||| | ||||| ||||
Sbjct 36281 AAGTCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTTGCAGACTCGTTCTCAGTAGTCT 36340
Query 8246 CTCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGA 8305
| | ||| ||||| || || || | ||||||||||| ||| ||| ||||| |||||||
Sbjct 36341 CACGGATGAGAGATGAAGTTACGAGTGAACCGTGCATTGCAGAGAAAAGTGAACCACCGA 36400
Query 8306 ACATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGA 8365
| | ||| || || || ||| ||||| || |||||||| ||||| ||||| || ||||
Sbjct 36401 ATACACCAGCAACACCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGA 36460
Query 8366 ATACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAAC 8425
|||||| ||||||||| || || ||||||||||| |||||||||||||||||||| ||||
Sbjct 36461 ATACGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATTCCATCAGAGAAAGAAC 36520
Query 8426 CCTGACCAAATGGATATACTAAGAACACTGCGAAAGCAGCAGATACTGGAGCACTATATG 8485
||||||| | ||| ||||| | ||| || || || || | ||| |||||| || |
Sbjct 36521 CCTGACCGATTGGGTATACGATGAATACAGCTGTTGCTGCTGCTACAGGAGCAGAGTAAG 36580
Query 8486 CTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCATGT 8545
||||| ||||| || | ||| ||||| ||| | || | |||||||| | ||||||||
Sbjct 36581 CTACAGCAATCCAAGGACGCATTCCTAAACGGAAAGAAAGCTCCCACTCACGACCCATGT 36640
Query 8546 AAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATACA 8605
| | | ||||||| || | |||||| | | | | ||| || ||||| ||||| || |
Sbjct 36641 ATGAACAAATTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGACCACCGTTGTAAA 36700
Query 8606 ACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTTGG 8665
||||||||| | | || |||||||| || || |||||||| | ||| |||||||| |
Sbjct 36701 GCCACTCATCAAGAGAAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTAG 36760
Query 8666 AAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAACAG 8725
| | || | |||||||||||||||||||||||||| ||||| | ||| || | || |
Sbjct 36761 ATGTAGGGATTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTG 36820
Query 8726 GTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAA---GC 8782
| ||||| ||||| |||||||| ||||| ||||||||||||||||| ||||| ||
Sbjct 36821 GCTCACGGATACCATCGATATCTACAGGAGGAGCAGCAATAAATGCTACGATGAATACTG 36880
Query 8783 AAGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTC 8842
|||| || | | || ||| ||| ||||||| ||||| |||||||||| ||||| |
Sbjct 36881 AAGTTGCTGTAAGTA--AAG-TAGGGATCATTAATACTCCGAACCAACCGATGTAAAGAC 36937
Query 8843 TGTT 8846
|||
Sbjct 36938 GGTT 36941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 615862253732680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |